RNA–Protein interactions for RNA: ENST00000355628.9

FAM208A-201, Transcript of family with sequence similarity 208 member A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM208A, Length 5,239 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-201ENST00000355628 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
FAM208A-201ENST00000355628 NISCHQ9Y2I1 1504 aa28.03■■■□□ 2.08
FAM208A-201ENST00000355628 SHROOM4Q9ULL8 1493 aa25.79■■□□□ 1.72
FAM208A-201ENST00000355628 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
FAM208A-201ENST00000355628 PELP1Q8IZL8 1130 aaKnown RBP24.79■■□□□ 1.56
FAM208A-201ENST00000355628 ABCC9O60706 1549 aa24.79■■□□□ 1.56
FAM208A-201ENST00000355628 EHMT2Q96KQ7 1210 aa24.58■■□□□ 1.53
FAM208A-201ENST00000355628 FAM9AQ8IZU1 332 aaPredicted RBP24.5■■□□□ 1.51
FAM208A-201ENST00000355628 APLP2Q06481 763 aa24.29■■□□□ 1.48
FAM208A-201ENST00000355628 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
FAM208A-201ENST00000355628 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
FAM208A-201ENST00000355628 ZEB1P37275 1124 aaPredicted RBP24.22■■□□□ 1.47
FAM208A-201ENST00000355628 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
FAM208A-201ENST00000355628 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
FAM208A-201ENST00000355628 RANGAP1P46060 587 aaPredicted RBP23.93■■□□□ 1.42
FAM208A-201ENST00000355628 ATP1B4Q9UN42 357 aaPredicted RBP23.79■■□□□ 1.4
FAM208A-201ENST00000355628 CCER1Q8TC90 406 aaPredicted RBP23.74■■□□□ 1.39
FAM208A-201ENST00000355628 MYT1Q01538 1121 aa23.74■■□□□ 1.39
FAM208A-201ENST00000355628 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
FAM208A-201ENST00000355628 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.38
FAM208A-201ENST00000355628 ERICH6Q7L0X2 663 aa23.57■■□□□ 1.36
FAM208A-201ENST00000355628 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
FAM208A-201ENST00000355628 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
FAM208A-201ENST00000355628 HRCP23327 699 aa23.41■■□□□ 1.34
FAM208A-201ENST00000355628 NEFLP07196 543 aa23.32■■□□□ 1.32
FAM208A-201ENST00000355628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
FAM208A-201ENST00000355628 HNRNPUL2Q1KMD3 747 aaKnown RBP23.31■■□□□ 1.32
FAM208A-201ENST00000355628 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
FAM208A-201ENST00000355628 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.3
FAM208A-201ENST00000355628 MYT1LQ9UL68 1186 aa23.18■■□□□ 1.3
FAM208A-201ENST00000355628 YTHDC1Q96MU7 727 aaKnown RBP23.16■■□□□ 1.3
FAM208A-201ENST00000355628 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
FAM208A-201ENST00000355628 FBLN2P98095 1184 aa23.12■■□□□ 1.29
FAM208A-201ENST00000355628 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
FAM208A-201ENST00000355628 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
FAM208A-201ENST00000355628 NACADO15069 1562 aa22.91■■□□□ 1.26
FAM208A-201ENST00000355628 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.24
FAM208A-201ENST00000355628 ITGAEP38570 1179 aa22.64■■□□□ 1.21
FAM208A-201ENST00000355628 DIEXFQ68CQ4 756 aaKnown RBP22.58■■□□□ 1.21
FAM208A-201ENST00000355628 DAXXQ9UER7 740 aaPredicted RBP22.51■■□□□ 1.19
FAM208A-201ENST00000355628 NPM1P06748 294 aaKnown RBP eCLIP22.41■■□□□ 1.18
FAM208A-201ENST00000355628 BAZ1BQ9UIG0 1483 aaKnown RBP22.37■■□□□ 1.17
FAM208A-201ENST00000355628 ERCC6Q03468 1493 aa22.36■■□□□ 1.17
FAM208A-201ENST00000355628 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
FAM208A-201ENST00000355628 ARID3CA6NKF2 412 aa22.33■■□□□ 1.17
FAM208A-201ENST00000355628 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.16
FAM208A-201ENST00000355628 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
FAM208A-201ENST00000355628 FAM50AQ14320 339 aaKnown RBP22.28■■□□□ 1.16
FAM208A-201ENST00000355628 DCAF1Q9Y4B6 1507 aa22.28■■□□□ 1.16
FAM208A-201ENST00000355628 POLR3GLQ9BT43 218 aa22.27■■□□□ 1.16
FAM208A-201ENST00000355628 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
FAM208A-201ENST00000355628 GTF3C3Q9Y5Q9 886 aa22.2■■□□□ 1.14
FAM208A-201ENST00000355628 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.14
FAM208A-201ENST00000355628 RSF1Q96T23 1441 aaPredicted RBP22.11■■□□□ 1.13
FAM208A-201ENST00000355628 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
FAM208A-201ENST00000355628 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
FAM208A-201ENST00000355628 TRIM52Q96A61 297 aa22.09■■□□□ 1.13
FAM208A-201ENST00000355628 ESF1Q9H501 851 aaKnown RBP22.06■■□□□ 1.12
FAM208A-201ENST00000355628 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
FAM208A-201ENST00000355628 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
FAM208A-201ENST00000355628 ANP32CO43423 234 aa21.99■■□□□ 1.11
FAM208A-201ENST00000355628 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
FAM208A-201ENST00000355628 CNGB1Q14028 1251 aaPredicted RBP21.95■■□□□ 1.1
FAM208A-201ENST00000355628 SLC4A1APQ9BWU0 796 aaKnown RBP21.92■■□□□ 1.1
FAM208A-201ENST00000355628 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
FAM208A-201ENST00000355628 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
FAM208A-201ENST00000355628 NEUROD1Q13562 356 aa21.9■■□□□ 1.1
FAM208A-201ENST00000355628 BCANQ96GW7 911 aa21.89■■□□□ 1.1
FAM208A-201ENST00000355628 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
FAM208A-201ENST00000355628 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
FAM208A-201ENST00000355628 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
FAM208A-201ENST00000355628 WRNQ14191 1432 aaPredicted RBP eCLIP21.81■■□□□ 1.08
FAM208A-201ENST00000355628 KCNH8Q96L42 1107 aa21.72■■□□□ 1.07
FAM208A-201ENST00000355628 KIF27Q86VH2 1401 aa21.7■■□□□ 1.07
FAM208A-201ENST00000355628 STAG3Q9UJ98 1225 aa21.69■■□□□ 1.06
FAM208A-201ENST00000355628 ZNF326Q5BKZ1 582 aaKnown RBP21.68■■□□□ 1.06
FAM208A-201ENST00000355628 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
FAM208A-201ENST00000355628 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.06
FAM208A-201ENST00000355628 PLEKHD1A6NEE1 506 aa21.63■■□□□ 1.05
FAM208A-201ENST00000355628 TSPY4P0CV99 314 aa21.59■■□□□ 1.05
FAM208A-201ENST00000355628 TSPY10P0CW01 314 aa21.59■■□□□ 1.05
FAM208A-201ENST00000355628 CHGAP10645 457 aaKnown RBP21.58■■□□□ 1.05
FAM208A-201ENST00000355628 MTUS2Q5JR59 1369 aa21.58■■□□□ 1.05
FAM208A-201ENST00000355628 ANP32AP39687 249 aaKnown RBP21.57■■□□□ 1.04
FAM208A-201ENST00000355628 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
FAM208A-201ENST00000355628 EEA1Q15075 1411 aa21.54■■□□□ 1.04
FAM208A-201ENST00000355628 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
FAM208A-201ENST00000355628 CUX2O14529 1486 aa21.5■■□□□ 1.03
FAM208A-201ENST00000355628 ARID4BQ4LE39 1312 aaPredicted RBP21.49■■□□□ 1.03
FAM208A-201ENST00000355628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.48■■□□□ 1.036e-7■■□□□ 12.8
FAM208A-201ENST00000355628 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
FAM208A-201ENST00000355628 SOGA1O94964 1423 aa21.44■■□□□ 1.02
FAM208A-201ENST00000355628 CLIP1P30622 1438 aa21.44■■□□□ 1.02
FAM208A-201ENST00000355628 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
FAM208A-201ENST00000355628 CHIC2Q9UKJ5 165 aa21.43■■□□□ 1.02
FAM208A-201ENST00000355628 FKBP8Q14318 412 aa21.43■■□□□ 1.02
FAM208A-201ENST00000355628 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
FAM208A-201ENST00000355628 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
FAM208A-201ENST00000355628 CANXP27824 592 aaKnown RBP21.39■■□□□ 1.01
FAM208A-201ENST00000355628 CARMIL1Q5VZK9 1371 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms