RNA–Protein interactions for RNA: ENST00000361670.3

LSM14B-203, Transcript of LSM family member 14B, humanhuman

TSL 5

Gene LSM14B, Length 1,239 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14B-203ENST00000361670 NISCHQ9Y2I1 1504 aa57.15■■■■■ 6.74
LSM14B-203ENST00000361670 CCDC180Q9P1Z9 1646 aa50.88■■■■■ 5.74
LSM14B-203ENST00000361670 ABCC9O60706 1549 aa50.13■■■■■ 5.62
LSM14B-203ENST00000361670 RB1CC1Q8TDY2 1594 aa48.08■■■■■ 5.29
LSM14B-203ENST00000361670 NACADO15069 1562 aa47.99■■■■■ 5.27
LSM14B-203ENST00000361670 DCAF8L2P0C7V8 631 aa47.78■■■■■ 5.24
LSM14B-203ENST00000361670 MYO15BQ96JP2 1530 aa47.68■■■■■ 5.22
LSM14B-203ENST00000361670 ZCCHC6Q5VYS8 1495 aaKnown RBP47.52■■■■■ 5.2
LSM14B-203ENST00000361670 DCAF1Q9Y4B6 1507 aa47.32■■■■■ 5.17
LSM14B-203ENST00000361670 UNC13AQ9UPW8 1703 aa46.89■■■■■ 5.1
LSM14B-203ENST00000361670 PABPN1Q86U42 306 aaKnown RBP eCLIP46.83■■■■■ 5.09
LSM14B-203ENST00000361670 BICRAQ9NZM4 1560 aa46.7■■■■■ 5.07
LSM14B-203ENST00000361670 DNAJC5BQ9UF47 199 aa46.49■■■■■ 5.03
LSM14B-203ENST00000361670 SCRIBQ14160 1630 aa46.33■■■■■ 5.01
LSM14B-203ENST00000361670 SHROOM4Q9ULL8 1493 aa46.2■■■■■ 4.99
LSM14B-203ENST00000361670 EIF4G1Q04637 1599 aaKnown RBP45.45■■■■■ 4.87
LSM14B-203ENST00000361670 CC2D2AQ9P2K1 1620 aa45.34■■■■■ 4.85
LSM14B-203ENST00000361670 CECR2Q9BXF3 1484 aa45.12■■■■■ 4.81
LSM14B-203ENST00000361670 NCAPD3P42695 1498 aa44.36■■■■■ 4.69
LSM14B-203ENST00000361670 SMARCA4P51532 1647 aa44.35■■■■■ 4.69
LSM14B-203ENST00000361670 ATAD2BQ9ULI0 1458 aa44.28■■■■■ 4.68
LSM14B-203ENST00000361670 BAZ1AQ9NRL2 1556 aaPredicted RBP44.27■■■■■ 4.68
LSM14B-203ENST00000361670 SMARCA2P51531 1590 aa44.16■■■■■ 4.66
LSM14B-203ENST00000361670 HMGXB3Q12766 1538 aa44.03■■■■■ 4.64
LSM14B-203ENST00000361670 MROH2BQ7Z745 1585 aa44.01■■■■■ 4.64
LSM14B-203ENST00000361670 PEG3Q9GZU2 1588 aa44.01■■■■■ 4.64
LSM14B-203ENST00000361670 BAZ1BQ9UIG0 1483 aaKnown RBP43.82■■■■■ 4.6
LSM14B-203ENST00000361670 WIZO95785 1651 aa43.45■■■■■ 4.55
LSM14B-203ENST00000361670 RSF1Q96T23 1441 aaPredicted RBP43.43■■■■■ 4.54
LSM14B-203ENST00000361670 NESP48681 1621 aa43.3■■■■■ 4.52
LSM14B-203ENST00000361670 ERCC6Q03468 1493 aa43.19■■■■■ 4.51
LSM14B-203ENST00000361670 LAMC3Q9Y6N6 1575 aa43.14■■■■■ 4.5
LSM14B-203ENST00000361670 CADPSQ9ULU8 1353 aa43.03■■■■■ 4.48
LSM14B-203ENST00000361670 TOP2AP11388 1531 aaKnown RBP43.01■■■■■ 4.48
LSM14B-203ENST00000361670 CUX2O14529 1486 aa42.97■■■■■ 4.47
LSM14B-203ENST00000361670 PDS5BQ9NTI5 1447 aa42.9■■■■■ 4.46
LSM14B-203ENST00000361670 THOC2Q8NI27 1593 aaKnown RBP42.69■■■■■ 4.43
LSM14B-203ENST00000361670 CFTRP13569 1480 aa42.69■■■■■ 4.42
LSM14B-203ENST00000361670 KIF21AQ7Z4S6 1674 aa42.67■■■■■ 4.42
LSM14B-203ENST00000361670 CCDC88BA6NC98 1476 aa42.55■■■■■ 4.4
LSM14B-203ENST00000361670 FANCD2Q9BXW9 1451 aa42.46■■■■■ 4.39
LSM14B-203ENST00000361670 MRC2Q9UBG0 1479 aa42.45■■■■■ 4.39
LSM14B-203ENST00000361670 CEP164Q9UPV0 1460 aa42.42■■■■■ 4.38
LSM14B-203ENST00000361670 WDR62O43379 1518 aa42.34■■■■■ 4.37
LSM14B-203ENST00000361670 DNAJC5Q9H3Z4 198 aa42.15■■■■■ 4.34
LSM14B-203ENST00000361670 PRDM2Q13029 1718 aa42.13■■■■■ 4.33
LSM14B-203ENST00000361670 URB2Q14146 1524 aaKnown RBP42.08■■■■■ 4.33
LSM14B-203ENST00000361670 SUPT5HO00267 1087 aaKnown RBP41.95■■■■■ 4.31
LSM14B-203ENST00000361670 ABCC8Q09428 1581 aa41.76■■■■■ 4.27
LSM14B-203ENST00000361670 TOPBP1Q92547 1522 aa41.75■■■■■ 4.27
LSM14B-203ENST00000361670 DNMBPQ6XZF7 1577 aa41.64■■■■■ 4.26
LSM14B-203ENST00000361670 IFT140Q96RY7 1462 aa41.59■■■■■ 4.25
LSM14B-203ENST00000361670 ZNF608Q9ULD9 1512 aaPredicted RBP41.42■■■■■ 4.22
LSM14B-203ENST00000361670 POLA1P09884 1462 aaPredicted RBP41.38■■■■■ 4.21
LSM14B-203ENST00000361670 TARBP1Q13395 1621 aaKnown RBP41.32■■■■■ 4.2
LSM14B-203ENST00000361670 CUX1P39880 1505 aa41.31■■■■■ 4.2
LSM14B-203ENST00000361670 SOGA1O94964 1423 aa41.22■■■■■ 4.19
LSM14B-203ENST00000361670 FGD5Q6ZNL6 1462 aa41.2■■■■■ 4.19
LSM14B-203ENST00000361670 RAD54L2Q9Y4B4 1467 aa41.19■■■■■ 4.18
LSM14B-203ENST00000361670 EIF4G3O43432 1585 aaKnown RBP41.16■■■■■ 4.18
LSM14B-203ENST00000361670 AQRO60306 1485 aaKnown RBP eCLIP41.15■■■■■ 4.182e-7■■■□□ 18.3
LSM14B-203ENST00000361670 OSCARQ8IYS5 282 aa41.15■■■■■ 4.18
LSM14B-203ENST00000361670 TDRD9Q8NDG6 1382 aaKnown RBP41.02■■■■■ 4.16
LSM14B-203ENST00000361670 WDR97A6NE52 1622 aa40.97■■■■■ 4.15
LSM14B-203ENST00000361670 WRNQ14191 1432 aaPredicted RBP eCLIP40.91■■■■■ 4.14
LSM14B-203ENST00000361670 TOP2BQ02880 1626 aa40.84■■■■■ 4.13
LSM14B-203ENST00000361670 ABCA10Q8WWZ4 1543 aa40.83■■■■■ 4.13
LSM14B-203ENST00000361670 BIVM-ERCC5R4GMW8 1640 aa40.81■■■■■ 4.12
LSM14B-203ENST00000361670 SYNJ1O43426 1573 aa40.78■■■■■ 4.12
LSM14B-203ENST00000361670 GRIN2BQ13224 1484 aa40.77■■■■■ 4.12
LSM14B-203ENST00000361670 GAPVD1Q14C86 1478 aa40.71■■■■■ 4.11
LSM14B-203ENST00000361670 SNAPC4Q5SXM2 1469 aa40.71■■■■■ 4.11
LSM14B-203ENST00000361670 MAGI1Q96QZ7 1491 aaPredicted RBP40.7■■■■■ 4.11
LSM14B-203ENST00000361670 CHD1O14646 1710 aa40.65■■■■■ 4.1
LSM14B-203ENST00000361670 FBLN2P98095 1184 aa40.65■■■■■ 4.1
LSM14B-203ENST00000361670 ABCA5Q8WWZ7 1642 aa40.64■■■■■ 4.1
LSM14B-203ENST00000361670 CHMP7Q8WUX9 453 aaPredicted RBP40.55■■■■■ 4.08
LSM14B-203ENST00000361670 SYNJ2O15056 1496 aa40.54■■■■■ 4.08
LSM14B-203ENST00000361670 PBRM1Q86U86 1689 aa40.51■■■■■ 4.08
LSM14B-203ENST00000361670 TRIM41Q8WV44 630 aa40.43■■■■■ 4.06
LSM14B-203ENST00000361670 ARHGEF11O15085 1522 aa40.42■■■■■ 4.06
LSM14B-203ENST00000361670 RIMBP3CA6NJZ7 1639 aa40.42■■■■■ 4.06
LSM14B-203ENST00000361670 RIMBP3BA6NNM3 1639 aa40.42■■■■■ 4.06
LSM14B-203ENST00000361670 RIMBP3Q9UFD9 1639 aa40.42■■■■■ 4.06
LSM14B-203ENST00000361670 CLASP1Q7Z460 1538 aa40.35■■■■■ 4.05
LSM14B-203ENST00000361670 ERICH3Q5RHP9 1530 aa40.32■■■■■ 4.04
LSM14B-203ENST00000361670 ADAMTS12P58397 1594 aa40.26■■■■■ 4.04
LSM14B-203ENST00000361670 FHAD1B1AJZ9 1412 aa40.25■■■■■ 4.03
LSM14B-203ENST00000361670 GRIN2AQ12879 1464 aa40.23■■■■■ 4.03
LSM14B-203ENST00000361670 NUP160Q12769 1436 aa40.13■■■■■ 4.01
LSM14B-203ENST00000361670 ARAP1Q96P48 1450 aa40.1■■■■■ 4.01
LSM14B-203ENST00000361670 CYB5RLQ6IPT4 315 aa40.09■■■■■ 4.01
LSM14B-203ENST00000361670 KIF27Q86VH2 1401 aa40.08■■■■■ 4.01
LSM14B-203ENST00000361670 IGF1RP08069 1367 aa40.06■■■■■ 4
LSM14B-203ENST00000361670 CEP170Q5SW79 1584 aa40.01■■■■■ 4
LSM14B-203ENST00000361670 SHROOM2Q13796 1616 aa39.8■■■■□ 3.96
LSM14B-203ENST00000361670 CUL7Q14999 1698 aa39.8■■■■□ 3.96
LSM14B-203ENST00000361670 CARMIL1Q5VZK9 1371 aa39.75■■■■□ 3.95
LSM14B-203ENST00000361670 ERCC6L2Q5T890 1561 aa39.73■■■■□ 3.95
LSM14B-203ENST00000361670 JPH4Q96JJ6 628 aa39.72■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms