RNA–Protein interactions for RNA: ENST00000357154.7

SPOCK3-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK3, Length 2,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-201ENST00000357154 NISCHQ9Y2I1 1504 aa31■■■□□ 2.55
SPOCK3-201ENST00000357154 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
SPOCK3-201ENST00000357154 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
SPOCK3-201ENST00000357154 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
SPOCK3-201ENST00000357154 MYO15BQ96JP2 1530 aa26.05■■□□□ 1.76
SPOCK3-201ENST00000357154 NACADO15069 1562 aa25.61■■□□□ 1.69
SPOCK3-201ENST00000357154 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.65
SPOCK3-201ENST00000357154 ABCC9O60706 1549 aa25.33■■□□□ 1.64
SPOCK3-201ENST00000357154 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
SPOCK3-201ENST00000357154 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
SPOCK3-201ENST00000357154 HRCP23327 699 aa24.88■■□□□ 1.57
SPOCK3-201ENST00000357154 UNC13AQ9UPW8 1703 aa24.87■■□□□ 1.57
SPOCK3-201ENST00000357154 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
SPOCK3-201ENST00000357154 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
SPOCK3-201ENST00000357154 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
SPOCK3-201ENST00000357154 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
SPOCK3-201ENST00000357154 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
SPOCK3-201ENST00000357154 PPARGC1BQ86YN6 1023 aaKnown RBP24.08■■□□□ 1.45
SPOCK3-201ENST00000357154 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
SPOCK3-201ENST00000357154 PEG3Q9GZU2 1588 aa24.01■■□□□ 1.43
SPOCK3-201ENST00000357154 TRIM26Q12899 539 aaPredicted RBP23.97■■□□□ 1.43
SPOCK3-201ENST00000357154 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
SPOCK3-201ENST00000357154 LOC105371045A0A1W2PR82 267 aa23.92■■□□□ 1.42
SPOCK3-201ENST00000357154 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
SPOCK3-201ENST00000357154 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
SPOCK3-201ENST00000357154 MROH2BQ7Z745 1585 aa23.71■■□□□ 1.39
SPOCK3-201ENST00000357154 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
SPOCK3-201ENST00000357154 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
SPOCK3-201ENST00000357154 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
SPOCK3-201ENST00000357154 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
SPOCK3-201ENST00000357154 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.36
SPOCK3-201ENST00000357154 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
SPOCK3-201ENST00000357154 WIZO95785 1651 aa23.53■■□□□ 1.36
SPOCK3-201ENST00000357154 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
SPOCK3-201ENST00000357154 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
SPOCK3-201ENST00000357154 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
SPOCK3-201ENST00000357154 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
SPOCK3-201ENST00000357154 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
SPOCK3-201ENST00000357154 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
SPOCK3-201ENST00000357154 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
SPOCK3-201ENST00000357154 SCAF1Q9H7N4 1312 aaKnown RBP23.17■■□□□ 1.3
SPOCK3-201ENST00000357154 FAM9AQ8IZU1 332 aaPredicted RBP23.08■■□□□ 1.29
SPOCK3-201ENST00000357154 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
SPOCK3-201ENST00000357154 ACIN1Q9UKV3 1341 aaKnown RBP22.86■■□□□ 1.25
SPOCK3-201ENST00000357154 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
SPOCK3-201ENST00000357154 CFTRP13569 1480 aa22.81■■□□□ 1.24
SPOCK3-201ENST00000357154 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
SPOCK3-201ENST00000357154 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
SPOCK3-201ENST00000357154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
SPOCK3-201ENST00000357154 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
SPOCK3-201ENST00000357154 CENPBP07199 599 aaPredicted RBP22.7■■□□□ 1.22
SPOCK3-201ENST00000357154 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
SPOCK3-201ENST00000357154 DIEXFQ68CQ4 756 aaKnown RBP22.67■■□□□ 1.22
SPOCK3-201ENST00000357154 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
SPOCK3-201ENST00000357154 MYT1Q01538 1121 aa22.62■■□□□ 1.21
SPOCK3-201ENST00000357154 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
SPOCK3-201ENST00000357154 GTF3C3Q9Y5Q9 886 aa22.54■■□□□ 1.2
SPOCK3-201ENST00000357154 TNIKQ9UKE5 1360 aa22.5■■□□□ 1.19
SPOCK3-201ENST00000357154 CEP162Q5TB80 1403 aa22.5■■□□□ 1.19
SPOCK3-201ENST00000357154 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
SPOCK3-201ENST00000357154 EEA1Q15075 1411 aa22.47■■□□□ 1.19
SPOCK3-201ENST00000357154 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
SPOCK3-201ENST00000357154 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
SPOCK3-201ENST00000357154 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
SPOCK3-201ENST00000357154 DNMBPQ6XZF7 1577 aa22.37■■□□□ 1.17
SPOCK3-201ENST00000357154 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
SPOCK3-201ENST00000357154 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
SPOCK3-201ENST00000357154 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.17
SPOCK3-201ENST00000357154 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
SPOCK3-201ENST00000357154 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
SPOCK3-201ENST00000357154 SOGA1O94964 1423 aa22.31■■□□□ 1.16
SPOCK3-201ENST00000357154 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
SPOCK3-201ENST00000357154 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
SPOCK3-201ENST00000357154 CUX1P39880 1505 aa22.27■■□□□ 1.15
SPOCK3-201ENST00000357154 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
SPOCK3-201ENST00000357154 WDR62O43379 1518 aa22.25■■□□□ 1.15
SPOCK3-201ENST00000357154 THOC2Q8NI27 1593 aaKnown RBP22.22■■□□□ 1.15
SPOCK3-201ENST00000357154 NESP48681 1621 aa22.2■■□□□ 1.14
SPOCK3-201ENST00000357154 UBTFP17480 764 aaKnown RBP22.19■■□□□ 1.14
SPOCK3-201ENST00000357154 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
SPOCK3-201ENST00000357154 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
SPOCK3-201ENST00000357154 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
SPOCK3-201ENST00000357154 TOPBP1Q92547 1522 aa22.15■■□□□ 1.14
SPOCK3-201ENST00000357154 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
SPOCK3-201ENST00000357154 KIF21BO75037 1637 aa22.09■■□□□ 1.13
SPOCK3-201ENST00000357154 MIER1Q8N108 512 aa22.07■■□□□ 1.12
SPOCK3-201ENST00000357154 ABCA10Q8WWZ4 1543 aa22.04■■□□□ 1.12
SPOCK3-201ENST00000357154 TARBP1Q13395 1621 aaKnown RBP22.04■■□□□ 1.12
SPOCK3-201ENST00000357154 YTHDC1Q96MU7 727 aaKnown RBP22.01■■□□□ 1.11
SPOCK3-201ENST00000357154 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
SPOCK3-201ENST00000357154 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
SPOCK3-201ENST00000357154 CLIP1P30622 1438 aa21.98■■□□□ 1.11
SPOCK3-201ENST00000357154 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
SPOCK3-201ENST00000357154 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
SPOCK3-201ENST00000357154 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
SPOCK3-201ENST00000357154 CLSPNQ9HAW4 1339 aa21.95■■□□□ 1.1
SPOCK3-201ENST00000357154 CUL7Q14999 1698 aa21.92■■□□□ 1.1
SPOCK3-201ENST00000357154 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
SPOCK3-201ENST00000357154 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
SPOCK3-201ENST00000357154 APLP2Q06481 763 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms