RNA–Protein interactions for RNA: ENST00000364472.1

RNU4-38P-201, Transcript of RNA, U4 small nuclear 38, pseudogene, humanhuman

BASIC

Gene RNU4-38P, Length 129 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-38P-201ENST00000364472 NISCHQ9Y2I1 1504 aa2.47□□□□□ -2.01
RNU4-38P-201ENST00000364472 CCDC180Q9P1Z9 1646 aa2.24□□□□□ -2.05
RNU4-38P-201ENST00000364472 UNC13AQ9UPW8 1703 aa2.09□□□□□ -2.07
RNU4-38P-201ENST00000364472 ZCCHC6Q5VYS8 1495 aaKnown RBP2.07□□□□□ -2.08
RNU4-38P-201ENST00000364472 ABCC9O60706 1549 aa2.06□□□□□ -2.08
RNU4-38P-201ENST00000364472 DCAF1Q9Y4B6 1507 aa2.06□□□□□ -2.08
RNU4-38P-201ENST00000364472 MYO15BQ96JP2 1530 aa2.05□□□□□ -2.08
RNU4-38P-201ENST00000364472 NACADO15069 1562 aa2.05□□□□□ -2.08
RNU4-38P-201ENST00000364472 RB1CC1Q8TDY2 1594 aa2.04□□□□□ -2.08
RNU4-38P-201ENST00000364472 SCRIBQ14160 1630 aa1.99□□□□□ -2.09
RNU4-38P-201ENST00000364472 BICRAQ9NZM4 1560 aa1.99□□□□□ -2.09
RNU4-38P-201ENST00000364472 SHROOM4Q9ULL8 1493 aa1.96□□□□□ -2.1
RNU4-38P-201ENST00000364472 DCAF8L2P0C7V8 631 aa1.95□□□□□ -2.1
RNU4-38P-201ENST00000364472 SMARCA4P51532 1647 aa1.93□□□□□ -2.1
RNU4-38P-201ENST00000364472 EIF4G1Q04637 1599 aaKnown RBP1.93□□□□□ -2.1
RNU4-38P-201ENST00000364472 PRDM2Q13029 1718 aa1.92□□□□□ -2.1
RNU4-38P-201ENST00000364472 CC2D2AQ9P2K1 1620 aa1.91□□□□□ -2.1
RNU4-38P-201ENST00000364472 WIZO95785 1651 aa1.91□□□□□ -2.1
RNU4-38P-201ENST00000364472 PEG3Q9GZU2 1588 aa1.91□□□□□ -2.1
RNU4-38P-201ENST00000364472 BAZ1AQ9NRL2 1556 aaPredicted RBP1.91□□□□□ -2.1
RNU4-38P-201ENST00000364472 MROH2BQ7Z745 1585 aa1.9□□□□□ -2.1
RNU4-38P-201ENST00000364472 CECR2Q9BXF3 1484 aa1.9□□□□□ -2.11
RNU4-38P-201ENST00000364472 SMARCA2P51531 1590 aa1.89□□□□□ -2.11
RNU4-38P-201ENST00000364472 PABPN1Q86U42 306 aaKnown RBP eCLIP1.89□□□□□ -2.11
RNU4-38P-201ENST00000364472 HMGXB3Q12766 1538 aa1.89□□□□□ -2.11
RNU4-38P-201ENST00000364472 RSF1Q96T23 1441 aaPredicted RBP1.88□□□□□ -2.11
RNU4-38P-201ENST00000364472 ATAD2BQ9ULI0 1458 aa1.88□□□□□ -2.11
RNU4-38P-201ENST00000364472 TOP2AP11388 1531 aaKnown RBP1.87□□□□□ -2.11
RNU4-38P-201ENST00000364472 NCAPD3P42695 1498 aa1.87□□□□□ -2.11
RNU4-38P-201ENST00000364472 BAZ1BQ9UIG0 1483 aaKnown RBP1.86□□□□□ -2.11
RNU4-38P-201ENST00000364472 KIF21AQ7Z4S6 1674 aa1.86□□□□□ -2.11
RNU4-38P-201ENST00000364472 LAMC3Q9Y6N6 1575 aa1.84□□□□□ -2.12
RNU4-38P-201ENST00000364472 DNAJC5BQ9UF47 199 aa1.83□□□□□ -2.12
RNU4-38P-201ENST00000364472 CCDC88BA6NC98 1476 aa1.82□□□□□ -2.12
RNU4-38P-201ENST00000364472 THOC2Q8NI27 1593 aaKnown RBP1.82□□□□□ -2.12
RNU4-38P-201ENST00000364472 WDR97A6NE52 1622 aa1.82□□□□□ -2.12
RNU4-38P-201ENST00000364472 BIVM-ERCC5R4GMW8 1640 aa1.82□□□□□ -2.12
RNU4-38P-201ENST00000364472 CFTRP13569 1480 aa1.82□□□□□ -2.12
RNU4-38P-201ENST00000364472 NESP48681 1621 aa1.8□□□□□ -2.12
RNU4-38P-201ENST00000364472 SUPT5HO00267 1087 aaKnown RBP1.8□□□□□ -2.12
RNU4-38P-201ENST00000364472 WDR62O43379 1518 aa1.8□□□□□ -2.12
RNU4-38P-201ENST00000364472 DNMBPQ6XZF7 1577 aa1.8□□□□□ -2.12
RNU4-38P-201ENST00000364472 TOP2BQ02880 1626 aa1.8□□□□□ -2.12
RNU4-38P-201ENST00000364472 PBRM1Q86U86 1689 aa1.8□□□□□ -2.12
RNU4-38P-201ENST00000364472 CADPSQ9ULU8 1353 aa1.79□□□□□ -2.12
RNU4-38P-201ENST00000364472 FANCD2Q9BXW9 1451 aa1.79□□□□□ -2.12
RNU4-38P-201ENST00000364472 CEP164Q9UPV0 1460 aa1.79□□□□□ -2.12
RNU4-38P-201ENST00000364472 CUX1P39880 1505 aa1.79□□□□□ -2.12
RNU4-38P-201ENST00000364472 SYNJ1O43426 1573 aa1.79□□□□□ -2.12
RNU4-38P-201ENST00000364472 ABCC8Q09428 1581 aa1.79□□□□□ -2.12
RNU4-38P-201ENST00000364472 TARBP1Q13395 1621 aaKnown RBP1.78□□□□□ -2.12
RNU4-38P-201ENST00000364472 URB2Q14146 1524 aaKnown RBP1.78□□□□□ -2.12
RNU4-38P-201ENST00000364472 TOPBP1Q92547 1522 aa1.78□□□□□ -2.12
RNU4-38P-201ENST00000364472 MRC2Q9UBG0 1479 aa1.78□□□□□ -2.12
RNU4-38P-201ENST00000364472 CHD1O14646 1710 aa1.77□□□□□ -2.13
RNU4-38P-201ENST00000364472 ABCA5Q8WWZ7 1642 aa1.77□□□□□ -2.13
RNU4-38P-201ENST00000364472 PDS5BQ9NTI5 1447 aa1.77□□□□□ -2.13
RNU4-38P-201ENST00000364472 CTTNBP2Q8WZ74 1663 aa1.77□□□□□ -2.13
RNU4-38P-201ENST00000364472 EIF4G3O43432 1585 aaKnown RBP1.76□□□□□ -2.13
RNU4-38P-201ENST00000364472 POLA1P09884 1462 aaPredicted RBP1.76□□□□□ -2.13
RNU4-38P-201ENST00000364472 ERCC6Q03468 1493 aa1.76□□□□□ -2.13
RNU4-38P-201ENST00000364472 FGD5Q6ZNL6 1462 aa1.76□□□□□ -2.13
RNU4-38P-201ENST00000364472 WRNQ14191 1432 aaPredicted RBP eCLIP1.76□□□□□ -2.13
RNU4-38P-201ENST00000364472 CUL7Q14999 1698 aa1.76□□□□□ -2.13
RNU4-38P-201ENST00000364472 CUX2O14529 1486 aa1.75□□□□□ -2.13
RNU4-38P-201ENST00000364472 ADAMTS12P58397 1594 aa1.75□□□□□ -2.13
RNU4-38P-201ENST00000364472 ABCA10Q8WWZ4 1543 aa1.75□□□□□ -2.13
RNU4-38P-201ENST00000364472 IFT140Q96RY7 1462 aa1.75□□□□□ -2.13
RNU4-38P-201ENST00000364472 KIF21BO75037 1637 aa1.74□□□□□ -2.13
RNU4-38P-201ENST00000364472 ERICH3Q5RHP9 1530 aa1.74□□□□□ -2.13
RNU4-38P-201ENST00000364472 RAD54L2Q9Y4B4 1467 aa1.74□□□□□ -2.13
RNU4-38P-201ENST00000364472 ZNF608Q9ULD9 1512 aaPredicted RBP1.73□□□□□ -2.13
RNU4-38P-201ENST00000364472 GAPVD1Q14C86 1478 aa1.73□□□□□ -2.13
RNU4-38P-201ENST00000364472 SOGA1O94964 1423 aa1.73□□□□□ -2.13
RNU4-38P-201ENST00000364472 SHROOM2Q13796 1616 aa1.73□□□□□ -2.13
RNU4-38P-201ENST00000364472 RUSC2Q8N2Y8 1516 aa1.72□□□□□ -2.13
RNU4-38P-201ENST00000364472 LRRIQ1Q96JM4 1722 aa1.72□□□□□ -2.13
RNU4-38P-201ENST00000364472 GRIN2BQ13224 1484 aa1.72□□□□□ -2.13
RNU4-38P-201ENST00000364472 MAGI1Q96QZ7 1491 aaPredicted RBP1.72□□□□□ -2.13
RNU4-38P-201ENST00000364472 CHIC1Q5VXU3 224 aa1.72□□□□□ -2.13
RNU4-38P-201ENST00000364472 EEA1Q15075 1411 aa1.72□□□□□ -2.13
RNU4-38P-201ENST00000364472 KIF27Q86VH2 1401 aa1.72□□□□□ -2.13
RNU4-38P-201ENST00000364472 CEP170Q5SW79 1584 aa1.72□□□□□ -2.13
RNU4-38P-201ENST00000364472 SYNJ2O15056 1496 aa1.71□□□□□ -2.14
RNU4-38P-201ENST00000364472 AQRO60306 1485 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU4-38P-201ENST00000364472 SNAPC4Q5SXM2 1469 aa1.71□□□□□ -2.14
RNU4-38P-201ENST00000364472 PRXQ9BXM0 1461 aa1.71□□□□□ -2.14
RNU4-38P-201ENST00000364472 TRIM41Q8WV44 630 aa1.71□□□□□ -2.14
RNU4-38P-201ENST00000364472 TDRD9Q8NDG6 1382 aaKnown RBP1.71□□□□□ -2.14
RNU4-38P-201ENST00000364472 CLASP1Q7Z460 1538 aa1.71□□□□□ -2.14
RNU4-38P-201ENST00000364472 GRIN2AQ12879 1464 aa1.7□□□□□ -2.14
RNU4-38P-201ENST00000364472 FHAD1B1AJZ9 1412 aa1.7□□□□□ -2.14
RNU4-38P-201ENST00000364472 NUP160Q12769 1436 aa1.7□□□□□ -2.14
RNU4-38P-201ENST00000364472 IQGAP2Q13576 1575 aa1.7□□□□□ -2.14
RNU4-38P-201ENST00000364472 SAMD9Q5K651 1589 aa1.7□□□□□ -2.14
RNU4-38P-201ENST00000364472 IGF1RP08069 1367 aa1.7□□□□□ -2.14
RNU4-38P-201ENST00000364472 KIAA0556O60303 1618 aa1.69□□□□□ -2.14
RNU4-38P-201ENST00000364472 GOLGA3Q08378 1498 aa1.69□□□□□ -2.14
RNU4-38P-201ENST00000364472 RAPGEF2Q9Y4G8 1499 aa1.69□□□□□ -2.14
RNU4-38P-201ENST00000364472 CFAP43Q8NDM7 1665 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms