RNA–Protein interactions for RNA: ENST00000361727.7

CNTNAP2-201, Transcript of contactin associated protein like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP2, Length 9,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-201ENST00000361727 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
CNTNAP2-201ENST00000361727 MYT1Q01538 1121 aa18.68■□□□□ 0.58
CNTNAP2-201ENST00000361727 CCER1Q8TC90 406 aaPredicted RBP18.11■□□□□ 0.49
CNTNAP2-201ENST00000361727 NISCHQ9Y2I1 1504 aa17.99■□□□□ 0.47
CNTNAP2-201ENST00000361727 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
CNTNAP2-201ENST00000361727 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
CNTNAP2-201ENST00000361727 CENPBP07199 599 aaPredicted RBP17.85■□□□□ 0.45
CNTNAP2-201ENST00000361727 APLP2Q06481 763 aa17.69■□□□□ 0.42
CNTNAP2-201ENST00000361727 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
CNTNAP2-201ENST00000361727 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
CNTNAP2-201ENST00000361727 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
CNTNAP2-201ENST00000361727 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
CNTNAP2-201ENST00000361727 NEFLP07196 543 aa17.38■□□□□ 0.37
CNTNAP2-201ENST00000361727 TTBK1Q5TCY1 1321 aaPredicted RBP17.17■□□□□ 0.34
CNTNAP2-201ENST00000361727 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
CNTNAP2-201ENST00000361727 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
CNTNAP2-201ENST00000361727 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
CNTNAP2-201ENST00000361727 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
CNTNAP2-201ENST00000361727 CLSPNQ9HAW4 1339 aa16.63■□□□□ 0.25
CNTNAP2-201ENST00000361727 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
CNTNAP2-201ENST00000361727 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
CNTNAP2-201ENST00000361727 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
CNTNAP2-201ENST00000361727 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
CNTNAP2-201ENST00000361727 HRCP23327 699 aa16.46■□□□□ 0.23
CNTNAP2-201ENST00000361727 UBTFP17480 764 aaKnown RBP16.4■□□□□ 0.22
CNTNAP2-201ENST00000361727 GLIPR1L2Q4G1C9 344 aa16.34■□□□□ 0.21
CNTNAP2-201ENST00000361727 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
CNTNAP2-201ENST00000361727 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
CNTNAP2-201ENST00000361727 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP2-201ENST00000361727 ANP32BQ92688 251 aaKnown RBP16.07■□□□□ 0.16
CNTNAP2-201ENST00000361727 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
CNTNAP2-201ENST00000361727 ANP32AP39687 249 aaKnown RBP16.01■□□□□ 0.15
CNTNAP2-201ENST00000361727 NEFMP07197 916 aa16■□□□□ 0.15
CNTNAP2-201ENST00000361727 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
CNTNAP2-201ENST00000361727 ANP32CO43423 234 aa15.88■□□□□ 0.13
CNTNAP2-201ENST00000361727 RANGAP1P46060 587 aaPredicted RBP15.83■□□□□ 0.12
CNTNAP2-201ENST00000361727 ANP32EQ9BTT0 268 aa15.81■□□□□ 0.12
CNTNAP2-201ENST00000361727 ACIN1Q9UKV3 1341 aaKnown RBP15.8■□□□□ 0.12
CNTNAP2-201ENST00000361727 UPF2Q9HAU5 1272 aaKnown RBP15.79■□□□□ 0.12
CNTNAP2-201ENST00000361727 EIF5BO60841 1220 aaKnown RBP15.75■□□□□ 0.11
CNTNAP2-201ENST00000361727 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
CNTNAP2-201ENST00000361727 GTF3C3Q9Y5Q9 886 aa15.68■□□□□ 0.1
CNTNAP2-201ENST00000361727 CANXP27824 592 aaKnown RBP15.67■□□□□ 0.1
CNTNAP2-201ENST00000361727 POLR3GLQ9BT43 218 aa15.67■□□□□ 0.1
CNTNAP2-201ENST00000361727 CHIC1Q5VXU3 224 aa15.66■□□□□ 0.1
CNTNAP2-201ENST00000361727 TNNT2P45379 298 aaPredicted RBP15.64■□□□□ 0.09
CNTNAP2-201ENST00000361727 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
CNTNAP2-201ENST00000361727 HSP90AA1P07900 732 aaKnown RBP15.59■□□□□ 0.09
CNTNAP2-201ENST00000361727 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
CNTNAP2-201ENST00000361727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
CNTNAP2-201ENST00000361727 ITGAEP38570 1179 aa15.52■□□□□ 0.07
CNTNAP2-201ENST00000361727 TRIM44Q96DX7 344 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP2-201ENST00000361727 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
CNTNAP2-201ENST00000361727 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.48■□□□□ 0.07
CNTNAP2-201ENST00000361727 NCLP19338 710 aaKnown RBP15.47■□□□□ 0.07
CNTNAP2-201ENST00000361727 DDRGK1Q96HY6 314 aa15.47■□□□□ 0.07
CNTNAP2-201ENST00000361727 BECN1Q14457 450 aa15.44■□□□□ 0.06
CNTNAP2-201ENST00000361727 FAM50AQ14320 339 aaKnown RBP15.41■□□□□ 0.06
CNTNAP2-201ENST00000361727 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
CNTNAP2-201ENST00000361727 GOLGA6L22H0YM25 854 aa15.39■□□□□ 0.05
CNTNAP2-201ENST00000361727 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
CNTNAP2-201ENST00000361727 TRIM52Q96A61 297 aa15.36■□□□□ 0.05
CNTNAP2-201ENST00000361727 CDK11BP21127 795 aaKnown RBP15.35■□□□□ 0.05
CNTNAP2-201ENST00000361727 PPARGC1BQ86YN6 1023 aaKnown RBP15.32■□□□□ 0.04
CNTNAP2-201ENST00000361727 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
CNTNAP2-201ENST00000361727 MYH16Q9H6N6 1097 aa15.3■□□□□ 0.04
CNTNAP2-201ENST00000361727 ARID4BQ4LE39 1312 aaPredicted RBP15.29■□□□□ 0.04
CNTNAP2-201ENST00000361727 BCANQ96GW7 911 aa15.28■□□□□ 0.04
CNTNAP2-201ENST00000361727 EEA1Q15075 1411 aa15.25■□□□□ 0.03
CNTNAP2-201ENST00000361727 CCDC136Q96JN2 1154 aa15.25■□□□□ 0.03
CNTNAP2-201ENST00000361727 PPM1GO15355 546 aaPredicted RBP15.24■□□□□ 0.03
CNTNAP2-201ENST00000361727 LOC105371045A0A1W2PR82 267 aa15.23■□□□□ 0.03
CNTNAP2-201ENST00000361727 NRDCO43847 1150 aa15.23■□□□□ 0.03
CNTNAP2-201ENST00000361727 GOLGA6L6A8MZA4 724 aa15.22■□□□□ 0.03
CNTNAP2-201ENST00000361727 CHMP4BQ9H444 224 aaKnown RBP15.21■□□□□ 0.03
CNTNAP2-201ENST00000361727 CFAP44Q96MT7 982 aa15.16■□□□□ 0.02
CNTNAP2-201ENST00000361727 PTMSP20962 102 aa15.16■□□□□ 0.02
CNTNAP2-201ENST00000361727 CASC1Q6TDU7 716 aa15.16■□□□□ 0.02
CNTNAP2-201ENST00000361727 ZRSR1Q15695 479 aaKnown RBP15.14■□□□□ 0.01
CNTNAP2-201ENST00000361727 L1TD1Q5T7N2 865 aaKnown RBP15.14■□□□□ 0.01
CNTNAP2-201ENST00000361727 CHAF1AQ13111 956 aaPredicted RBP15.14■□□□□ 0.01
CNTNAP2-201ENST00000361727 FKBP8Q14318 412 aa15.14■□□□□ 0.01
CNTNAP2-201ENST00000361727 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
CNTNAP2-201ENST00000361727 ZNF326Q5BKZ1 582 aaKnown RBP15.12■□□□□ 0.01
CNTNAP2-201ENST00000361727 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
CNTNAP2-201ENST00000361727 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
CNTNAP2-201ENST00000361727 USP35Q9P2H5 1018 aa15.07■□□□□ 0
CNTNAP2-201ENST00000361727 CNGB1Q14028 1251 aaPredicted RBP15.07■□□□□ 0
CNTNAP2-201ENST00000361727 TMC1Q8TDI8 760 aa15.05■□□□□ 0
CNTNAP2-201ENST00000361727 WDR43Q15061 677 aaKnown RBP eCLIP15.05■□□□□ -0
CNTNAP2-201ENST00000361727 MS4A1P11836 297 aa15.05■□□□□ -0
CNTNAP2-201ENST00000361727 CDCA8Q53HL2 280 aa15.04■□□□□ -0
CNTNAP2-201ENST00000361727 RSF1Q96T23 1441 aaPredicted RBP15.02■□□□□ -0
CNTNAP2-201ENST00000361727 PTMAP06454 111 aaKnown RBP15.01□□□□□ -0.01
CNTNAP2-201ENST00000361727 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
CNTNAP2-201ENST00000361727 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
CNTNAP2-201ENST00000361727 NBR1Q14596 966 aa14.96□□□□□ -0.01
CNTNAP2-201ENST00000361727 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
CNTNAP2-201ENST00000361727 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
CNTNAP2-201ENST00000361727 DNTTIP2Q5QJE6 756 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms