RNA–Protein interactions for RNA: ENST00000365039.1

RNU6-590P-201, Transcript of RNA, U6 small nuclear 590, pseudogene, humanhuman

BASIC

Gene RNU6-590P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-590P-201ENST00000365039 AEBP2Q6ZN18 517 aaPredicted RBP12.7□□□□□ -0.38
RNU6-590P-201ENST00000365039 POTEDQ86YR6 584 aa12.05□□□□□ -0.48
RNU6-590P-201ENST00000365039 CHIC1Q5VXU3 224 aa11.62□□□□□ -0.55
RNU6-590P-201ENST00000365039 SENP3Q9H4L4 574 aaPredicted RBP10.83□□□□□ -0.68
RNU6-590P-201ENST00000365039 PHF23Q9BUL5 403 aaPredicted RBP10.6□□□□□ -0.71
RNU6-590P-201ENST00000365039 FOXD1Q16676 465 aa10.38□□□□□ -0.75
RNU6-590P-201ENST00000365039 MSH5O43196 834 aa10.03□□□□□ -0.8
RNU6-590P-201ENST00000365039 CACNB1Q02641 598 aaPredicted RBP9.42□□□□□ -0.9
RNU6-590P-201ENST00000365039 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
RNU6-590P-201ENST00000365039 POTEHQ6S545 545 aa9.15□□□□□ -0.94
RNU6-590P-201ENST00000365039 PPP6R1Q9UPN7 881 aa8.82□□□□□ -1
RNU6-590P-201ENST00000365039 ADRA2BP18089 450 aa8.68□□□□□ -1.02
RNU6-590P-201ENST00000365039 RNF39Q9H2S5 420 aa8.53□□□□□ -1.04
RNU6-590P-201ENST00000365039 DMRT2Q9Y5R5 561 aa8.45□□□□□ -1.06
RNU6-590P-201ENST00000365039 MAPK8IP2Q13387 824 aaPredicted RBP8.39□□□□□ -1.07
RNU6-590P-201ENST00000365039 C1QBPQ07021 282 aaKnown RBP8.25□□□□□ -1.09
RNU6-590P-201ENST00000365039 DCAF8L1A6NGE4 600 aa8.16□□□□□ -1.1
RNU6-590P-201ENST00000365039 PLSCR2Q9NRY7 297 aa8.08□□□□□ -1.12
RNU6-590P-201ENST00000365039 SP7Q8TDD2 431 aaPredicted RBP7.98□□□□□ -1.13
RNU6-590P-201ENST00000365039 PLPPR3Q6T4P5 718 aa7.94□□□□□ -1.14
RNU6-590P-201ENST00000365039 SCAF1Q9H7N4 1312 aaKnown RBP7.71□□□□□ -1.18
RNU6-590P-201ENST00000365039 HOXD11P31277 338 aaPredicted RBP7.65□□□□□ -1.18
RNU6-590P-201ENST00000365039 DSG3P32926 999 aa7.59□□□□□ -1.19
RNU6-590P-201ENST00000365039 CHRDL2Q6WN34 429 aa7.57□□□□□ -1.2
RNU6-590P-201ENST00000365039 DNAJC5BQ9UF47 199 aa7.51□□□□□ -1.21
RNU6-590P-201ENST00000365039 LHX8Q68G74 356 aa7.47□□□□□ -1.21
RNU6-590P-201ENST00000365039 SPINK5Q9NQ38 1064 aaPredicted RBP7.36□□□□□ -1.23
RNU6-590P-201ENST00000365039 HAX1O00165 279 aa7.32□□□□□ -1.24
RNU6-590P-201ENST00000365039 EVX2Q03828 476 aa7.31□□□□□ -1.24
RNU6-590P-201ENST00000365039 CAPN15O75808 1086 aa7.3□□□□□ -1.24
RNU6-590P-201ENST00000365039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.24□□□□□ -1.25
RNU6-590P-201ENST00000365039 RNF216Q9NWF9 866 aaPredicted RBP7.22□□□□□ -1.25
RNU6-590P-201ENST00000365039 PIP4P2Q8N4L2 257 aa7.16□□□□□ -1.26
RNU6-590P-201ENST00000365039 RBM42Q9BTD8 480 aaKnown RBP7.13□□□□□ -1.27
RNU6-590P-201ENST00000365039 POTEMA6NI47 508 aa7.12□□□□□ -1.27
RNU6-590P-201ENST00000365039 ABCB7O75027 752 aa7.1□□□□□ -1.27
RNU6-590P-201ENST00000365039 POTEGQ6S5H5 508 aa7.05□□□□□ -1.28
RNU6-590P-201ENST00000365039 U3KPZ7 1027 aaPredicted RBP7.05□□□□□ -1.28
RNU6-590P-201ENST00000365039 CNKSR2Q8WXI2 1034 aa6.96□□□□□ -1.3
RNU6-590P-201ENST00000365039 GABBR2O75899 941 aa6.95□□□□□ -1.3
RNU6-590P-201ENST00000365039 TRHP20396 242 aaPredicted RBP6.91□□□□□ -1.3
RNU6-590P-201ENST00000365039 PCDH10Q9P2E7 1040 aa6.91□□□□□ -1.3
RNU6-590P-201ENST00000365039 FXR2P51116 673 aaKnown RBP eCLIP6.9□□□□□ -1.3
RNU6-590P-201ENST00000365039 POTEIP0CG38 1075 aa6.88□□□□□ -1.31
RNU6-590P-201ENST00000365039 PPP4R3CPQ6ZMV5 832 aa6.87□□□□□ -1.31
RNU6-590P-201ENST00000365039 OTUD5Q96G74 571 aa6.81□□□□□ -1.32
RNU6-590P-201ENST00000365039 REM2Q8IYK8 340 aaPredicted RBP6.76□□□□□ -1.33
RNU6-590P-201ENST00000365039 AKT1S1Q96B36 256 aa6.75□□□□□ -1.33
RNU6-590P-201ENST00000365039 PITPNM1O00562 1244 aa6.74□□□□□ -1.33
RNU6-590P-201ENST00000365039 ZNF219Q9P2Y4 722 aaPredicted RBP6.74□□□□□ -1.33
RNU6-590P-201ENST00000365039 C19orf67A6NJJ6 358 aa6.72□□□□□ -1.33
RNU6-590P-201ENST00000365039 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
RNU6-590P-201ENST00000365039 POTEB2H3BUK9 544 aa6.64□□□□□ -1.35
RNU6-590P-201ENST00000365039 PRKAR2AP13861 404 aaKnown RBP6.52□□□□□ -1.37
RNU6-590P-201ENST00000365039 MMRN1Q13201 1228 aa6.49□□□□□ -1.37
RNU6-590P-201ENST00000365039 CDAN1Q8IWY9 1227 aa6.48□□□□□ -1.37
RNU6-590P-201ENST00000365039 APLP2Q06481 763 aa6.46□□□□□ -1.38
RNU6-590P-201ENST00000365039 FAM163AQ96GL9 167 aaPredicted RBP6.46□□□□□ -1.38
RNU6-590P-201ENST00000365039 POLA2Q14181 598 aa6.44□□□□□ -1.38
RNU6-590P-201ENST00000365039 DCBLD2Q96PD2 775 aa6.41□□□□□ -1.38
RNU6-590P-201ENST00000365039 SPNS2Q8IVW8 549 aa6.37□□□□□ -1.39
RNU6-590P-201ENST00000365039 POTEJP0CG39 1038 aa6.35□□□□□ -1.39
RNU6-590P-201ENST00000365039 OSCARQ8IYS5 282 aa6.33□□□□□ -1.4
RNU6-590P-201ENST00000365039 SLC4A2P04920 1241 aa6.26□□□□□ -1.41
RNU6-590P-201ENST00000365039 CHADLQ6NUI6 762 aa6.26□□□□□ -1.41
RNU6-590P-201ENST00000365039 CD44P16070 742 aaKnown RBP6.22□□□□□ -1.41
RNU6-590P-201ENST00000365039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.2□□□□□ -1.42
RNU6-590P-201ENST00000365039 HNRNPUL2Q1KMD3 747 aaKnown RBP6.2□□□□□ -1.42
RNU6-590P-201ENST00000365039 CLCN6P51797 869 aa6.19□□□□□ -1.42
RNU6-590P-201ENST00000365039 PELP1Q8IZL8 1130 aaKnown RBP6.19□□□□□ -1.42
RNU6-590P-201ENST00000365039 NPM3O75607 178 aaKnown RBP6.18□□□□□ -1.42
RNU6-590P-201ENST00000365039 GALR2O43603 387 aaPredicted RBP6.16□□□□□ -1.42
RNU6-590P-201ENST00000365039 SAMD1Q6SPF0 538 aaPredicted RBP6.16□□□□□ -1.42
RNU6-590P-201ENST00000365039 CLEC11AQ9Y240 323 aa6.16□□□□□ -1.42
RNU6-590P-201ENST00000365039 MAMSTRQ6ZN01 415 aa6.09□□□□□ -1.43
RNU6-590P-201ENST00000365039 NCBP3Q53F19 620 aaKnown RBP6.08□□□□□ -1.44
RNU6-590P-201ENST00000365039 ZNF579Q8NAF0 562 aaKnown RBP6.06□□□□□ -1.44
RNU6-590P-201ENST00000365039 METRNQ9UJH8 293 aa6.06□□□□□ -1.44
RNU6-590P-201ENST00000365039 ZBTB12Q9Y330 459 aaPredicted RBP6.05□□□□□ -1.44
RNU6-590P-201ENST00000365039 ST18O60284 1047 aa6.03□□□□□ -1.44
RNU6-590P-201ENST00000365039 SPDYE1Q8NFV5 336 aaPredicted RBP6.03□□□□□ -1.44
RNU6-590P-201ENST00000365039 SCUBE2Q9NQ36 999 aa6.03□□□□□ -1.44
RNU6-590P-201ENST00000365039 ZRANB1Q9UGI0 708 aa5.94□□□□□ -1.46
RNU6-590P-201ENST00000365039 FARP1Q9Y4F1 1045 aaPredicted RBP5.94□□□□□ -1.46
RNU6-590P-201ENST00000365039 C7P10643 843 aa5.92□□□□□ -1.46
RNU6-590P-201ENST00000365039 SLC39A7Q92504 469 aa5.91□□□□□ -1.46
RNU6-590P-201ENST00000365039 POTEFA5A3E0 1075 aa5.89□□□□□ -1.47
RNU6-590P-201ENST00000365039 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
RNU6-590P-201ENST00000365039 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
RNU6-590P-201ENST00000365039 ASTLQ6HA08 431 aaPredicted RBP5.87□□□□□ -1.47
RNU6-590P-201ENST00000365039 ATMINO43313 823 aaPredicted RBP5.85□□□□□ -1.47
RNU6-590P-201ENST00000365039 SPDYE2BA6NHP3 402 aa5.83□□□□□ -1.48
RNU6-590P-201ENST00000365039 PRR29P0C7W0 189 aa5.83□□□□□ -1.48
RNU6-590P-201ENST00000365039 SPDYE6P0CI01 402 aa5.83□□□□□ -1.48
RNU6-590P-201ENST00000365039 SPDYE2Q495Y8 402 aa5.83□□□□□ -1.48
RNU6-590P-201ENST00000365039 MARVELD3Q96A59 401 aa5.82□□□□□ -1.48
RNU6-590P-201ENST00000365039 PHF12Q96QT6 1004 aa5.82□□□□□ -1.48
RNU6-590P-201ENST00000365039 ATF5Q9Y2D1 282 aaPredicted RBP5.8□□□□□ -1.48
RNU6-590P-201ENST00000365039 POTEB3A0JP26 581 aa5.76□□□□□ -1.49
RNU6-590P-201ENST00000365039 POTEBQ6S5H4 581 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms