RNA–Protein interactions for RNA: ENST00000359210.8

POLR3E-202, Transcript of RNA polymerase III subunit E, humanhuman

TSL 1 (best) BASIC

Gene POLR3E, Length 2,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-202ENST00000359210 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
POLR3E-202ENST00000359210 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
POLR3E-202ENST00000359210 ZCCHC6Q5VYS8 1495 aaKnown RBP30.97■■■□□ 2.55
POLR3E-202ENST00000359210 SHROOM4Q9ULL8 1493 aa30.65■■■□□ 2.5
POLR3E-202ENST00000359210 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
POLR3E-202ENST00000359210 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
POLR3E-202ENST00000359210 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
POLR3E-202ENST00000359210 MYO15BQ96JP2 1530 aa29.63■■■□□ 2.33
POLR3E-202ENST00000359210 ABCC9O60706 1549 aa29.54■■■□□ 2.32
POLR3E-202ENST00000359210 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
POLR3E-202ENST00000359210 NACADO15069 1562 aa29.33■■■□□ 2.29
POLR3E-202ENST00000359210 RB1CC1Q8TDY2 1594 aa28.95■■■□□ 2.22
POLR3E-202ENST00000359210 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
POLR3E-202ENST00000359210 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
POLR3E-202ENST00000359210 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
POLR3E-202ENST00000359210 MROH2BQ7Z745 1585 aa28.47■■■□□ 2.15
POLR3E-202ENST00000359210 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
POLR3E-202ENST00000359210 WIZO95785 1651 aa28.29■■■□□ 2.12
POLR3E-202ENST00000359210 BAZ1AQ9NRL2 1556 aaPredicted RBP28.29■■■□□ 2.12
POLR3E-202ENST00000359210 BICRAQ9NZM4 1560 aa28.13■■■□□ 2.09
POLR3E-202ENST00000359210 SMARCA4P51532 1647 aa28.1■■■□□ 2.09
POLR3E-202ENST00000359210 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.08
POLR3E-202ENST00000359210 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
POLR3E-202ENST00000359210 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
POLR3E-202ENST00000359210 LOC105371045A0A1W2PR82 267 aa27.83■■■□□ 2.05
POLR3E-202ENST00000359210 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
POLR3E-202ENST00000359210 CCDC88BA6NC98 1476 aa27.72■■■□□ 2.03
POLR3E-202ENST00000359210 SMARCA2P51531 1590 aa27.72■■■□□ 2.03
POLR3E-202ENST00000359210 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
POLR3E-202ENST00000359210 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
POLR3E-202ENST00000359210 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
POLR3E-202ENST00000359210 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
POLR3E-202ENST00000359210 BAZ1BQ9UIG0 1483 aaKnown RBP27.39■■□□□ 1.97
POLR3E-202ENST00000359210 PCGF6Q9BYE7 350 aa27.24■■□□□ 1.95
POLR3E-202ENST00000359210 EHMT2Q96KQ7 1210 aa27.21■■□□□ 1.95
POLR3E-202ENST00000359210 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
POLR3E-202ENST00000359210 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
POLR3E-202ENST00000359210 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
POLR3E-202ENST00000359210 SOGA1O94964 1423 aa27.02■■□□□ 1.92
POLR3E-202ENST00000359210 HRCP23327 699 aa27■■□□□ 1.91
POLR3E-202ENST00000359210 TRIM26Q12899 539 aaPredicted RBP26.97■■□□□ 1.91
POLR3E-202ENST00000359210 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
POLR3E-202ENST00000359210 EEA1Q15075 1411 aa26.95■■□□□ 1.9
POLR3E-202ENST00000359210 RUSC2Q8N2Y8 1516 aa26.91■■□□□ 1.9
POLR3E-202ENST00000359210 CSRNP3Q8WYN3 585 aa26.86■■□□□ 1.89
POLR3E-202ENST00000359210 TOP2BQ02880 1626 aa26.74■■□□□ 1.87
POLR3E-202ENST00000359210 TNIKQ9UKE5 1360 aa26.72■■□□□ 1.87
POLR3E-202ENST00000359210 CFTRP13569 1480 aa26.71■■□□□ 1.87
POLR3E-202ENST00000359210 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
POLR3E-202ENST00000359210 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
POLR3E-202ENST00000359210 GOLGA3Q08378 1498 aa26.67■■□□□ 1.86
POLR3E-202ENST00000359210 CEP162Q5TB80 1403 aa26.67■■□□□ 1.86
POLR3E-202ENST00000359210 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.85
POLR3E-202ENST00000359210 PPARGC1BQ86YN6 1023 aaKnown RBP26.61■■□□□ 1.85
POLR3E-202ENST00000359210 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
POLR3E-202ENST00000359210 KIF21BO75037 1637 aa26.59■■□□□ 1.85
POLR3E-202ENST00000359210 CUX1P39880 1505 aa26.56■■□□□ 1.84
POLR3E-202ENST00000359210 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
POLR3E-202ENST00000359210 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
POLR3E-202ENST00000359210 RAPGEF2Q9Y4G8 1499 aa26.42■■□□□ 1.82
POLR3E-202ENST00000359210 KIF27Q86VH2 1401 aa26.32■■□□□ 1.8
POLR3E-202ENST00000359210 CLIP1P30622 1438 aa26.31■■□□□ 1.8
POLR3E-202ENST00000359210 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
POLR3E-202ENST00000359210 ERICH3Q5RHP9 1530 aa26.28■■□□□ 1.8
POLR3E-202ENST00000359210 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
POLR3E-202ENST00000359210 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
POLR3E-202ENST00000359210 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
POLR3E-202ENST00000359210 ZEB1P37275 1124 aaPredicted RBP26.17■■□□□ 1.78
POLR3E-202ENST00000359210 NESP48681 1621 aa26.15■■□□□ 1.78
POLR3E-202ENST00000359210 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.78
POLR3E-202ENST00000359210 CUX2O14529 1486 aa26.14■■□□□ 1.78
POLR3E-202ENST00000359210 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
POLR3E-202ENST00000359210 DNMBPQ6XZF7 1577 aa26.06■■□□□ 1.76
POLR3E-202ENST00000359210 LAMC3Q9Y6N6 1575 aa26.06■■□□□ 1.76
POLR3E-202ENST00000359210 IGF1RP08069 1367 aa26.05■■□□□ 1.76
POLR3E-202ENST00000359210 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
POLR3E-202ENST00000359210 DNAJC5BQ9UF47 199 aa25.97■■□□□ 1.75
POLR3E-202ENST00000359210 APLP2Q06481 763 aa25.96■■□□□ 1.75
POLR3E-202ENST00000359210 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
POLR3E-202ENST00000359210 POLA1P09884 1462 aaPredicted RBP25.94■■□□□ 1.74
POLR3E-202ENST00000359210 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
POLR3E-202ENST00000359210 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
POLR3E-202ENST00000359210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.91■■□□□ 1.74
POLR3E-202ENST00000359210 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
POLR3E-202ENST00000359210 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
POLR3E-202ENST00000359210 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
POLR3E-202ENST00000359210 CCER1Q8TC90 406 aaPredicted RBP25.85■■□□□ 1.73
POLR3E-202ENST00000359210 ARHGAP35Q9NRY4 1499 aa25.84■■□□□ 1.73
POLR3E-202ENST00000359210 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
POLR3E-202ENST00000359210 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
POLR3E-202ENST00000359210 CUL7Q14999 1698 aa25.7■■□□□ 1.71
POLR3E-202ENST00000359210 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
POLR3E-202ENST00000359210 HNRNPUL2Q1KMD3 747 aaKnown RBP25.65■■□□□ 1.7
POLR3E-202ENST00000359210 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.69
POLR3E-202ENST00000359210 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
POLR3E-202ENST00000359210 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
POLR3E-202ENST00000359210 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
POLR3E-202ENST00000359210 CTTNBP2Q8WZ74 1663 aa25.55■■□□□ 1.68
POLR3E-202ENST00000359210 FHAD1B1AJZ9 1412 aa25.5■■□□□ 1.67
POLR3E-202ENST00000359210 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms