RNA–Protein interactions for RNA: ENST00000359206.7

ABCB4-203, Transcript of ATP binding cassette subfamily B member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB4, Length 3,923 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB4-203ENST00000359206 NISCHQ9Y2I1 1504 aa17.3■□□□□ 0.36
ABCB4-203ENST00000359206 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
ABCB4-203ENST00000359206 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
ABCB4-203ENST00000359206 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
ABCB4-203ENST00000359206 SHROOM4Q9ULL8 1493 aa14.48□□□□□ -0.09
ABCB4-203ENST00000359206 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
ABCB4-203ENST00000359206 ABCC9O60706 1549 aa14.17□□□□□ -0.14
ABCB4-203ENST00000359206 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
ABCB4-203ENST00000359206 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
ABCB4-203ENST00000359206 NACADO15069 1562 aa13.96□□□□□ -0.17
ABCB4-203ENST00000359206 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
ABCB4-203ENST00000359206 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
ABCB4-203ENST00000359206 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
ABCB4-203ENST00000359206 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
ABCB4-203ENST00000359206 CECR2Q9BXF3 1484 aa13.43□□□□□ -0.26
ABCB4-203ENST00000359206 CHIC1Q5VXU3 224 aa13.42□□□□□ -0.26
ABCB4-203ENST00000359206 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
ABCB4-203ENST00000359206 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
ABCB4-203ENST00000359206 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
ABCB4-203ENST00000359206 WIZO95785 1651 aa13.26□□□□□ -0.29
ABCB4-203ENST00000359206 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
ABCB4-203ENST00000359206 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
ABCB4-203ENST00000359206 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
ABCB4-203ENST00000359206 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
ABCB4-203ENST00000359206 HRCP23327 699 aa13.08□□□□□ -0.32
ABCB4-203ENST00000359206 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
ABCB4-203ENST00000359206 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
ABCB4-203ENST00000359206 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
ABCB4-203ENST00000359206 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
ABCB4-203ENST00000359206 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
ABCB4-203ENST00000359206 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
ABCB4-203ENST00000359206 LOC105371045A0A1W2PR82 267 aa12.96□□□□□ -0.33
ABCB4-203ENST00000359206 EIF4G1Q04637 1599 aaKnown RBP12.95□□□□□ -0.34
ABCB4-203ENST00000359206 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
ABCB4-203ENST00000359206 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
ABCB4-203ENST00000359206 NCAPD3P42695 1498 aa12.87□□□□□ -0.35
ABCB4-203ENST00000359206 PCGF6Q9BYE7 350 aa12.87□□□□□ -0.35
ABCB4-203ENST00000359206 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
ABCB4-203ENST00000359206 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
ABCB4-203ENST00000359206 WRNQ14191 1432 aaPredicted RBP eCLIP12.81□□□□□ -0.36
ABCB4-203ENST00000359206 EEA1Q15075 1411 aa12.74□□□□□ -0.37
ABCB4-203ENST00000359206 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
ABCB4-203ENST00000359206 UBTFP17480 764 aaKnown RBP12.71□□□□□ -0.37
ABCB4-203ENST00000359206 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
ABCB4-203ENST00000359206 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.38
ABCB4-203ENST00000359206 SOGA1O94964 1423 aa12.65□□□□□ -0.38
ABCB4-203ENST00000359206 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
ABCB4-203ENST00000359206 CFTRP13569 1480 aa12.64□□□□□ -0.39
ABCB4-203ENST00000359206 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
ABCB4-203ENST00000359206 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.39
ABCB4-203ENST00000359206 GOLGA3Q08378 1498 aa12.57□□□□□ -0.4
ABCB4-203ENST00000359206 TOP2BQ02880 1626 aa12.56□□□□□ -0.4
ABCB4-203ENST00000359206 CEP164Q9UPV0 1460 aa12.55□□□□□ -0.4
ABCB4-203ENST00000359206 RUSC2Q8N2Y8 1516 aa12.54□□□□□ -0.4
ABCB4-203ENST00000359206 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
ABCB4-203ENST00000359206 KIF27Q86VH2 1401 aa12.52□□□□□ -0.41
ABCB4-203ENST00000359206 BIVM-ERCC5R4GMW8 1640 aa12.5□□□□□ -0.41
ABCB4-203ENST00000359206 FANCD2Q9BXW9 1451 aa12.5□□□□□ -0.41
ABCB4-203ENST00000359206 CEP162Q5TB80 1403 aa12.49□□□□□ -0.41
ABCB4-203ENST00000359206 RANGAP1P46060 587 aaPredicted RBP12.49□□□□□ -0.41
ABCB4-203ENST00000359206 APLP2Q06481 763 aa12.49□□□□□ -0.41
ABCB4-203ENST00000359206 CUX1P39880 1505 aa12.48□□□□□ -0.41
ABCB4-203ENST00000359206 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
ABCB4-203ENST00000359206 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
ABCB4-203ENST00000359206 KIF21BO75037 1637 aa12.44□□□□□ -0.42
ABCB4-203ENST00000359206 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
ABCB4-203ENST00000359206 CUX2O14529 1486 aa12.42□□□□□ -0.42
ABCB4-203ENST00000359206 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
ABCB4-203ENST00000359206 NESP48681 1621 aa12.41□□□□□ -0.42
ABCB4-203ENST00000359206 CLIP1P30622 1438 aa12.4□□□□□ -0.42
ABCB4-203ENST00000359206 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
ABCB4-203ENST00000359206 MYT1Q01538 1121 aa12.4□□□□□ -0.42
ABCB4-203ENST00000359206 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
ABCB4-203ENST00000359206 RAPGEF2Q9Y4G8 1499 aa12.38□□□□□ -0.43
ABCB4-203ENST00000359206 DNMBPQ6XZF7 1577 aa12.36□□□□□ -0.43
ABCB4-203ENST00000359206 ERICH3Q5RHP9 1530 aa12.34□□□□□ -0.43
ABCB4-203ENST00000359206 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
ABCB4-203ENST00000359206 PRXQ9BXM0 1461 aa12.32□□□□□ -0.44
ABCB4-203ENST00000359206 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
ABCB4-203ENST00000359206 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
ABCB4-203ENST00000359206 IGF1RP08069 1367 aa12.29□□□□□ -0.44
ABCB4-203ENST00000359206 POLA1P09884 1462 aaPredicted RBP12.28□□□□□ -0.44
ABCB4-203ENST00000359206 RAD54L2Q9Y4B4 1467 aa12.28□□□□□ -0.44
ABCB4-203ENST00000359206 ZEB1P37275 1124 aaPredicted RBP12.28□□□□□ -0.44
ABCB4-203ENST00000359206 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
ABCB4-203ENST00000359206 ABCA10Q8WWZ4 1543 aa12.25□□□□□ -0.45
ABCB4-203ENST00000359206 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
ABCB4-203ENST00000359206 URB2Q14146 1524 aaKnown RBP12.24□□□□□ -0.45
ABCB4-203ENST00000359206 TDRD9Q8NDG6 1382 aaKnown RBP12.22□□□□□ -0.45
ABCB4-203ENST00000359206 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.45
ABCB4-203ENST00000359206 ATP1B4Q9UN42 357 aaPredicted RBP12.2□□□□□ -0.46
ABCB4-203ENST00000359206 KIF21AQ7Z4S6 1674 aa12.2□□□□□ -0.46
ABCB4-203ENST00000359206 GAPVD1Q14C86 1478 aa12.18□□□□□ -0.46
ABCB4-203ENST00000359206 CCER1Q8TC90 406 aaPredicted RBP12.17□□□□□ -0.46
ABCB4-203ENST00000359206 CUL7Q14999 1698 aa12.15□□□□□ -0.46
ABCB4-203ENST00000359206 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
ABCB4-203ENST00000359206 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
ABCB4-203ENST00000359206 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
ABCB4-203ENST00000359206 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
ABCB4-203ENST00000359206 ARHGAP35Q9NRY4 1499 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms