RNA–Protein interactions for RNA: ENST00000359866.8

DDA1-201, Transcript of DET1 and DDB1 associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDA1, Length 4,078 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDA1-201ENST00000359866 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
DDA1-201ENST00000359866 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
DDA1-201ENST00000359866 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
DDA1-201ENST00000359866 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
DDA1-201ENST00000359866 HRCP23327 699 aa19■□□□□ 0.63
DDA1-201ENST00000359866 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
DDA1-201ENST00000359866 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
DDA1-201ENST00000359866 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
DDA1-201ENST00000359866 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
DDA1-201ENST00000359866 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
DDA1-201ENST00000359866 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
DDA1-201ENST00000359866 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
DDA1-201ENST00000359866 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
DDA1-201ENST00000359866 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
DDA1-201ENST00000359866 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
DDA1-201ENST00000359866 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
DDA1-201ENST00000359866 ABCC9O60706 1549 aa18.09■□□□□ 0.49
DDA1-201ENST00000359866 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
DDA1-201ENST00000359866 LOC105371045A0A1W2PR82 267 aa17.94■□□□□ 0.46
DDA1-201ENST00000359866 TTBK1Q5TCY1 1321 aaPredicted RBP17.83■□□□□ 0.45
DDA1-201ENST00000359866 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
DDA1-201ENST00000359866 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
DDA1-201ENST00000359866 CENPBP07199 599 aaPredicted RBP17.75■□□□□ 0.43
DDA1-201ENST00000359866 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
DDA1-201ENST00000359866 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
DDA1-201ENST00000359866 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
DDA1-201ENST00000359866 MYT1Q01538 1121 aa17.67■□□□□ 0.42
DDA1-201ENST00000359866 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
DDA1-201ENST00000359866 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
DDA1-201ENST00000359866 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
DDA1-201ENST00000359866 GTF3C3Q9Y5Q9 886 aa17.46■□□□□ 0.39
DDA1-201ENST00000359866 ACIN1Q9UKV3 1341 aaKnown RBP17.46■□□□□ 0.39
DDA1-201ENST00000359866 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
DDA1-201ENST00000359866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
DDA1-201ENST00000359866 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
DDA1-201ENST00000359866 NACADO15069 1562 aa17.32■□□□□ 0.36
DDA1-201ENST00000359866 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
DDA1-201ENST00000359866 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
DDA1-201ENST00000359866 NEUROD1Q13562 356 aa17.27■□□□□ 0.36
DDA1-201ENST00000359866 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
DDA1-201ENST00000359866 WIZO95785 1651 aa17.24■□□□□ 0.35
DDA1-201ENST00000359866 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
DDA1-201ENST00000359866 EEA1Q15075 1411 aa17.1■□□□□ 0.33
DDA1-201ENST00000359866 TOP2AP11388 1531 aaKnown RBP17.09■□□□□ 0.33
DDA1-201ENST00000359866 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
DDA1-201ENST00000359866 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.32
DDA1-201ENST00000359866 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
DDA1-201ENST00000359866 APLP2Q06481 763 aa17.01■□□□□ 0.31
DDA1-201ENST00000359866 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
DDA1-201ENST00000359866 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
DDA1-201ENST00000359866 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
DDA1-201ENST00000359866 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
DDA1-201ENST00000359866 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
DDA1-201ENST00000359866 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
DDA1-201ENST00000359866 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
DDA1-201ENST00000359866 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
DDA1-201ENST00000359866 KIF21BO75037 1637 aa16.89■□□□□ 0.29
DDA1-201ENST00000359866 CLSPNQ9HAW4 1339 aa16.89■□□□□ 0.29
DDA1-201ENST00000359866 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
DDA1-201ENST00000359866 BCANQ96GW7 911 aa16.85■□□□□ 0.29
DDA1-201ENST00000359866 SOGA1O94964 1423 aa16.82■□□□□ 0.28
DDA1-201ENST00000359866 NEFLP07196 543 aa16.8■□□□□ 0.28
DDA1-201ENST00000359866 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.27
DDA1-201ENST00000359866 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
DDA1-201ENST00000359866 CEP164Q9UPV0 1460 aa16.75■□□□□ 0.27
DDA1-201ENST00000359866 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
DDA1-201ENST00000359866 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
DDA1-201ENST00000359866 MIER1Q8N108 512 aa16.71■□□□□ 0.27
DDA1-201ENST00000359866 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
DDA1-201ENST00000359866 VPS8Q8N3P4 1428 aa16.69■□□□□ 0.26
DDA1-201ENST00000359866 CLIP1P30622 1438 aa16.61■□□□□ 0.25
DDA1-201ENST00000359866 ITGAEP38570 1179 aa16.6■□□□□ 0.25
DDA1-201ENST00000359866 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
DDA1-201ENST00000359866 CUX2O14529 1486 aa16.57■□□□□ 0.24
DDA1-201ENST00000359866 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
DDA1-201ENST00000359866 DHX57Q6P158 1386 aaKnown RBP16.5■□□□□ 0.23
DDA1-201ENST00000359866 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
DDA1-201ENST00000359866 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
DDA1-201ENST00000359866 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
DDA1-201ENST00000359866 RRBP1Q9P2E9 1410 aaKnown RBP16.46■□□□□ 0.22
DDA1-201ENST00000359866 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
DDA1-201ENST00000359866 ATP1B4Q9UN42 357 aaPredicted RBP16.42■□□□□ 0.22
DDA1-201ENST00000359866 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
DDA1-201ENST00000359866 BCL11AQ9H165 835 aa16.39■□□□□ 0.21
DDA1-201ENST00000359866 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
DDA1-201ENST00000359866 FKBP8Q14318 412 aa16.38■□□□□ 0.21
DDA1-201ENST00000359866 PRXQ9BXM0 1461 aa16.38■□□□□ 0.21
DDA1-201ENST00000359866 ANP32EQ9BTT0 268 aa16.36■□□□□ 0.21
DDA1-201ENST00000359866 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
DDA1-201ENST00000359866 TSHZ2Q9NRE2 1034 aa16.35■□□□□ 0.21
DDA1-201ENST00000359866 MAP3K1Q13233 1512 aa16.31■□□□□ 0.2
DDA1-201ENST00000359866 ATAD2BQ9ULI0 1458 aa16.28■□□□□ 0.2
DDA1-201ENST00000359866 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
DDA1-201ENST00000359866 MAPKBP1O60336 1514 aa16.24■□□□□ 0.19
DDA1-201ENST00000359866 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
DDA1-201ENST00000359866 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
DDA1-201ENST00000359866 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
DDA1-201ENST00000359866 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
DDA1-201ENST00000359866 TIMELESSQ9UNS1 1208 aa16.14■□□□□ 0.18
DDA1-201ENST00000359866 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms