RNA–Protein interactions for RNA: ENST00000361283.2

CHAMP1-201, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAMP1, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-201ENST00000361283 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.72
CHAMP1-201ENST00000361283 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
CHAMP1-201ENST00000361283 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
CHAMP1-201ENST00000361283 DCAF1Q9Y4B6 1507 aa21.46■■□□□ 1.03
CHAMP1-201ENST00000361283 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
CHAMP1-201ENST00000361283 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
CHAMP1-201ENST00000361283 ABCC9O60706 1549 aa20.99■□□□□ 0.95
CHAMP1-201ENST00000361283 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
CHAMP1-201ENST00000361283 NACADO15069 1562 aa20.93■□□□□ 0.94
CHAMP1-201ENST00000361283 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
CHAMP1-201ENST00000361283 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
CHAMP1-201ENST00000361283 UNC13AQ9UPW8 1703 aa20.29■□□□□ 0.84
CHAMP1-201ENST00000361283 SUPT5HO00267 1087 aaKnown RBP20.21■□□□□ 0.83
CHAMP1-201ENST00000361283 BICRAQ9NZM4 1560 aa20.06■□□□□ 0.8
CHAMP1-201ENST00000361283 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
CHAMP1-201ENST00000361283 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
CHAMP1-201ENST00000361283 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
CHAMP1-201ENST00000361283 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
CHAMP1-201ENST00000361283 SMARCA4P51532 1647 aa19.83■□□□□ 0.77
CHAMP1-201ENST00000361283 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
CHAMP1-201ENST00000361283 WIZO95785 1651 aa19.76■□□□□ 0.75
CHAMP1-201ENST00000361283 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
CHAMP1-201ENST00000361283 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
CHAMP1-201ENST00000361283 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
CHAMP1-201ENST00000361283 SMARCA2P51531 1590 aa19.48■□□□□ 0.71
CHAMP1-201ENST00000361283 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
CHAMP1-201ENST00000361283 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
CHAMP1-201ENST00000361283 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
CHAMP1-201ENST00000361283 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.68
CHAMP1-201ENST00000361283 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
CHAMP1-201ENST00000361283 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
CHAMP1-201ENST00000361283 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
CHAMP1-201ENST00000361283 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
CHAMP1-201ENST00000361283 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
CHAMP1-201ENST00000361283 CFTRP13569 1480 aa18.89■□□□□ 0.61
CHAMP1-201ENST00000361283 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
CHAMP1-201ENST00000361283 WRNQ14191 1432 aaPredicted RBP eCLIP18.86■□□□□ 0.61
CHAMP1-201ENST00000361283 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
CHAMP1-201ENST00000361283 CADPSQ9ULU8 1353 aa18.76■□□□□ 0.59
CHAMP1-201ENST00000361283 BIVM-ERCC5R4GMW8 1640 aa18.76■□□□□ 0.59
CHAMP1-201ENST00000361283 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
CHAMP1-201ENST00000361283 EEA1Q15075 1411 aa18.74■□□□□ 0.59
CHAMP1-201ENST00000361283 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
CHAMP1-201ENST00000361283 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
CHAMP1-201ENST00000361283 CUX1P39880 1505 aa18.63■□□□□ 0.57
CHAMP1-201ENST00000361283 SOGA1O94964 1423 aa18.62■□□□□ 0.57
CHAMP1-201ENST00000361283 FAM9AQ8IZU1 332 aaPredicted RBP18.6■□□□□ 0.57
CHAMP1-201ENST00000361283 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
CHAMP1-201ENST00000361283 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
CHAMP1-201ENST00000361283 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
CHAMP1-201ENST00000361283 KIF21BO75037 1637 aa18.49■□□□□ 0.55
CHAMP1-201ENST00000361283 NESP48681 1621 aa18.49■□□□□ 0.55
CHAMP1-201ENST00000361283 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
CHAMP1-201ENST00000361283 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
CHAMP1-201ENST00000361283 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
CHAMP1-201ENST00000361283 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
CHAMP1-201ENST00000361283 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
CHAMP1-201ENST00000361283 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
CHAMP1-201ENST00000361283 FGD5Q6ZNL6 1462 aa18.38■□□□□ 0.53
CHAMP1-201ENST00000361283 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
CHAMP1-201ENST00000361283 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
CHAMP1-201ENST00000361283 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
CHAMP1-201ENST00000361283 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
CHAMP1-201ENST00000361283 PRXQ9BXM0 1461 aa18.33■□□□□ 0.52
CHAMP1-201ENST00000361283 URB2Q14146 1524 aaKnown RBP18.32■□□□□ 0.52
CHAMP1-201ENST00000361283 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
CHAMP1-201ENST00000361283 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
CHAMP1-201ENST00000361283 CEP162Q5TB80 1403 aa18.27■□□□□ 0.52
CHAMP1-201ENST00000361283 CUX2O14529 1486 aa18.26■□□□□ 0.51
CHAMP1-201ENST00000361283 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
CHAMP1-201ENST00000361283 WDR97A6NE52 1622 aa18.25■□□□□ 0.51
CHAMP1-201ENST00000361283 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
CHAMP1-201ENST00000361283 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
CHAMP1-201ENST00000361283 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
CHAMP1-201ENST00000361283 IGF1RP08069 1367 aa18.19■□□□□ 0.5
CHAMP1-201ENST00000361283 RAD54L2Q9Y4B4 1467 aa18.17■□□□□ 0.5
CHAMP1-201ENST00000361283 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
CHAMP1-201ENST00000361283 WDR62O43379 1518 aa18.13■□□□□ 0.49
CHAMP1-201ENST00000361283 CUL7Q14999 1698 aa18.13■□□□□ 0.49
CHAMP1-201ENST00000361283 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
CHAMP1-201ENST00000361283 CLIP1P30622 1438 aa18.1■□□□□ 0.49
CHAMP1-201ENST00000361283 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.49
CHAMP1-201ENST00000361283 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
CHAMP1-201ENST00000361283 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
CHAMP1-201ENST00000361283 GAPVD1Q14C86 1478 aa18.03■□□□□ 0.48
CHAMP1-201ENST00000361283 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
CHAMP1-201ENST00000361283 ERCC6Q03468 1493 aa18■□□□□ 0.47
CHAMP1-201ENST00000361283 VPS8Q8N3P4 1428 aa18■□□□□ 0.47
CHAMP1-201ENST00000361283 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
CHAMP1-201ENST00000361283 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
CHAMP1-201ENST00000361283 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
CHAMP1-201ENST00000361283 ARAP1Q96P48 1450 aa17.94■□□□□ 0.46
CHAMP1-201ENST00000361283 CTTNBP2Q8WZ74 1663 aa17.93■□□□□ 0.46
CHAMP1-201ENST00000361283 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
CHAMP1-201ENST00000361283 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
CHAMP1-201ENST00000361283 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
CHAMP1-201ENST00000361283 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
CHAMP1-201ENST00000361283 EFCAB5A4FU69 1503 aa17.86■□□□□ 0.45
CHAMP1-201ENST00000361283 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHAMP1-201ENST00000361283 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms