RNA–Protein interactions for RNA: ENST00000355029.8

NET1-201, Transcript of neuroepithelial cell transforming 1, humanhuman

TSL 1 (best) BASIC

Gene NET1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NET1-201ENST00000355029 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
NET1-201ENST00000355029 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
NET1-201ENST00000355029 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
NET1-201ENST00000355029 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
NET1-201ENST00000355029 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.76
NET1-201ENST00000355029 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
NET1-201ENST00000355029 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
NET1-201ENST00000355029 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
NET1-201ENST00000355029 ABCC9O60706 1549 aa19.26■□□□□ 0.67
NET1-201ENST00000355029 NACADO15069 1562 aa19.19■□□□□ 0.66
NET1-201ENST00000355029 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
NET1-201ENST00000355029 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
NET1-201ENST00000355029 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
NET1-201ENST00000355029 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
NET1-201ENST00000355029 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
NET1-201ENST00000355029 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
NET1-201ENST00000355029 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.56
NET1-201ENST00000355029 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
NET1-201ENST00000355029 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
NET1-201ENST00000355029 HRCP23327 699 aa18.28■□□□□ 0.52
NET1-201ENST00000355029 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
NET1-201ENST00000355029 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.51
NET1-201ENST00000355029 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
NET1-201ENST00000355029 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
NET1-201ENST00000355029 SMARCA4P51532 1647 aa18.08■□□□□ 0.48
NET1-201ENST00000355029 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
NET1-201ENST00000355029 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
NET1-201ENST00000355029 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.47
NET1-201ENST00000355029 RANGAP1P46060 587 aaPredicted RBP18■□□□□ 0.47
NET1-201ENST00000355029 MROH2BQ7Z745 1585 aa17.95■□□□□ 0.46
NET1-201ENST00000355029 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
NET1-201ENST00000355029 WIZO95785 1651 aa17.86■□□□□ 0.45
NET1-201ENST00000355029 EIF4G1Q04637 1599 aaKnown RBP17.84■□□□□ 0.45
NET1-201ENST00000355029 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.43
NET1-201ENST00000355029 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
NET1-201ENST00000355029 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
NET1-201ENST00000355029 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
NET1-201ENST00000355029 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
NET1-201ENST00000355029 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
NET1-201ENST00000355029 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.4
NET1-201ENST00000355029 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
NET1-201ENST00000355029 UBTFP17480 764 aaKnown RBP17.52■□□□□ 0.4
NET1-201ENST00000355029 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
NET1-201ENST00000355029 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
NET1-201ENST00000355029 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
NET1-201ENST00000355029 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
NET1-201ENST00000355029 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
NET1-201ENST00000355029 ABCC8Q09428 1581 aa17.34■□□□□ 0.37
NET1-201ENST00000355029 MYT1Q01538 1121 aa17.25■□□□□ 0.35
NET1-201ENST00000355029 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
NET1-201ENST00000355029 SOGA1O94964 1423 aa17.17■□□□□ 0.34
NET1-201ENST00000355029 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
NET1-201ENST00000355029 CFTRP13569 1480 aa17.16■□□□□ 0.34
NET1-201ENST00000355029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
NET1-201ENST00000355029 RUSC2Q8N2Y8 1516 aa17.13■□□□□ 0.33
NET1-201ENST00000355029 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
NET1-201ENST00000355029 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
NET1-201ENST00000355029 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
NET1-201ENST00000355029 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
NET1-201ENST00000355029 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
NET1-201ENST00000355029 P3H3Q8IVL6 736 aa17.11■□□□□ 0.33
NET1-201ENST00000355029 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
NET1-201ENST00000355029 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
NET1-201ENST00000355029 ARID3CA6NKF2 412 aa16.99■□□□□ 0.31
NET1-201ENST00000355029 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
NET1-201ENST00000355029 ITGAEP38570 1179 aa16.98■□□□□ 0.31
NET1-201ENST00000355029 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
NET1-201ENST00000355029 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
NET1-201ENST00000355029 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
NET1-201ENST00000355029 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
NET1-201ENST00000355029 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
NET1-201ENST00000355029 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
NET1-201ENST00000355029 APLP2Q06481 763 aa16.92■□□□□ 0.3
NET1-201ENST00000355029 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
NET1-201ENST00000355029 FBLN2P98095 1184 aa16.88■□□□□ 0.29
NET1-201ENST00000355029 NESP48681 1621 aa16.86■□□□□ 0.29
NET1-201ENST00000355029 DIEXFQ68CQ4 756 aaKnown RBP16.85■□□□□ 0.29
NET1-201ENST00000355029 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
NET1-201ENST00000355029 CUX1P39880 1505 aa16.84■□□□□ 0.29
NET1-201ENST00000355029 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
NET1-201ENST00000355029 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
NET1-201ENST00000355029 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.27
NET1-201ENST00000355029 WDR62O43379 1518 aa16.74■□□□□ 0.27
NET1-201ENST00000355029 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
NET1-201ENST00000355029 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
NET1-201ENST00000355029 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
NET1-201ENST00000355029 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
NET1-201ENST00000355029 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
NET1-201ENST00000355029 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
NET1-201ENST00000355029 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
NET1-201ENST00000355029 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
NET1-201ENST00000355029 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
NET1-201ENST00000355029 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
NET1-201ENST00000355029 CUX2O14529 1486 aa16.61■□□□□ 0.25
NET1-201ENST00000355029 EEA1Q15075 1411 aa16.6■□□□□ 0.25
NET1-201ENST00000355029 KIF21BO75037 1637 aa16.6■□□□□ 0.25
NET1-201ENST00000355029 MRC2Q9UBG0 1479 aa16.6■□□□□ 0.25
NET1-201ENST00000355029 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
NET1-201ENST00000355029 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
NET1-201ENST00000355029 CLIP1P30622 1438 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms