RNA–Protein interactions for RNA: ENST00000352303.9

PSMD13-201, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5 BASIC

Gene PSMD13, Length 1,427 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-201ENST00000352303 NISCHQ9Y2I1 1504 aa30.08■■■□□ 2.41
PSMD13-201ENST00000352303 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
PSMD13-201ENST00000352303 ABCC9O60706 1549 aa26.53■■□□□ 1.84
PSMD13-201ENST00000352303 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
PSMD13-201ENST00000352303 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
PSMD13-201ENST00000352303 NACADO15069 1562 aa25.2■■□□□ 1.62
PSMD13-201ENST00000352303 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
PSMD13-201ENST00000352303 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
PSMD13-201ENST00000352303 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
PSMD13-201ENST00000352303 UNC13AQ9UPW8 1703 aa24.79■■□□□ 1.56
PSMD13-201ENST00000352303 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
PSMD13-201ENST00000352303 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.53
PSMD13-201ENST00000352303 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
PSMD13-201ENST00000352303 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
PSMD13-201ENST00000352303 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
PSMD13-201ENST00000352303 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.42
PSMD13-201ENST00000352303 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
PSMD13-201ENST00000352303 CECR2Q9BXF3 1484 aa23.8■■□□□ 1.4
PSMD13-201ENST00000352303 SMARCA4P51532 1647 aa23.38■■□□□ 1.33
PSMD13-201ENST00000352303 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
PSMD13-201ENST00000352303 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
PSMD13-201ENST00000352303 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
PSMD13-201ENST00000352303 MROH2BQ7Z745 1585 aa23.24■■□□□ 1.31
PSMD13-201ENST00000352303 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
PSMD13-201ENST00000352303 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
PSMD13-201ENST00000352303 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
PSMD13-201ENST00000352303 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.28
PSMD13-201ENST00000352303 WIZO95785 1651 aa23■■□□□ 1.27
PSMD13-201ENST00000352303 NESP48681 1621 aa22.91■■□□□ 1.26
PSMD13-201ENST00000352303 RSF1Q96T23 1441 aaPredicted RBP22.9■■□□□ 1.26
PSMD13-201ENST00000352303 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
PSMD13-201ENST00000352303 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
PSMD13-201ENST00000352303 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
PSMD13-201ENST00000352303 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
PSMD13-201ENST00000352303 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.21
PSMD13-201ENST00000352303 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
PSMD13-201ENST00000352303 CUX2O14529 1486 aa22.55■■□□□ 1.2
PSMD13-201ENST00000352303 THOC2Q8NI27 1593 aaKnown RBP22.49■■□□□ 1.19
PSMD13-201ENST00000352303 CCDC88BA6NC98 1476 aa22.46■■□□□ 1.19
PSMD13-201ENST00000352303 CFTRP13569 1480 aa22.44■■□□□ 1.18
PSMD13-201ENST00000352303 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
PSMD13-201ENST00000352303 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
PSMD13-201ENST00000352303 MRC2Q9UBG0 1479 aa22.36■■□□□ 1.17
PSMD13-201ENST00000352303 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
PSMD13-201ENST00000352303 WDR62O43379 1518 aa22.26■■□□□ 1.15
PSMD13-201ENST00000352303 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
PSMD13-201ENST00000352303 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
PSMD13-201ENST00000352303 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
PSMD13-201ENST00000352303 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
PSMD13-201ENST00000352303 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
PSMD13-201ENST00000352303 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
PSMD13-201ENST00000352303 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
PSMD13-201ENST00000352303 IFT140Q96RY7 1462 aa21.88■■□□□ 1.09
PSMD13-201ENST00000352303 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
PSMD13-201ENST00000352303 CUX1P39880 1505 aa21.8■■□□□ 1.08
PSMD13-201ENST00000352303 RAD54L2Q9Y4B4 1467 aa21.79■■□□□ 1.08
PSMD13-201ENST00000352303 TARBP1Q13395 1621 aaKnown RBP21.76■■□□□ 1.07
PSMD13-201ENST00000352303 SOGA1O94964 1423 aa21.75■■□□□ 1.07
PSMD13-201ENST00000352303 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.072e-6■■■■□ 24.1
PSMD13-201ENST00000352303 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
PSMD13-201ENST00000352303 EIF4G3O43432 1585 aaKnown RBP21.74■■□□□ 1.07
PSMD13-201ENST00000352303 TDRD9Q8NDG6 1382 aaKnown RBP21.7■■□□□ 1.07
PSMD13-201ENST00000352303 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
PSMD13-201ENST00000352303 FBLN2P98095 1184 aa21.61■■□□□ 1.05
PSMD13-201ENST00000352303 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
PSMD13-201ENST00000352303 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
PSMD13-201ENST00000352303 CHD1O14646 1710 aa21.52■■□□□ 1.04
PSMD13-201ENST00000352303 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
PSMD13-201ENST00000352303 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
PSMD13-201ENST00000352303 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
PSMD13-201ENST00000352303 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
PSMD13-201ENST00000352303 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
PSMD13-201ENST00000352303 ABCA10Q8WWZ4 1543 aa21.48■■□□□ 1.03
PSMD13-201ENST00000352303 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
PSMD13-201ENST00000352303 GAPVD1Q14C86 1478 aa21.47■■□□□ 1.03
PSMD13-201ENST00000352303 CHMP7Q8WUX9 453 aaPredicted RBP21.45■■□□□ 1.02
PSMD13-201ENST00000352303 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
PSMD13-201ENST00000352303 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
PSMD13-201ENST00000352303 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
PSMD13-201ENST00000352303 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
PSMD13-201ENST00000352303 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
PSMD13-201ENST00000352303 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
PSMD13-201ENST00000352303 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
PSMD13-201ENST00000352303 ARHGEF11O15085 1522 aa21.31■■□□□ 1
PSMD13-201ENST00000352303 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
PSMD13-201ENST00000352303 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
PSMD13-201ENST00000352303 CLASP1Q7Z460 1538 aa21.22■□□□□ 0.99
PSMD13-201ENST00000352303 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
PSMD13-201ENST00000352303 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
PSMD13-201ENST00000352303 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
PSMD13-201ENST00000352303 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
PSMD13-201ENST00000352303 CEP170Q5SW79 1584 aa21.13■□□□□ 0.97
PSMD13-201ENST00000352303 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
PSMD13-201ENST00000352303 IGF1RP08069 1367 aa21.1■□□□□ 0.97
PSMD13-201ENST00000352303 NUP160Q12769 1436 aa21.08■□□□□ 0.96
PSMD13-201ENST00000352303 ERCC6L2Q5T890 1561 aa21.03■□□□□ 0.96
PSMD13-201ENST00000352303 RUSC2Q8N2Y8 1516 aa21■□□□□ 0.95
PSMD13-201ENST00000352303 CUL7Q14999 1698 aa20.98■□□□□ 0.95
PSMD13-201ENST00000352303 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
PSMD13-201ENST00000352303 JPH4Q96JJ6 628 aa20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms