RNA–Protein interactions for RNA: ENST00000344642.6

LDLRAD2-201, Transcript of low density lipoprotein receptor class A domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LDLRAD2, Length 4,012 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2-201ENST00000344642 NISCHQ9Y2I1 1504 aa25.29■■□□□ 1.64
LDLRAD2-201ENST00000344642 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
LDLRAD2-201ENST00000344642 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
LDLRAD2-201ENST00000344642 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
LDLRAD2-201ENST00000344642 HRCP23327 699 aa23.19■■□□□ 1.3
LDLRAD2-201ENST00000344642 PCGF6Q9BYE7 350 aa23.14■■□□□ 1.3
LDLRAD2-201ENST00000344642 MYO15BQ96JP2 1530 aa22.42■■□□□ 1.18
LDLRAD2-201ENST00000344642 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
LDLRAD2-201ENST00000344642 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
LDLRAD2-201ENST00000344642 PELP1Q8IZL8 1130 aaKnown RBP22.31■■□□□ 1.16
LDLRAD2-201ENST00000344642 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
LDLRAD2-201ENST00000344642 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
LDLRAD2-201ENST00000344642 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
LDLRAD2-201ENST00000344642 TRIM26Q12899 539 aaPredicted RBP21.93■■□□□ 1.1
LDLRAD2-201ENST00000344642 SLC24A1O60721 1099 aa21.75■■□□□ 1.07
LDLRAD2-201ENST00000344642 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
LDLRAD2-201ENST00000344642 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
LDLRAD2-201ENST00000344642 ZEB1P37275 1124 aaPredicted RBP21.63■■□□□ 1.05
LDLRAD2-201ENST00000344642 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
LDLRAD2-201ENST00000344642 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
LDLRAD2-201ENST00000344642 GTF3C3Q9Y5Q9 886 aa21.58■■□□□ 1.05
LDLRAD2-201ENST00000344642 ABCC9O60706 1549 aa21.54■■□□□ 1.04
LDLRAD2-201ENST00000344642 ACIN1Q9UKV3 1341 aaKnown RBP21.5■■□□□ 1.03
LDLRAD2-201ENST00000344642 TTBK1Q5TCY1 1321 aaPredicted RBP21.43■■□□□ 1.02
LDLRAD2-201ENST00000344642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
LDLRAD2-201ENST00000344642 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
LDLRAD2-201ENST00000344642 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
LDLRAD2-201ENST00000344642 MYT1Q01538 1121 aa21.34■■□□□ 1.01
LDLRAD2-201ENST00000344642 CENPBP07199 599 aaPredicted RBP21.33■■□□□ 1
LDLRAD2-201ENST00000344642 DIEXFQ68CQ4 756 aaKnown RBP21.24■□□□□ 0.99
LDLRAD2-201ENST00000344642 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
LDLRAD2-201ENST00000344642 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
LDLRAD2-201ENST00000344642 MIER1Q8N108 512 aa20.71■□□□□ 0.91
LDLRAD2-201ENST00000344642 ZNF316A6NFI3 1004 aaPredicted RBP20.65■□□□□ 0.9
LDLRAD2-201ENST00000344642 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
LDLRAD2-201ENST00000344642 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
LDLRAD2-201ENST00000344642 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
LDLRAD2-201ENST00000344642 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
LDLRAD2-201ENST00000344642 NACADO15069 1562 aa20.53■□□□□ 0.88
LDLRAD2-201ENST00000344642 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
LDLRAD2-201ENST00000344642 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
LDLRAD2-201ENST00000344642 BCANQ96GW7 911 aa20.44■□□□□ 0.86
LDLRAD2-201ENST00000344642 RANGAP1P46060 587 aaPredicted RBP20.35■□□□□ 0.85
LDLRAD2-201ENST00000344642 AEBP2Q6ZN18 517 aaPredicted RBP20.33■□□□□ 0.85
LDLRAD2-201ENST00000344642 SUPT16HQ9Y5B9 1047 aaKnown RBP20.32■□□□□ 0.84
LDLRAD2-201ENST00000344642 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
LDLRAD2-201ENST00000344642 ANP32EQ9BTT0 268 aa20.3■□□□□ 0.84
LDLRAD2-201ENST00000344642 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
LDLRAD2-201ENST00000344642 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
LDLRAD2-201ENST00000344642 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
LDLRAD2-201ENST00000344642 RTN4Q9NQC3 1192 aaKnown RBP20.16■□□□□ 0.82
LDLRAD2-201ENST00000344642 ITGAEP38570 1179 aa20.03■□□□□ 0.8
LDLRAD2-201ENST00000344642 KCNH8Q96L42 1107 aa20.02■□□□□ 0.79
LDLRAD2-201ENST00000344642 FKBP8Q14318 412 aa20.01■□□□□ 0.79
LDLRAD2-201ENST00000344642 CEP162Q5TB80 1403 aa19.99■□□□□ 0.79
LDLRAD2-201ENST00000344642 APLP2Q06481 763 aa19.98■□□□□ 0.79
LDLRAD2-201ENST00000344642 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
LDLRAD2-201ENST00000344642 ERICH6Q7L0X2 663 aa19.85■□□□□ 0.77
LDLRAD2-201ENST00000344642 NEFLP07196 543 aa19.83■□□□□ 0.77
LDLRAD2-201ENST00000344642 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
LDLRAD2-201ENST00000344642 TRIM52Q96A61 297 aa19.8■□□□□ 0.76
LDLRAD2-201ENST00000344642 SOGA1O94964 1423 aa19.79■□□□□ 0.76
LDLRAD2-201ENST00000344642 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
LDLRAD2-201ENST00000344642 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
LDLRAD2-201ENST00000344642 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
LDLRAD2-201ENST00000344642 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
LDLRAD2-201ENST00000344642 PRKCSHP14314 528 aaPredicted RBP19.73■□□□□ 0.75
LDLRAD2-201ENST00000344642 IRX6P78412 446 aaPredicted RBP19.72■□□□□ 0.75
LDLRAD2-201ENST00000344642 DDX10Q13206 875 aaKnown RBP19.71■□□□□ 0.75
LDLRAD2-201ENST00000344642 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
LDLRAD2-201ENST00000344642 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
LDLRAD2-201ENST00000344642 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
LDLRAD2-201ENST00000344642 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
LDLRAD2-201ENST00000344642 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
LDLRAD2-201ENST00000344642 MSH5O43196 834 aa19.6■□□□□ 0.73
LDLRAD2-201ENST00000344642 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
LDLRAD2-201ENST00000344642 BAZ1AQ9NRL2 1556 aaPredicted RBP19.59■□□□□ 0.73
LDLRAD2-201ENST00000344642 WIZO95785 1651 aa19.58■□□□□ 0.72
LDLRAD2-201ENST00000344642 NBR1Q14596 966 aa19.52■□□□□ 0.71
LDLRAD2-201ENST00000344642 CLIP1P30622 1438 aa19.48■□□□□ 0.71
LDLRAD2-201ENST00000344642 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
LDLRAD2-201ENST00000344642 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
LDLRAD2-201ENST00000344642 DEKP35659 375 aaKnown RBP19.41■□□□□ 0.7
LDLRAD2-201ENST00000344642 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
LDLRAD2-201ENST00000344642 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
LDLRAD2-201ENST00000344642 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.7
LDLRAD2-201ENST00000344642 KCNA4P22459 653 aa19.39■□□□□ 0.69
LDLRAD2-201ENST00000344642 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
LDLRAD2-201ENST00000344642 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
LDLRAD2-201ENST00000344642 ANP32CO43423 234 aa19.36■□□□□ 0.69
LDLRAD2-201ENST00000344642 ANO8Q9HCE9 1232 aaPredicted RBP19.35■□□□□ 0.69
LDLRAD2-201ENST00000344642 HNRNPUQ00839 825 aaKnown RBP eCLIP19.35■□□□□ 0.69
LDLRAD2-201ENST00000344642 CNGB1Q14028 1251 aaPredicted RBP19.34■□□□□ 0.69
LDLRAD2-201ENST00000344642 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
LDLRAD2-201ENST00000344642 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
LDLRAD2-201ENST00000344642 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
LDLRAD2-201ENST00000344642 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
LDLRAD2-201ENST00000344642 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.68
LDLRAD2-201ENST00000344642 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
LDLRAD2-201ENST00000344642 SENP3-EIF4A1A0A087X0R7 540 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms