RNA–Protein interactions for RNA: ENST00000355636.10

PMFBP1-202, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PMFBP1, Length 3,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-202ENST00000355636 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
PMFBP1-202ENST00000355636 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
PMFBP1-202ENST00000355636 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
PMFBP1-202ENST00000355636 SUPT5HO00267 1087 aaKnown RBP12.22□□□□□ -0.45
PMFBP1-202ENST00000355636 ABCC9O60706 1549 aa12.21□□□□□ -0.45
PMFBP1-202ENST00000355636 CCDC180Q9P1Z9 1646 aa12.02□□□□□ -0.48
PMFBP1-202ENST00000355636 ZCCHC6Q5VYS8 1495 aaKnown RBP11.91□□□□□ -0.5
PMFBP1-202ENST00000355636 PABPN1Q86U42 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
PMFBP1-202ENST00000355636 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
PMFBP1-202ENST00000355636 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
PMFBP1-202ENST00000355636 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
PMFBP1-202ENST00000355636 FAM9AQ8IZU1 332 aaPredicted RBP11.42□□□□□ -0.58
PMFBP1-202ENST00000355636 DCAF1Q9Y4B6 1507 aa11.42□□□□□ -0.58
PMFBP1-202ENST00000355636 NACADO15069 1562 aa11.41□□□□□ -0.58
PMFBP1-202ENST00000355636 RB1CC1Q8TDY2 1594 aa11.41□□□□□ -0.58
PMFBP1-202ENST00000355636 CECR2Q9BXF3 1484 aa11.39□□□□□ -0.59
PMFBP1-202ENST00000355636 MYT1Q01538 1121 aa11.38□□□□□ -0.59
PMFBP1-202ENST00000355636 CHIC1Q5VXU3 224 aa11.31□□□□□ -0.6
PMFBP1-202ENST00000355636 RSF1Q96T23 1441 aaPredicted RBP11.28□□□□□ -0.6
PMFBP1-202ENST00000355636 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
PMFBP1-202ENST00000355636 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
PMFBP1-202ENST00000355636 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
PMFBP1-202ENST00000355636 MYO15BQ96JP2 1530 aa11.19□□□□□ -0.62
PMFBP1-202ENST00000355636 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
PMFBP1-202ENST00000355636 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
PMFBP1-202ENST00000355636 WIZO95785 1651 aa11.1□□□□□ -0.63
PMFBP1-202ENST00000355636 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
PMFBP1-202ENST00000355636 UNC13AQ9UPW8 1703 aa11.03□□□□□ -0.64
PMFBP1-202ENST00000355636 BICRAQ9NZM4 1560 aa11.03□□□□□ -0.64
PMFBP1-202ENST00000355636 PPARGC1BQ86YN6 1023 aaKnown RBP11.01□□□□□ -0.65
PMFBP1-202ENST00000355636 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
PMFBP1-202ENST00000355636 BAZ1AQ9NRL2 1556 aaPredicted RBP10.99□□□□□ -0.65
PMFBP1-202ENST00000355636 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
PMFBP1-202ENST00000355636 CCDC88BA6NC98 1476 aa10.92□□□□□ -0.66
PMFBP1-202ENST00000355636 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
PMFBP1-202ENST00000355636 UBTFP17480 764 aaKnown RBP10.9□□□□□ -0.66
PMFBP1-202ENST00000355636 ATAD2BQ9ULI0 1458 aa10.87□□□□□ -0.67
PMFBP1-202ENST00000355636 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
PMFBP1-202ENST00000355636 PCGF6Q9BYE7 350 aa10.83□□□□□ -0.68
PMFBP1-202ENST00000355636 BCL11AQ9H165 835 aa10.83□□□□□ -0.68
PMFBP1-202ENST00000355636 SLC24A1O60721 1099 aa10.83□□□□□ -0.68
PMFBP1-202ENST00000355636 EIF4G1Q04637 1599 aaKnown RBP10.81□□□□□ -0.68
PMFBP1-202ENST00000355636 TOP2AP11388 1531 aaKnown RBP10.77□□□□□ -0.68
PMFBP1-202ENST00000355636 ERICH6Q7L0X2 663 aa10.75□□□□□ -0.69
PMFBP1-202ENST00000355636 SMARCA2P51531 1590 aa10.73□□□□□ -0.69
PMFBP1-202ENST00000355636 SOGA1O94964 1423 aa10.72□□□□□ -0.69
PMFBP1-202ENST00000355636 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
PMFBP1-202ENST00000355636 CC2D2AQ9P2K1 1620 aa10.7□□□□□ -0.7
PMFBP1-202ENST00000355636 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
PMFBP1-202ENST00000355636 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
PMFBP1-202ENST00000355636 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
PMFBP1-202ENST00000355636 RUSC2Q8N2Y8 1516 aa10.68□□□□□ -0.7
PMFBP1-202ENST00000355636 NESP48681 1621 aa10.66□□□□□ -0.7
PMFBP1-202ENST00000355636 NCAPD3P42695 1498 aa10.65□□□□□ -0.71
PMFBP1-202ENST00000355636 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
PMFBP1-202ENST00000355636 FBLN2P98095 1184 aa10.61□□□□□ -0.71
PMFBP1-202ENST00000355636 HRCP23327 699 aa10.6□□□□□ -0.71
PMFBP1-202ENST00000355636 CADPSQ9ULU8 1353 aa10.59□□□□□ -0.71
PMFBP1-202ENST00000355636 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
PMFBP1-202ENST00000355636 APLP2Q06481 763 aa10.54□□□□□ -0.72
PMFBP1-202ENST00000355636 TDRD9Q8NDG6 1382 aaKnown RBP10.51□□□□□ -0.73
PMFBP1-202ENST00000355636 PEG3Q9GZU2 1588 aa10.51□□□□□ -0.73
PMFBP1-202ENST00000355636 SYNJ1O43426 1573 aa10.49□□□□□ -0.73
PMFBP1-202ENST00000355636 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
PMFBP1-202ENST00000355636 ITGAEP38570 1179 aa10.48□□□□□ -0.73
PMFBP1-202ENST00000355636 CFTRP13569 1480 aa10.47□□□□□ -0.73
PMFBP1-202ENST00000355636 HMGXB3Q12766 1538 aa10.47□□□□□ -0.73
PMFBP1-202ENST00000355636 RAD54L2Q9Y4B4 1467 aa10.47□□□□□ -0.73
PMFBP1-202ENST00000355636 CUX2O14529 1486 aa10.46□□□□□ -0.73
PMFBP1-202ENST00000355636 ERCC6Q03468 1493 aa10.46□□□□□ -0.74
PMFBP1-202ENST00000355636 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
PMFBP1-202ENST00000355636 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
PMFBP1-202ENST00000355636 CUX1P39880 1505 aa10.41□□□□□ -0.74
PMFBP1-202ENST00000355636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.41□□□□□ -0.74
PMFBP1-202ENST00000355636 RAPGEF2Q9Y4G8 1499 aa10.41□□□□□ -0.74
PMFBP1-202ENST00000355636 CEP162Q5TB80 1403 aa10.4□□□□□ -0.74
PMFBP1-202ENST00000355636 PDS5BQ9NTI5 1447 aa10.39□□□□□ -0.75
PMFBP1-202ENST00000355636 KIF27Q86VH2 1401 aa10.39□□□□□ -0.75
PMFBP1-202ENST00000355636 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
PMFBP1-202ENST00000355636 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
PMFBP1-202ENST00000355636 CENPBP07199 599 aaPredicted RBP10.35□□□□□ -0.75
PMFBP1-202ENST00000355636 CARMIL1Q5VZK9 1371 aa10.35□□□□□ -0.75
PMFBP1-202ENST00000355636 CLIP1P30622 1438 aa10.34□□□□□ -0.75
PMFBP1-202ENST00000355636 GOLGA3Q08378 1498 aa10.34□□□□□ -0.75
PMFBP1-202ENST00000355636 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
PMFBP1-202ENST00000355636 AQRO60306 1485 aaKnown RBP eCLIP10.34□□□□□ -0.753e-8■■■■■ 38.2
PMFBP1-202ENST00000355636 IGF1RP08069 1367 aa10.33□□□□□ -0.76
PMFBP1-202ENST00000355636 TNIKQ9UKE5 1360 aa10.32□□□□□ -0.76
PMFBP1-202ENST00000355636 EIF5BO60841 1220 aaKnown RBP10.32□□□□□ -0.76
PMFBP1-202ENST00000355636 CCER1Q8TC90 406 aaPredicted RBP10.32□□□□□ -0.76
PMFBP1-202ENST00000355636 PLEKHG5O94827 1062 aa10.32□□□□□ -0.76
PMFBP1-202ENST00000355636 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
PMFBP1-202ENST00000355636 EEA1Q15075 1411 aa10.29□□□□□ -0.76
PMFBP1-202ENST00000355636 POLA1P09884 1462 aaPredicted RBP10.29□□□□□ -0.76
PMFBP1-202ENST00000355636 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
PMFBP1-202ENST00000355636 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
PMFBP1-202ENST00000355636 KANK4Q5T7N3 995 aaPredicted RBP10.28□□□□□ -0.76
PMFBP1-202ENST00000355636 FAM50AQ14320 339 aaKnown RBP10.27□□□□□ -0.77
PMFBP1-202ENST00000355636 GTF3C3Q9Y5Q9 886 aa10.24□□□□□ -0.77
PMFBP1-202ENST00000355636 ZNF608Q9ULD9 1512 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms