RNA–Protein interactions for RNA: ENST00000354056.4

CDK2-202, Transcript of cyclin dependent kinase 2, humanhuman

TSL 1 (best) BASIC

Gene CDK2, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-202ENST00000354056 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
CDK2-202ENST00000354056 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
CDK2-202ENST00000354056 ABCC9O60706 1549 aa32.31■■■□□ 2.76
CDK2-202ENST00000354056 RB1CC1Q8TDY2 1594 aa30.93■■■□□ 2.54
CDK2-202ENST00000354056 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
CDK2-202ENST00000354056 NACADO15069 1562 aa30.87■■■□□ 2.53
CDK2-202ENST00000354056 ZCCHC6Q5VYS8 1495 aaKnown RBP30.66■■■□□ 2.5
CDK2-202ENST00000354056 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
CDK2-202ENST00000354056 DCAF1Q9Y4B6 1507 aa30.45■■■□□ 2.47
CDK2-202ENST00000354056 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
CDK2-202ENST00000354056 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
CDK2-202ENST00000354056 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
CDK2-202ENST00000354056 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
CDK2-202ENST00000354056 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
CDK2-202ENST00000354056 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
CDK2-202ENST00000354056 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.27
CDK2-202ENST00000354056 CC2D2AQ9P2K1 1620 aa29.16■■■□□ 2.26
CDK2-202ENST00000354056 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
CDK2-202ENST00000354056 SMARCA4P51532 1647 aa28.59■■■□□ 2.17
CDK2-202ENST00000354056 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
CDK2-202ENST00000354056 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
CDK2-202ENST00000354056 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
CDK2-202ENST00000354056 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
CDK2-202ENST00000354056 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
CDK2-202ENST00000354056 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
CDK2-202ENST00000354056 PEG3Q9GZU2 1588 aa28.31■■■□□ 2.12
CDK2-202ENST00000354056 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
CDK2-202ENST00000354056 RSF1Q96T23 1441 aaPredicted RBP28.06■■■□□ 2.08
CDK2-202ENST00000354056 WIZO95785 1651 aa28.05■■■□□ 2.08
CDK2-202ENST00000354056 NESP48681 1621 aa27.92■■■□□ 2.06
CDK2-202ENST00000354056 ERCC6Q03468 1493 aa27.84■■■□□ 2.05
CDK2-202ENST00000354056 TOP2AP11388 1531 aaKnown RBP27.76■■■□□ 2.03
CDK2-202ENST00000354056 LAMC3Q9Y6N6 1575 aa27.74■■■□□ 2.03
CDK2-202ENST00000354056 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
CDK2-202ENST00000354056 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
CDK2-202ENST00000354056 CUX2O14529 1486 aa27.58■■■□□ 2.01
CDK2-202ENST00000354056 CFTRP13569 1480 aa27.5■■□□□ 1.99
CDK2-202ENST00000354056 CCDC88BA6NC98 1476 aa27.48■■□□□ 1.99
CDK2-202ENST00000354056 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
CDK2-202ENST00000354056 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
CDK2-202ENST00000354056 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
CDK2-202ENST00000354056 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
CDK2-202ENST00000354056 CEP164Q9UPV0 1460 aa27.33■■□□□ 1.97
CDK2-202ENST00000354056 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
CDK2-202ENST00000354056 WDR62O43379 1518 aa27.24■■□□□ 1.95
CDK2-202ENST00000354056 URB2Q14146 1524 aaKnown RBP27.12■■□□□ 1.93
CDK2-202ENST00000354056 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
CDK2-202ENST00000354056 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
CDK2-202ENST00000354056 TOPBP1Q92547 1522 aa26.91■■□□□ 1.9
CDK2-202ENST00000354056 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
CDK2-202ENST00000354056 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
CDK2-202ENST00000354056 IFT140Q96RY7 1462 aa26.79■■□□□ 1.88
CDK2-202ENST00000354056 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
CDK2-202ENST00000354056 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
CDK2-202ENST00000354056 CUX1P39880 1505 aa26.66■■□□□ 1.86
CDK2-202ENST00000354056 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
CDK2-202ENST00000354056 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
CDK2-202ENST00000354056 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
CDK2-202ENST00000354056 SOGA1O94964 1423 aa26.58■■□□□ 1.85
CDK2-202ENST00000354056 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.841e-19■■■■■ 87.5
CDK2-202ENST00000354056 EIF4G3O43432 1585 aaKnown RBP26.53■■□□□ 1.84
CDK2-202ENST00000354056 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
CDK2-202ENST00000354056 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
CDK2-202ENST00000354056 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
CDK2-202ENST00000354056 SYNJ1O43426 1573 aa26.36■■□□□ 1.81
CDK2-202ENST00000354056 TOP2BQ02880 1626 aa26.35■■□□□ 1.81
CDK2-202ENST00000354056 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
CDK2-202ENST00000354056 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
CDK2-202ENST00000354056 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
CDK2-202ENST00000354056 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
CDK2-202ENST00000354056 SNAPC4Q5SXM2 1469 aa26.28■■□□□ 1.8
CDK2-202ENST00000354056 FBLN2P98095 1184 aa26.27■■□□□ 1.8
CDK2-202ENST00000354056 GAPVD1Q14C86 1478 aa26.26■■□□□ 1.79
CDK2-202ENST00000354056 MAGI1Q96QZ7 1491 aaPredicted RBP26.2■■□□□ 1.78
CDK2-202ENST00000354056 ABCA5Q8WWZ7 1642 aa26.19■■□□□ 1.78
CDK2-202ENST00000354056 CHD1O14646 1710 aa26.17■■□□□ 1.78
CDK2-202ENST00000354056 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
CDK2-202ENST00000354056 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
CDK2-202ENST00000354056 PBRM1Q86U86 1689 aa26.11■■□□□ 1.77
CDK2-202ENST00000354056 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
CDK2-202ENST00000354056 ARHGEF11O15085 1522 aa26■■□□□ 1.75
CDK2-202ENST00000354056 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
CDK2-202ENST00000354056 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
CDK2-202ENST00000354056 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
CDK2-202ENST00000354056 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
CDK2-202ENST00000354056 ADAMTS12P58397 1594 aa25.96■■□□□ 1.75
CDK2-202ENST00000354056 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
CDK2-202ENST00000354056 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
CDK2-202ENST00000354056 GRIN2AQ12879 1464 aa25.93■■□□□ 1.74
CDK2-202ENST00000354056 KIF27Q86VH2 1401 aa25.88■■□□□ 1.73
CDK2-202ENST00000354056 IGF1RP08069 1367 aa25.84■■□□□ 1.73
CDK2-202ENST00000354056 NUP160Q12769 1436 aa25.84■■□□□ 1.73
CDK2-202ENST00000354056 CYB5RLQ6IPT4 315 aa25.83■■□□□ 1.73
CDK2-202ENST00000354056 ARAP1Q96P48 1450 aa25.8■■□□□ 1.72
CDK2-202ENST00000354056 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
CDK2-202ENST00000354056 CARMIL1Q5VZK9 1371 aa25.67■■□□□ 1.7
CDK2-202ENST00000354056 CUL7Q14999 1698 aa25.66■■□□□ 1.7
CDK2-202ENST00000354056 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
CDK2-202ENST00000354056 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
CDK2-202ENST00000354056 JPH4Q96JJ6 628 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms