RNA–Protein interactions for RNA: ENST00000360596.6

ACSS2-202, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSS2, Length 3,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-202ENST00000360596 NISCHQ9Y2I1 1504 aa32.62■■■□□ 2.81
ACSS2-202ENST00000360596 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
ACSS2-202ENST00000360596 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
ACSS2-202ENST00000360596 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
ACSS2-202ENST00000360596 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
ACSS2-202ENST00000360596 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
ACSS2-202ENST00000360596 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
ACSS2-202ENST00000360596 ABCC9O60706 1549 aa26.53■■□□□ 1.84
ACSS2-202ENST00000360596 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
ACSS2-202ENST00000360596 HRCP23327 699 aa26.07■■□□□ 1.76
ACSS2-202ENST00000360596 MYO15BQ96JP2 1530 aa25.95■■□□□ 1.74
ACSS2-202ENST00000360596 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
ACSS2-202ENST00000360596 NACADO15069 1562 aa25.86■■□□□ 1.73
ACSS2-202ENST00000360596 PPARGC1BQ86YN6 1023 aaKnown RBP25.82■■□□□ 1.72
ACSS2-202ENST00000360596 RSF1Q96T23 1441 aaPredicted RBP25.7■■□□□ 1.71
ACSS2-202ENST00000360596 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
ACSS2-202ENST00000360596 PELP1Q8IZL8 1130 aaKnown RBP25.63■■□□□ 1.69
ACSS2-202ENST00000360596 PCGF6Q9BYE7 350 aa25.62■■□□□ 1.69
ACSS2-202ENST00000360596 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
ACSS2-202ENST00000360596 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
ACSS2-202ENST00000360596 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.656e-7■■□□□ 12.5
ACSS2-202ENST00000360596 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
ACSS2-202ENST00000360596 WIZO95785 1651 aa25.26■■□□□ 1.63
ACSS2-202ENST00000360596 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.63
ACSS2-202ENST00000360596 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
ACSS2-202ENST00000360596 FAM9AQ8IZU1 332 aaPredicted RBP25.1■■□□□ 1.61
ACSS2-202ENST00000360596 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
ACSS2-202ENST00000360596 EHMT2Q96KQ7 1210 aa25.05■■□□□ 1.6
ACSS2-202ENST00000360596 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
ACSS2-202ENST00000360596 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
ACSS2-202ENST00000360596 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
ACSS2-202ENST00000360596 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
ACSS2-202ENST00000360596 CCDC88BA6NC98 1476 aa24.74■■□□□ 1.55
ACSS2-202ENST00000360596 MYT1Q01538 1121 aa24.68■■□□□ 1.54
ACSS2-202ENST00000360596 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
ACSS2-202ENST00000360596 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
ACSS2-202ENST00000360596 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
ACSS2-202ENST00000360596 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
ACSS2-202ENST00000360596 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
ACSS2-202ENST00000360596 BAZ1BQ9UIG0 1483 aaKnown RBP24.39■■□□□ 1.49
ACSS2-202ENST00000360596 PEG3Q9GZU2 1588 aa24.35■■□□□ 1.49
ACSS2-202ENST00000360596 SOGA1O94964 1423 aa24.29■■□□□ 1.48
ACSS2-202ENST00000360596 ZEB1P37275 1124 aaPredicted RBP24.27■■□□□ 1.48
ACSS2-202ENST00000360596 RUSC2Q8N2Y8 1516 aa24.22■■□□□ 1.47
ACSS2-202ENST00000360596 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
ACSS2-202ENST00000360596 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
ACSS2-202ENST00000360596 GTF3C3Q9Y5Q9 886 aa24.18■■□□□ 1.46
ACSS2-202ENST00000360596 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
ACSS2-202ENST00000360596 TTBK1Q5TCY1 1321 aaPredicted RBP24.07■■□□□ 1.44
ACSS2-202ENST00000360596 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
ACSS2-202ENST00000360596 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
ACSS2-202ENST00000360596 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
ACSS2-202ENST00000360596 NCAPD3P42695 1498 aa24■■□□□ 1.43
ACSS2-202ENST00000360596 RANGAP1P46060 587 aaPredicted RBP23.92■■□□□ 1.42
ACSS2-202ENST00000360596 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.42
ACSS2-202ENST00000360596 HMGXB3Q12766 1538 aa23.89■■□□□ 1.41
ACSS2-202ENST00000360596 CEP162Q5TB80 1403 aa23.88■■□□□ 1.41
ACSS2-202ENST00000360596 EEA1Q15075 1411 aa23.82■■□□□ 1.4
ACSS2-202ENST00000360596 TNIKQ9UKE5 1360 aa23.8■■□□□ 1.4
ACSS2-202ENST00000360596 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
ACSS2-202ENST00000360596 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
ACSS2-202ENST00000360596 CFTRP13569 1480 aa23.7■■□□□ 1.38
ACSS2-202ENST00000360596 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
ACSS2-202ENST00000360596 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
ACSS2-202ENST00000360596 CUX1P39880 1505 aa23.67■■□□□ 1.38
ACSS2-202ENST00000360596 DIEXFQ68CQ4 756 aaKnown RBP23.66■■□□□ 1.38
ACSS2-202ENST00000360596 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
ACSS2-202ENST00000360596 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
ACSS2-202ENST00000360596 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
ACSS2-202ENST00000360596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.6■■□□□ 1.37
ACSS2-202ENST00000360596 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
ACSS2-202ENST00000360596 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
ACSS2-202ENST00000360596 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
ACSS2-202ENST00000360596 CLIP1P30622 1438 aa23.54■■□□□ 1.36
ACSS2-202ENST00000360596 KIF21BO75037 1637 aa23.53■■□□□ 1.36
ACSS2-202ENST00000360596 NESP48681 1621 aa23.49■■□□□ 1.35
ACSS2-202ENST00000360596 KIF27Q86VH2 1401 aa23.44■■□□□ 1.34
ACSS2-202ENST00000360596 CUX2O14529 1486 aa23.39■■□□□ 1.33
ACSS2-202ENST00000360596 PRXQ9BXM0 1461 aa23.39■■□□□ 1.33
ACSS2-202ENST00000360596 FANCD2Q9BXW9 1451 aa23.38■■□□□ 1.33
ACSS2-202ENST00000360596 FGD5Q6ZNL6 1462 aa23.35■■□□□ 1.33
ACSS2-202ENST00000360596 BCL11AQ9H165 835 aa23.34■■□□□ 1.33
ACSS2-202ENST00000360596 APLP2Q06481 763 aa23.33■■□□□ 1.32
ACSS2-202ENST00000360596 VPS8Q8N3P4 1428 aa23.31■■□□□ 1.32
ACSS2-202ENST00000360596 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
ACSS2-202ENST00000360596 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
ACSS2-202ENST00000360596 IGF1RP08069 1367 aa23.27■■□□□ 1.32
ACSS2-202ENST00000360596 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
ACSS2-202ENST00000360596 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
ACSS2-202ENST00000360596 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
ACSS2-202ENST00000360596 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
ACSS2-202ENST00000360596 KANK4Q5T7N3 995 aaPredicted RBP23.16■■□□□ 1.3
ACSS2-202ENST00000360596 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
ACSS2-202ENST00000360596 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
ACSS2-202ENST00000360596 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
ACSS2-202ENST00000360596 DNMBPQ6XZF7 1577 aa23.08■■□□□ 1.29
ACSS2-202ENST00000360596 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.28
ACSS2-202ENST00000360596 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
ACSS2-202ENST00000360596 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
ACSS2-202ENST00000360596 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms