RNA–Protein interactions for RNA: ENST00000358907.6

R3HDM2-202, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene R3HDM2, Length 3,974 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-202ENST00000358907 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
R3HDM2-202ENST00000358907 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
R3HDM2-202ENST00000358907 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
R3HDM2-202ENST00000358907 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
R3HDM2-202ENST00000358907 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
R3HDM2-202ENST00000358907 HRCP23327 699 aa17.21■□□□□ 0.35
R3HDM2-202ENST00000358907 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
R3HDM2-202ENST00000358907 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
R3HDM2-202ENST00000358907 LOC105371045A0A1W2PR82 267 aa16.75■□□□□ 0.27
R3HDM2-202ENST00000358907 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
R3HDM2-202ENST00000358907 EHMT2Q96KQ7 1210 aa16.67■□□□□ 0.26
R3HDM2-202ENST00000358907 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
R3HDM2-202ENST00000358907 FAM9AQ8IZU1 332 aaPredicted RBP16.56■□□□□ 0.24
R3HDM2-202ENST00000358907 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
R3HDM2-202ENST00000358907 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
R3HDM2-202ENST00000358907 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
R3HDM2-202ENST00000358907 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
R3HDM2-202ENST00000358907 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
R3HDM2-202ENST00000358907 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
R3HDM2-202ENST00000358907 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
R3HDM2-202ENST00000358907 CENPBP07199 599 aaPredicted RBP16.13■□□□□ 0.17
R3HDM2-202ENST00000358907 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
R3HDM2-202ENST00000358907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
R3HDM2-202ENST00000358907 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.16
R3HDM2-202ENST00000358907 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
R3HDM2-202ENST00000358907 DIEXFQ68CQ4 756 aaKnown RBP15.94■□□□□ 0.14
R3HDM2-202ENST00000358907 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
R3HDM2-202ENST00000358907 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
R3HDM2-202ENST00000358907 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
R3HDM2-202ENST00000358907 MYT1Q01538 1121 aa15.86■□□□□ 0.13
R3HDM2-202ENST00000358907 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.11
R3HDM2-202ENST00000358907 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
R3HDM2-202ENST00000358907 APLP2Q06481 763 aa15.68■□□□□ 0.1
R3HDM2-202ENST00000358907 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
R3HDM2-202ENST00000358907 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
R3HDM2-202ENST00000358907 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
R3HDM2-202ENST00000358907 ZNF316A6NFI3 1004 aaPredicted RBP15.61■□□□□ 0.09
R3HDM2-202ENST00000358907 ABCC9O60706 1549 aa15.53■□□□□ 0.08
R3HDM2-202ENST00000358907 RB1CC1Q8TDY2 1594 aa15.52■□□□□ 0.08
R3HDM2-202ENST00000358907 MIER1Q8N108 512 aa15.43■□□□□ 0.06
R3HDM2-202ENST00000358907 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
R3HDM2-202ENST00000358907 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
R3HDM2-202ENST00000358907 CEP162Q5TB80 1403 aa15.32■□□□□ 0.04
R3HDM2-202ENST00000358907 ITGAEP38570 1179 aa15.24■□□□□ 0.03
R3HDM2-202ENST00000358907 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
R3HDM2-202ENST00000358907 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
R3HDM2-202ENST00000358907 BCANQ96GW7 911 aa15.18■□□□□ 0.02
R3HDM2-202ENST00000358907 NEFLP07196 543 aa15.16■□□□□ 0.02
R3HDM2-202ENST00000358907 SOGA1O94964 1423 aa15.16■□□□□ 0.02
R3HDM2-202ENST00000358907 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
R3HDM2-202ENST00000358907 WIZO95785 1651 aa15.14■□□□□ 0.01
R3HDM2-202ENST00000358907 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
R3HDM2-202ENST00000358907 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
R3HDM2-202ENST00000358907 GOLGA3Q08378 1498 aa15.07■□□□□ 0
R3HDM2-202ENST00000358907 CLSPNQ9HAW4 1339 aa15.06■□□□□ 0
R3HDM2-202ENST00000358907 CLIP1P30622 1438 aa15.06■□□□□ 0
R3HDM2-202ENST00000358907 EEA1Q15075 1411 aa15.06■□□□□ 0
R3HDM2-202ENST00000358907 SUPT16HQ9Y5B9 1047 aaKnown RBP15.05■□□□□ 0
R3HDM2-202ENST00000358907 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
R3HDM2-202ENST00000358907 ATP1B4Q9UN42 357 aaPredicted RBP15.04■□□□□ -0
R3HDM2-202ENST00000358907 ERICH6Q7L0X2 663 aa15.02■□□□□ -0
R3HDM2-202ENST00000358907 NACADO15069 1562 aa15□□□□□ -0.01
R3HDM2-202ENST00000358907 BAZ1AQ9NRL2 1556 aaPredicted RBP14.99□□□□□ -0.01
R3HDM2-202ENST00000358907 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
R3HDM2-202ENST00000358907 FKBP8Q14318 412 aa14.98□□□□□ -0.01
R3HDM2-202ENST00000358907 ANP32EQ9BTT0 268 aa14.92□□□□□ -0.02
R3HDM2-202ENST00000358907 DDX10Q13206 875 aaKnown RBP14.92□□□□□ -0.02
R3HDM2-202ENST00000358907 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
R3HDM2-202ENST00000358907 FAM50AQ14320 339 aaKnown RBP14.88□□□□□ -0.03
R3HDM2-202ENST00000358907 TSHZ2Q9NRE2 1034 aa14.88□□□□□ -0.03
R3HDM2-202ENST00000358907 VPS8Q8N3P4 1428 aa14.87□□□□□ -0.03
R3HDM2-202ENST00000358907 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
R3HDM2-202ENST00000358907 ANP32CO43423 234 aa14.84□□□□□ -0.03
R3HDM2-202ENST00000358907 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
R3HDM2-202ENST00000358907 HIRIP3Q9BW71 556 aaPredicted RBP14.82□□□□□ -0.04
R3HDM2-202ENST00000358907 KCNH8Q96L42 1107 aa14.79□□□□□ -0.04
R3HDM2-202ENST00000358907 KANK4Q5T7N3 995 aaPredicted RBP14.78□□□□□ -0.04
R3HDM2-202ENST00000358907 DHX57Q6P158 1386 aaKnown RBP14.77□□□□□ -0.05
R3HDM2-202ENST00000358907 SMARCA2P51531 1590 aa14.74□□□□□ -0.05
R3HDM2-202ENST00000358907 BCL11AQ9H165 835 aa14.73□□□□□ -0.05
R3HDM2-202ENST00000358907 CDK11AQ9UQ88 783 aaPredicted RBP14.72□□□□□ -0.05
R3HDM2-202ENST00000358907 RAPGEF2Q9Y4G8 1499 aa14.72□□□□□ -0.05
R3HDM2-202ENST00000358907 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
R3HDM2-202ENST00000358907 SIN3AQ96ST3 1273 aa14.7□□□□□ -0.06
R3HDM2-202ENST00000358907 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
R3HDM2-202ENST00000358907 RBM19Q9Y4C8 960 aaKnown RBP14.67□□□□□ -0.06
R3HDM2-202ENST00000358907 IRX6P78412 446 aaPredicted RBP14.67□□□□□ -0.06
R3HDM2-202ENST00000358907 CCNB3Q8WWL7 1395 aa14.67□□□□□ -0.06
R3HDM2-202ENST00000358907 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
R3HDM2-202ENST00000358907 CNGB1Q14028 1251 aaPredicted RBP14.65□□□□□ -0.06
R3HDM2-202ENST00000358907 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
R3HDM2-202ENST00000358907 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
R3HDM2-202ENST00000358907 TONSLQ96HA7 1378 aa14.59□□□□□ -0.07
R3HDM2-202ENST00000358907 RAB3GAP2Q9H2M9 1393 aa14.59□□□□□ -0.07
R3HDM2-202ENST00000358907 KIF21BO75037 1637 aa14.58□□□□□ -0.08
R3HDM2-202ENST00000358907 POLR3GLQ9BT43 218 aa14.55□□□□□ -0.08
R3HDM2-202ENST00000358907 SYNJ1O43426 1573 aa14.53□□□□□ -0.08
R3HDM2-202ENST00000358907 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
R3HDM2-202ENST00000358907 CCER2I3L3R5 266 aa14.5□□□□□ -0.09
R3HDM2-202ENST00000358907 SETD5Q9C0A6 1442 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms