RNA–Protein interactions for RNA: ENST00000345096.8

TBC1D28-201, Transcript of TBC1 domain family member 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TBC1D28, Length 2,789 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28-201ENST00000345096 NISCHQ9Y2I1 1504 aa33.63■■■□□ 2.97
TBC1D28-201ENST00000345096 SHROOM4Q9ULL8 1493 aa29.58■■■□□ 2.33
TBC1D28-201ENST00000345096 SUPT5HO00267 1087 aaKnown RBP29.21■■■□□ 2.27
TBC1D28-201ENST00000345096 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
TBC1D28-201ENST00000345096 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
TBC1D28-201ENST00000345096 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
TBC1D28-201ENST00000345096 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
TBC1D28-201ENST00000345096 HRCP23327 699 aa28.18■■■□□ 2.1
TBC1D28-201ENST00000345096 PCGF6Q9BYE7 350 aa28.13■■■□□ 2.09
TBC1D28-201ENST00000345096 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
TBC1D28-201ENST00000345096 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
TBC1D28-201ENST00000345096 LOC105371045A0A1W2PR82 267 aa27.78■■■□□ 2.04
TBC1D28-201ENST00000345096 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
TBC1D28-201ENST00000345096 TRIM26Q12899 539 aaPredicted RBP27.23■■□□□ 1.95
TBC1D28-201ENST00000345096 FAM9AQ8IZU1 332 aaPredicted RBP27.07■■□□□ 1.92
TBC1D28-201ENST00000345096 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
TBC1D28-201ENST00000345096 TRIM41Q8WV44 630 aa26.99■■□□□ 1.91
TBC1D28-201ENST00000345096 ABCC9O60706 1549 aa26.92■■□□□ 1.9
TBC1D28-201ENST00000345096 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
TBC1D28-201ENST00000345096 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
TBC1D28-201ENST00000345096 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
TBC1D28-201ENST00000345096 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
TBC1D28-201ENST00000345096 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
TBC1D28-201ENST00000345096 PELP1Q8IZL8 1130 aaKnown RBP26.37■■□□□ 1.81
TBC1D28-201ENST00000345096 SCAF1Q9H7N4 1312 aaKnown RBP26.37■■□□□ 1.81
TBC1D28-201ENST00000345096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
TBC1D28-201ENST00000345096 MROH2BQ7Z745 1585 aa26.3■■□□□ 1.8
TBC1D28-201ENST00000345096 TTBK1Q5TCY1 1321 aaPredicted RBP26.25■■□□□ 1.79
TBC1D28-201ENST00000345096 CCER1Q8TC90 406 aaPredicted RBP26.19■■□□□ 1.78
TBC1D28-201ENST00000345096 WIZO95785 1651 aa26.19■■□□□ 1.78
TBC1D28-201ENST00000345096 NACADO15069 1562 aa26.01■■□□□ 1.75
TBC1D28-201ENST00000345096 NEUROD1Q13562 356 aa25.92■■□□□ 1.74
TBC1D28-201ENST00000345096 ACIN1Q9UKV3 1341 aaKnown RBP25.87■■□□□ 1.73
TBC1D28-201ENST00000345096 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
TBC1D28-201ENST00000345096 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
TBC1D28-201ENST00000345096 BAZ1AQ9NRL2 1556 aaPredicted RBP25.85■■□□□ 1.73
TBC1D28-201ENST00000345096 CCDC88BA6NC98 1476 aa25.83■■□□□ 1.73
TBC1D28-201ENST00000345096 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
TBC1D28-201ENST00000345096 SOGA1O94964 1423 aa25.74■■□□□ 1.71
TBC1D28-201ENST00000345096 CEP162Q5TB80 1403 aa25.73■■□□□ 1.71
TBC1D28-201ENST00000345096 UBTFP17480 764 aaKnown RBP25.73■■□□□ 1.71
TBC1D28-201ENST00000345096 GTF3C3Q9Y5Q9 886 aa25.72■■□□□ 1.71
TBC1D28-201ENST00000345096 RUSC2Q8N2Y8 1516 aa25.62■■□□□ 1.69
TBC1D28-201ENST00000345096 CENPBP07199 599 aaPredicted RBP25.62■■□□□ 1.69
TBC1D28-201ENST00000345096 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
TBC1D28-201ENST00000345096 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
TBC1D28-201ENST00000345096 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
TBC1D28-201ENST00000345096 TNIKQ9UKE5 1360 aa25.55■■□□□ 1.68
TBC1D28-201ENST00000345096 SMARCA2P51531 1590 aa25.54■■□□□ 1.68
TBC1D28-201ENST00000345096 YTHDC1Q96MU7 727 aaKnown RBP25.54■■□□□ 1.68
TBC1D28-201ENST00000345096 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
TBC1D28-201ENST00000345096 HNRNPUL2Q1KMD3 747 aaKnown RBP25.5■■□□□ 1.67
TBC1D28-201ENST00000345096 ZNF316A6NFI3 1004 aaPredicted RBP25.48■■□□□ 1.67
TBC1D28-201ENST00000345096 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
TBC1D28-201ENST00000345096 PABPN1Q86U42 306 aaKnown RBP eCLIP25.42■■□□□ 1.66
TBC1D28-201ENST00000345096 GOLGA3Q08378 1498 aa25.33■■□□□ 1.64
TBC1D28-201ENST00000345096 EEA1Q15075 1411 aa25.32■■□□□ 1.64
TBC1D28-201ENST00000345096 MIER1Q8N108 512 aa25.3■■□□□ 1.64
TBC1D28-201ENST00000345096 MYT1Q01538 1121 aa25.27■■□□□ 1.64
TBC1D28-201ENST00000345096 UNC13AQ9UPW8 1703 aa25.24■■□□□ 1.63
TBC1D28-201ENST00000345096 APLP2Q06481 763 aa25.17■■□□□ 1.62
TBC1D28-201ENST00000345096 CLIP1P30622 1438 aa25.17■■□□□ 1.62
TBC1D28-201ENST00000345096 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
TBC1D28-201ENST00000345096 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
TBC1D28-201ENST00000345096 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
TBC1D28-201ENST00000345096 VPS8Q8N3P4 1428 aa25.02■■□□□ 1.6
TBC1D28-201ENST00000345096 KIF21BO75037 1637 aa24.96■■□□□ 1.59
TBC1D28-201ENST00000345096 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
TBC1D28-201ENST00000345096 KANK4Q5T7N3 995 aaPredicted RBP24.83■■□□□ 1.57
TBC1D28-201ENST00000345096 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.56
TBC1D28-201ENST00000345096 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
TBC1D28-201ENST00000345096 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
TBC1D28-201ENST00000345096 DHX57Q6P158 1386 aaKnown RBP24.76■■□□□ 1.55
TBC1D28-201ENST00000345096 ITGAEP38570 1179 aa24.76■■□□□ 1.55
TBC1D28-201ENST00000345096 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
TBC1D28-201ENST00000345096 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
TBC1D28-201ENST00000345096 CLSPNQ9HAW4 1339 aa24.59■■□□□ 1.53
TBC1D28-201ENST00000345096 SUPT16HQ9Y5B9 1047 aaKnown RBP24.59■■□□□ 1.53
TBC1D28-201ENST00000345096 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
TBC1D28-201ENST00000345096 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
TBC1D28-201ENST00000345096 ERICH3Q5RHP9 1530 aa24.47■■□□□ 1.51
TBC1D28-201ENST00000345096 CCNB3Q8WWL7 1395 aa24.46■■□□□ 1.51
TBC1D28-201ENST00000345096 RRBP1Q9P2E9 1410 aaKnown RBP24.45■■□□□ 1.5
TBC1D28-201ENST00000345096 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
TBC1D28-201ENST00000345096 CUX1P39880 1505 aa24.42■■□□□ 1.5
TBC1D28-201ENST00000345096 KIF27Q86VH2 1401 aa24.41■■□□□ 1.5
TBC1D28-201ENST00000345096 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
TBC1D28-201ENST00000345096 RAB3GAP2Q9H2M9 1393 aa24.36■■□□□ 1.49
TBC1D28-201ENST00000345096 BCANQ96GW7 911 aa24.35■■□□□ 1.49
TBC1D28-201ENST00000345096 SIN3AQ96ST3 1273 aa24.33■■□□□ 1.49
TBC1D28-201ENST00000345096 ATP1B4Q9UN42 357 aaPredicted RBP24.32■■□□□ 1.48
TBC1D28-201ENST00000345096 DDX10Q13206 875 aaKnown RBP24.31■■□□□ 1.48
TBC1D28-201ENST00000345096 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
TBC1D28-201ENST00000345096 HIRIP3Q9BW71 556 aaPredicted RBP24.3■■□□□ 1.48
TBC1D28-201ENST00000345096 TSHZ2Q9NRE2 1034 aa24.29■■□□□ 1.48
TBC1D28-201ENST00000345096 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
TBC1D28-201ENST00000345096 CUX2O14529 1486 aa24.26■■□□□ 1.47
TBC1D28-201ENST00000345096 MAPKBP1O60336 1514 aa24.22■■□□□ 1.47
TBC1D28-201ENST00000345096 IGF1RP08069 1367 aa24.18■■□□□ 1.46
TBC1D28-201ENST00000345096 PHLDB1Q86UU1 1377 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms