RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
CDC42BPA-205ENST00000366769 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
CDC42BPA-205ENST00000366769 MYT1Q01538 1121 aa18.22■□□□□ 0.51
CDC42BPA-205ENST00000366769 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
CDC42BPA-205ENST00000366769 ERICH6Q7L0X2 663 aa17.45■□□□□ 0.38
CDC42BPA-205ENST00000366769 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
CDC42BPA-205ENST00000366769 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
CDC42BPA-205ENST00000366769 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
CDC42BPA-205ENST00000366769 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
CDC42BPA-205ENST00000366769 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
CDC42BPA-205ENST00000366769 HRCP23327 699 aa16.96■□□□□ 0.31
CDC42BPA-205ENST00000366769 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
CDC42BPA-205ENST00000366769 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPA-205ENST00000366769 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
CDC42BPA-205ENST00000366769 APLP2Q06481 763 aa16.86■□□□□ 0.29
CDC42BPA-205ENST00000366769 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPA-205ENST00000366769 NEFLP07196 543 aa16.71■□□□□ 0.27
CDC42BPA-205ENST00000366769 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPA-205ENST00000366769 GTF3C3Q9Y5Q9 886 aa16.53■□□□□ 0.24
CDC42BPA-205ENST00000366769 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
CDC42BPA-205ENST00000366769 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
CDC42BPA-205ENST00000366769 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
CDC42BPA-205ENST00000366769 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
CDC42BPA-205ENST00000366769 BCANQ96GW7 911 aa16.3■□□□□ 0.2
CDC42BPA-205ENST00000366769 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
CDC42BPA-205ENST00000366769 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.19
CDC42BPA-205ENST00000366769 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
CDC42BPA-205ENST00000366769 ACIN1Q9UKV3 1341 aaKnown RBP16.18■□□□□ 0.18
CDC42BPA-205ENST00000366769 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
CDC42BPA-205ENST00000366769 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
CDC42BPA-205ENST00000366769 POLR3GLQ9BT43 218 aa16.1■□□□□ 0.17
CDC42BPA-205ENST00000366769 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
CDC42BPA-205ENST00000366769 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.15
CDC42BPA-205ENST00000366769 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
CDC42BPA-205ENST00000366769 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
CDC42BPA-205ENST00000366769 NISCHQ9Y2I1 1504 aa15.93■□□□□ 0.14
CDC42BPA-205ENST00000366769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
CDC42BPA-205ENST00000366769 GLIPR1L2Q4G1C9 344 aa15.9■□□□□ 0.14
CDC42BPA-205ENST00000366769 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
CDC42BPA-205ENST00000366769 CLSPNQ9HAW4 1339 aa15.86■□□□□ 0.13
CDC42BPA-205ENST00000366769 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
CDC42BPA-205ENST00000366769 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
CDC42BPA-205ENST00000366769 NBR1Q14596 966 aa15.84■□□□□ 0.13
CDC42BPA-205ENST00000366769 ANP32EQ9BTT0 268 aa15.77■□□□□ 0.11
CDC42BPA-205ENST00000366769 CDK11AQ9UQ88 783 aaPredicted RBP15.74■□□□□ 0.11
CDC42BPA-205ENST00000366769 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
CDC42BPA-205ENST00000366769 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
CDC42BPA-205ENST00000366769 ITGAEP38570 1179 aa15.69■□□□□ 0.1
CDC42BPA-205ENST00000366769 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
CDC42BPA-205ENST00000366769 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
CDC42BPA-205ENST00000366769 NPM2Q86SE8 214 aaKnown RBP15.62■□□□□ 0.09
CDC42BPA-205ENST00000366769 ANP32AP39687 249 aaKnown RBP15.59■□□□□ 0.09
CDC42BPA-205ENST00000366769 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
CDC42BPA-205ENST00000366769 SLC24A1O60721 1099 aa15.52■□□□□ 0.07
CDC42BPA-205ENST00000366769 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.07
CDC42BPA-205ENST00000366769 ARXQ96QS3 562 aa15.51■□□□□ 0.07
CDC42BPA-205ENST00000366769 FKBP8Q14318 412 aa15.47■□□□□ 0.07
CDC42BPA-205ENST00000366769 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
CDC42BPA-205ENST00000366769 CCDC136Q96JN2 1154 aa15.46■□□□□ 0.06
CDC42BPA-205ENST00000366769 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
CDC42BPA-205ENST00000366769 DEKP35659 375 aaKnown RBP15.32■□□□□ 0.04
CDC42BPA-205ENST00000366769 AMER1Q5JTC6 1135 aaPredicted RBP15.3■□□□□ 0.04
CDC42BPA-205ENST00000366769 CCDC180Q9P1Z9 1646 aa15.3■□□□□ 0.04
CDC42BPA-205ENST00000366769 NAP1L5Q96NT1 182 aaPredicted RBP15.26■□□□□ 0.03
CDC42BPA-205ENST00000366769 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
CDC42BPA-205ENST00000366769 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
CDC42BPA-205ENST00000366769 NEFMP07197 916 aa15.22■□□□□ 0.03
CDC42BPA-205ENST00000366769 ANP32CO43423 234 aa15.2■□□□□ 0.02
CDC42BPA-205ENST00000366769 ARID4BQ4LE39 1312 aaPredicted RBP15.16■□□□□ 0.02
CDC42BPA-205ENST00000366769 MIER1Q8N108 512 aa15.15■□□□□ 0.02
CDC42BPA-205ENST00000366769 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
CDC42BPA-205ENST00000366769 DCAF1Q9Y4B6 1507 aa15.13■□□□□ 0.01
CDC42BPA-205ENST00000366769 ZNF326Q5BKZ1 582 aaKnown RBP15.13■□□□□ 0.01
CDC42BPA-205ENST00000366769 ANP32BQ92688 251 aaKnown RBP15.13■□□□□ 0.01
CDC42BPA-205ENST00000366769 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0.01
CDC42BPA-205ENST00000366769 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
CDC42BPA-205ENST00000366769 TRIM52Q96A61 297 aa15.06■□□□□ 0
CDC42BPA-205ENST00000366769 HSP90AA1P07900 732 aaKnown RBP15.06■□□□□ 0
CDC42BPA-205ENST00000366769 A0A0U1RQG5 324 aaPredicted RBP15.05■□□□□ 0
CDC42BPA-205ENST00000366769 FAM50AQ14320 339 aaKnown RBP15.04■□□□□ -0
CDC42BPA-205ENST00000366769 CDK11BP21127 795 aaKnown RBP15.04■□□□□ -0
CDC42BPA-205ENST00000366769 ARID3AQ99856 593 aa15.03■□□□□ -0
CDC42BPA-205ENST00000366769 NOP58Q9Y2X3 529 aaKnown RBP15.03■□□□□ -0
CDC42BPA-205ENST00000366769 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
CDC42BPA-205ENST00000366769 PKNOX2Q96KN3 472 aa14.97□□□□□ -0.01
CDC42BPA-205ENST00000366769 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
CDC42BPA-205ENST00000366769 HNRNPUQ00839 825 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDC42BPA-205ENST00000366769 PODXL2Q9NZ53 605 aa14.92□□□□□ -0.02
CDC42BPA-205ENST00000366769 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
CDC42BPA-205ENST00000366769 VSIG10Q8N0Z9 540 aa14.89□□□□□ -0.03
CDC42BPA-205ENST00000366769 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
CDC42BPA-205ENST00000366769 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
CDC42BPA-205ENST00000366769 TSHZ2Q9NRE2 1034 aa14.87□□□□□ -0.03
CDC42BPA-205ENST00000366769 RBM19Q9Y4C8 960 aaKnown RBP14.87□□□□□ -0.03
CDC42BPA-205ENST00000366769 TULP1O00294 542 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPA-205ENST00000366769 TRIM44Q96DX7 344 aaPredicted RBP14.82□□□□□ -0.04
CDC42BPA-205ENST00000366769 A0A0G2JS52 829 aa14.82□□□□□ -0.04
CDC42BPA-205ENST00000366769 SALL2Q9Y467 1007 aaPredicted RBP14.77□□□□□ -0.04
CDC42BPA-205ENST00000366769 DDX10Q13206 875 aaKnown RBP14.77□□□□□ -0.04
CDC42BPA-205ENST00000366769 UPF2Q9HAU5 1272 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms