RNA–Protein interactions for RNA: ENST00000360066.6

CDK18-201, Transcript of cyclin dependent kinase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK18, Length 3,141 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-201ENST00000360066 NISCHQ9Y2I1 1504 aa33.21■■■□□ 2.91
CDK18-201ENST00000360066 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
CDK18-201ENST00000360066 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
CDK18-201ENST00000360066 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
CDK18-201ENST00000360066 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
CDK18-201ENST00000360066 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
CDK18-201ENST00000360066 SUPT5HO00267 1087 aaKnown RBP27.24■■□□□ 1.95
CDK18-201ENST00000360066 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
CDK18-201ENST00000360066 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
CDK18-201ENST00000360066 ABCC9O60706 1549 aa26.45■■□□□ 1.82
CDK18-201ENST00000360066 SCRIBQ14160 1630 aa26.41■■□□□ 1.82
CDK18-201ENST00000360066 NACADO15069 1562 aa26.31■■□□□ 1.8
CDK18-201ENST00000360066 HRCP23327 699 aa26.22■■□□□ 1.79
CDK18-201ENST00000360066 RSF1Q96T23 1441 aaPredicted RBP26.16■■□□□ 1.78
CDK18-201ENST00000360066 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
CDK18-201ENST00000360066 RB1CC1Q8TDY2 1594 aa25.89■■□□□ 1.74
CDK18-201ENST00000360066 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
CDK18-201ENST00000360066 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.72
CDK18-201ENST00000360066 CECR2Q9BXF3 1484 aa25.81■■□□□ 1.72
CDK18-201ENST00000360066 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
CDK18-201ENST00000360066 WIZO95785 1651 aa25.59■■□□□ 1.69
CDK18-201ENST00000360066 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
CDK18-201ENST00000360066 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
CDK18-201ENST00000360066 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
CDK18-201ENST00000360066 TRIM26Q12899 539 aaPredicted RBP25.43■■□□□ 1.66
CDK18-201ENST00000360066 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
CDK18-201ENST00000360066 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
CDK18-201ENST00000360066 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
CDK18-201ENST00000360066 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
CDK18-201ENST00000360066 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
CDK18-201ENST00000360066 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
CDK18-201ENST00000360066 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
CDK18-201ENST00000360066 EHMT2Q96KQ7 1210 aa25.03■■□□□ 1.6
CDK18-201ENST00000360066 PELP1Q8IZL8 1130 aaKnown RBP25■■□□□ 1.59
CDK18-201ENST00000360066 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.591e-6■■□□□ 13.6
CDK18-201ENST00000360066 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
CDK18-201ENST00000360066 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
CDK18-201ENST00000360066 ABCC8Q09428 1581 aa24.89■■□□□ 1.57
CDK18-201ENST00000360066 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
CDK18-201ENST00000360066 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
CDK18-201ENST00000360066 EEA1Q15075 1411 aa24.63■■□□□ 1.53
CDK18-201ENST00000360066 SOGA1O94964 1423 aa24.61■■□□□ 1.53
CDK18-201ENST00000360066 BAZ1BQ9UIG0 1483 aaKnown RBP24.61■■□□□ 1.53
CDK18-201ENST00000360066 WRNQ14191 1432 aaPredicted RBP eCLIP24.56■■□□□ 1.52
CDK18-201ENST00000360066 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
CDK18-201ENST00000360066 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
CDK18-201ENST00000360066 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
CDK18-201ENST00000360066 SYNJ1O43426 1573 aa24.45■■□□□ 1.51
CDK18-201ENST00000360066 CEP162Q5TB80 1403 aa24.45■■□□□ 1.5
CDK18-201ENST00000360066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
CDK18-201ENST00000360066 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.5
CDK18-201ENST00000360066 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
CDK18-201ENST00000360066 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
CDK18-201ENST00000360066 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
CDK18-201ENST00000360066 KIF21BO75037 1637 aa24.29■■□□□ 1.48
CDK18-201ENST00000360066 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
CDK18-201ENST00000360066 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
CDK18-201ENST00000360066 CEP164Q9UPV0 1460 aa24.27■■□□□ 1.48
CDK18-201ENST00000360066 TOP2BQ02880 1626 aa24.24■■□□□ 1.47
CDK18-201ENST00000360066 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
CDK18-201ENST00000360066 GTF3C3Q9Y5Q9 886 aa24.07■■□□□ 1.44
CDK18-201ENST00000360066 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
CDK18-201ENST00000360066 DIEXFQ68CQ4 756 aaKnown RBP24.06■■□□□ 1.44
CDK18-201ENST00000360066 RAPGEF2Q9Y4G8 1499 aa24.05■■□□□ 1.44
CDK18-201ENST00000360066 CFTRP13569 1480 aa24.05■■□□□ 1.44
CDK18-201ENST00000360066 ACIN1Q9UKV3 1341 aaKnown RBP24.04■■□□□ 1.44
CDK18-201ENST00000360066 CLIP1P30622 1438 aa24.04■■□□□ 1.44
CDK18-201ENST00000360066 CUX1P39880 1505 aa24■■□□□ 1.43
CDK18-201ENST00000360066 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
CDK18-201ENST00000360066 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
CDK18-201ENST00000360066 MYT1Q01538 1121 aa23.95■■□□□ 1.42
CDK18-201ENST00000360066 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
CDK18-201ENST00000360066 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
CDK18-201ENST00000360066 CENPBP07199 599 aaPredicted RBP23.86■■□□□ 1.41
CDK18-201ENST00000360066 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
CDK18-201ENST00000360066 YTHDC1Q96MU7 727 aaKnown RBP23.83■■□□□ 1.41
CDK18-201ENST00000360066 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
CDK18-201ENST00000360066 ZNF316A6NFI3 1004 aaPredicted RBP23.76■■□□□ 1.39
CDK18-201ENST00000360066 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
CDK18-201ENST00000360066 APLP2Q06481 763 aa23.73■■□□□ 1.39
CDK18-201ENST00000360066 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
CDK18-201ENST00000360066 ARAP1Q96P48 1450 aa23.7■■□□□ 1.39
CDK18-201ENST00000360066 RANGAP1P46060 587 aaPredicted RBP23.68■■□□□ 1.38
CDK18-201ENST00000360066 CUX2O14529 1486 aa23.6■■□□□ 1.37
CDK18-201ENST00000360066 IGF1RP08069 1367 aa23.59■■□□□ 1.37
CDK18-201ENST00000360066 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
CDK18-201ENST00000360066 ARHGAP35Q9NRY4 1499 aa23.54■■□□□ 1.36
CDK18-201ENST00000360066 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
CDK18-201ENST00000360066 MIER1Q8N108 512 aa23.51■■□□□ 1.35
CDK18-201ENST00000360066 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
CDK18-201ENST00000360066 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
CDK18-201ENST00000360066 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
CDK18-201ENST00000360066 RRBP1Q9P2E9 1410 aaKnown RBP23.4■■□□□ 1.34
CDK18-201ENST00000360066 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
CDK18-201ENST00000360066 ABCA10Q8WWZ4 1543 aa23.37■■□□□ 1.33
CDK18-201ENST00000360066 NESP48681 1621 aa23.35■■□□□ 1.33
CDK18-201ENST00000360066 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
CDK18-201ENST00000360066 MAP3K1Q13233 1512 aa23.34■■□□□ 1.33
CDK18-201ENST00000360066 LAMC3Q9Y6N6 1575 aa23.32■■□□□ 1.32
CDK18-201ENST00000360066 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms