RNA–Protein interactions for RNA: ENST00000357720.8

TRMT1-202, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TRMT1, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-202ENST00000357720 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.35
TRMT1-202ENST00000357720 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
TRMT1-202ENST00000357720 ZCCHC6Q5VYS8 1495 aaKnown RBP25.06■■□□□ 1.6
TRMT1-202ENST00000357720 DCAF1Q9Y4B6 1507 aa24.58■■□□□ 1.53
TRMT1-202ENST00000357720 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
TRMT1-202ENST00000357720 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
TRMT1-202ENST00000357720 ABCC9O60706 1549 aa24.17■■□□□ 1.46
TRMT1-202ENST00000357720 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
TRMT1-202ENST00000357720 NACADO15069 1562 aa23.96■■□□□ 1.43
TRMT1-202ENST00000357720 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
TRMT1-202ENST00000357720 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
TRMT1-202ENST00000357720 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
TRMT1-202ENST00000357720 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
TRMT1-202ENST00000357720 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
TRMT1-202ENST00000357720 CECR2Q9BXF3 1484 aa23.13■■□□□ 1.29
TRMT1-202ENST00000357720 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
TRMT1-202ENST00000357720 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
TRMT1-202ENST00000357720 BAZ1AQ9NRL2 1556 aaPredicted RBP22.95■■□□□ 1.26
TRMT1-202ENST00000357720 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
TRMT1-202ENST00000357720 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.256e-7■■■□□ 15.9
TRMT1-202ENST00000357720 WIZO95785 1651 aa22.87■■□□□ 1.25
TRMT1-202ENST00000357720 SMARCA4P51532 1647 aa22.83■■□□□ 1.24
TRMT1-202ENST00000357720 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
TRMT1-202ENST00000357720 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
TRMT1-202ENST00000357720 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
TRMT1-202ENST00000357720 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
TRMT1-202ENST00000357720 ATAD2BQ9ULI0 1458 aa22.37■■□□□ 1.17
TRMT1-202ENST00000357720 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
TRMT1-202ENST00000357720 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
TRMT1-202ENST00000357720 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.15
TRMT1-202ENST00000357720 NCAPD3P42695 1498 aa22.12■■□□□ 1.13
TRMT1-202ENST00000357720 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
TRMT1-202ENST00000357720 LOC105371045A0A1W2PR82 267 aa22.05■■□□□ 1.12
TRMT1-202ENST00000357720 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
TRMT1-202ENST00000357720 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
TRMT1-202ENST00000357720 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
TRMT1-202ENST00000357720 WRNQ14191 1432 aaPredicted RBP eCLIP21.84■■□□□ 1.09
TRMT1-202ENST00000357720 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
TRMT1-202ENST00000357720 CFTRP13569 1480 aa21.72■■□□□ 1.07
TRMT1-202ENST00000357720 SOGA1O94964 1423 aa21.69■■□□□ 1.06
TRMT1-202ENST00000357720 EEA1Q15075 1411 aa21.66■■□□□ 1.06
TRMT1-202ENST00000357720 EHMT2Q96KQ7 1210 aa21.64■■□□□ 1.05
TRMT1-202ENST00000357720 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
TRMT1-202ENST00000357720 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
TRMT1-202ENST00000357720 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
TRMT1-202ENST00000357720 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
TRMT1-202ENST00000357720 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
TRMT1-202ENST00000357720 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.05
TRMT1-202ENST00000357720 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
TRMT1-202ENST00000357720 CUX1P39880 1505 aa21.51■■□□□ 1.03
TRMT1-202ENST00000357720 GOLGA3Q08378 1498 aa21.39■■□□□ 1.02
TRMT1-202ENST00000357720 KIF21BO75037 1637 aa21.38■■□□□ 1.01
TRMT1-202ENST00000357720 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
TRMT1-202ENST00000357720 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
TRMT1-202ENST00000357720 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
TRMT1-202ENST00000357720 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
TRMT1-202ENST00000357720 NESP48681 1621 aa21.33■■□□□ 1
TRMT1-202ENST00000357720 LAMC3Q9Y6N6 1575 aa21.32■■□□□ 1
TRMT1-202ENST00000357720 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
TRMT1-202ENST00000357720 CEP162Q5TB80 1403 aa21.3■■□□□ 1
TRMT1-202ENST00000357720 KIF27Q86VH2 1401 aa21.25■□□□□ 0.99
TRMT1-202ENST00000357720 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
TRMT1-202ENST00000357720 RAPGEF2Q9Y4G8 1499 aa21.23■□□□□ 0.99
TRMT1-202ENST00000357720 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
TRMT1-202ENST00000357720 DNMBPQ6XZF7 1577 aa21.21■□□□□ 0.99
TRMT1-202ENST00000357720 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
TRMT1-202ENST00000357720 ERICH3Q5RHP9 1530 aa21.17■□□□□ 0.98
TRMT1-202ENST00000357720 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
TRMT1-202ENST00000357720 CUX2O14529 1486 aa21.15■□□□□ 0.98
TRMT1-202ENST00000357720 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.97
TRMT1-202ENST00000357720 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.96
TRMT1-202ENST00000357720 URB2Q14146 1524 aaKnown RBP21.07■□□□□ 0.96
TRMT1-202ENST00000357720 CLIP1P30622 1438 aa21.07■□□□□ 0.96
TRMT1-202ENST00000357720 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
TRMT1-202ENST00000357720 IGF1RP08069 1367 aa21.04■□□□□ 0.96
TRMT1-202ENST00000357720 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
TRMT1-202ENST00000357720 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
TRMT1-202ENST00000357720 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
TRMT1-202ENST00000357720 HRCP23327 699 aa20.96■□□□□ 0.95
TRMT1-202ENST00000357720 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
TRMT1-202ENST00000357720 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
TRMT1-202ENST00000357720 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
TRMT1-202ENST00000357720 RANGAP1P46060 587 aaPredicted RBP20.9■□□□□ 0.94
TRMT1-202ENST00000357720 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
TRMT1-202ENST00000357720 CUL7Q14999 1698 aa20.84■□□□□ 0.93
TRMT1-202ENST00000357720 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
TRMT1-202ENST00000357720 ARAP1Q96P48 1450 aa20.83■□□□□ 0.93
TRMT1-202ENST00000357720 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
TRMT1-202ENST00000357720 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
TRMT1-202ENST00000357720 GAPVD1Q14C86 1478 aa20.78■□□□□ 0.92
TRMT1-202ENST00000357720 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
TRMT1-202ENST00000357720 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
TRMT1-202ENST00000357720 WDR62O43379 1518 aa20.74■□□□□ 0.91
TRMT1-202ENST00000357720 APLP2Q06481 763 aa20.72■□□□□ 0.91
TRMT1-202ENST00000357720 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
TRMT1-202ENST00000357720 CTTNBP2Q8WZ74 1663 aa20.68■□□□□ 0.9
TRMT1-202ENST00000357720 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
TRMT1-202ENST00000357720 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
TRMT1-202ENST00000357720 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
TRMT1-202ENST00000357720 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.894e-12■■■□□ 18.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms