RNA–Protein interactions for RNA: ENST00000342624.9

TMTC4-202, Transcript of transmembrane and tetratricopeptide repeat containing 4, humanhuman

TSL 2 BASIC

Gene TMTC4, Length 3,602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC4-202ENST00000342624 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.71
TMTC4-202ENST00000342624 SHROOM4Q9ULL8 1493 aa17.21■□□□□ 0.35
TMTC4-202ENST00000342624 SUPT5HO00267 1087 aaKnown RBP16.96■□□□□ 0.31
TMTC4-202ENST00000342624 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
TMTC4-202ENST00000342624 HRCP23327 699 aa16.75■□□□□ 0.27
TMTC4-202ENST00000342624 CCDC180Q9P1Z9 1646 aa16.65■□□□□ 0.26
TMTC4-202ENST00000342624 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
TMTC4-202ENST00000342624 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
TMTC4-202ENST00000342624 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
TMTC4-202ENST00000342624 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
TMTC4-202ENST00000342624 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
TMTC4-202ENST00000342624 DCAF8L2P0C7V8 631 aa16.22■□□□□ 0.19
TMTC4-202ENST00000342624 DCAF1Q9Y4B6 1507 aa16.18■□□□□ 0.18
TMTC4-202ENST00000342624 TRIM26Q12899 539 aaPredicted RBP15.97■□□□□ 0.15
TMTC4-202ENST00000342624 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
TMTC4-202ENST00000342624 ABCC9O60706 1549 aa15.74■□□□□ 0.11
TMTC4-202ENST00000342624 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
TMTC4-202ENST00000342624 FAM9AQ8IZU1 332 aaPredicted RBP15.72■□□□□ 0.11
TMTC4-202ENST00000342624 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
TMTC4-202ENST00000342624 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
TMTC4-202ENST00000342624 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
TMTC4-202ENST00000342624 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
TMTC4-202ENST00000342624 SCRIBQ14160 1630 aa15.58■□□□□ 0.08
TMTC4-202ENST00000342624 PELP1Q8IZL8 1130 aaKnown RBP15.47■□□□□ 0.07
TMTC4-202ENST00000342624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
TMTC4-202ENST00000342624 NEUROD1Q13562 356 aa15.46■□□□□ 0.07
TMTC4-202ENST00000342624 NACADO15069 1562 aa15.42■□□□□ 0.06
TMTC4-202ENST00000342624 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
TMTC4-202ENST00000342624 ACIN1Q9UKV3 1341 aaKnown RBP15.37■□□□□ 0.05
TMTC4-202ENST00000342624 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
TMTC4-202ENST00000342624 WIZO95785 1651 aa15.29■□□□□ 0.04
TMTC4-202ENST00000342624 TTBK1Q5TCY1 1321 aaPredicted RBP15.28■□□□□ 0.04
TMTC4-202ENST00000342624 CCER1Q8TC90 406 aaPredicted RBP15.28■□□□□ 0.04
TMTC4-202ENST00000342624 GTF3C3Q9Y5Q9 886 aa15.28■□□□□ 0.04
TMTC4-202ENST00000342624 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
TMTC4-202ENST00000342624 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
TMTC4-202ENST00000342624 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
TMTC4-202ENST00000342624 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
TMTC4-202ENST00000342624 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
TMTC4-202ENST00000342624 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
TMTC4-202ENST00000342624 SOGA1O94964 1423 aa15.05■□□□□ -0
TMTC4-202ENST00000342624 CEP162Q5TB80 1403 aa15.05■□□□□ -0
TMTC4-202ENST00000342624 WRNQ14191 1432 aaPredicted RBP eCLIP15.04■□□□□ -0
TMTC4-202ENST00000342624 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
TMTC4-202ENST00000342624 YTHDC1Q96MU7 727 aaKnown RBP15.03■□□□□ -0
TMTC4-202ENST00000342624 CENPBP07199 599 aaPredicted RBP15□□□□□ -0.01
TMTC4-202ENST00000342624 MIER1Q8N108 512 aa14.96□□□□□ -0.01
TMTC4-202ENST00000342624 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
TMTC4-202ENST00000342624 SMARCA2P51531 1590 aa14.89□□□□□ -0.03
TMTC4-202ENST00000342624 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
TMTC4-202ENST00000342624 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
TMTC4-202ENST00000342624 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
TMTC4-202ENST00000342624 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
TMTC4-202ENST00000342624 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
TMTC4-202ENST00000342624 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
TMTC4-202ENST00000342624 SMARCA4P51532 1647 aa14.79□□□□□ -0.04
TMTC4-202ENST00000342624 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
TMTC4-202ENST00000342624 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
TMTC4-202ENST00000342624 CLIP1P30622 1438 aa14.67□□□□□ -0.06
TMTC4-202ENST00000342624 MYT1Q01538 1121 aa14.66□□□□□ -0.06
TMTC4-202ENST00000342624 EEA1Q15075 1411 aa14.66□□□□□ -0.06
TMTC4-202ENST00000342624 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
TMTC4-202ENST00000342624 RAPGEF2Q9Y4G8 1499 aa14.62□□□□□ -0.07
TMTC4-202ENST00000342624 SUPT16HQ9Y5B9 1047 aaKnown RBP14.61□□□□□ -0.07
TMTC4-202ENST00000342624 VPS8Q8N3P4 1428 aa14.6□□□□□ -0.07
TMTC4-202ENST00000342624 KIF21BO75037 1637 aa14.6□□□□□ -0.07
TMTC4-202ENST00000342624 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
TMTC4-202ENST00000342624 DHX57Q6P158 1386 aaKnown RBP14.56□□□□□ -0.08
TMTC4-202ENST00000342624 KCNH8Q96L42 1107 aa14.56□□□□□ -0.08
TMTC4-202ENST00000342624 KANK4Q5T7N3 995 aaPredicted RBP14.51□□□□□ -0.09
TMTC4-202ENST00000342624 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
TMTC4-202ENST00000342624 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
TMTC4-202ENST00000342624 TSHZ2Q9NRE2 1034 aa14.5□□□□□ -0.09
TMTC4-202ENST00000342624 ARAP1Q96P48 1450 aa14.45□□□□□ -0.1
TMTC4-202ENST00000342624 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
TMTC4-202ENST00000342624 APLP2Q06481 763 aa14.39□□□□□ -0.11
TMTC4-202ENST00000342624 BCANQ96GW7 911 aa14.36□□□□□ -0.11
TMTC4-202ENST00000342624 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
TMTC4-202ENST00000342624 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
TMTC4-202ENST00000342624 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.12
TMTC4-202ENST00000342624 MAPKBP1O60336 1514 aa14.33□□□□□ -0.12
TMTC4-202ENST00000342624 ITGAEP38570 1179 aa14.32□□□□□ -0.12
TMTC4-202ENST00000342624 PRXQ9BXM0 1461 aa14.32□□□□□ -0.12
TMTC4-202ENST00000342624 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
TMTC4-202ENST00000342624 ANP32EQ9BTT0 268 aa14.3□□□□□ -0.12
TMTC4-202ENST00000342624 CUX2O14529 1486 aa14.3□□□□□ -0.12
TMTC4-202ENST00000342624 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
TMTC4-202ENST00000342624 WDR97A6NE52 1622 aa14.25□□□□□ -0.13
TMTC4-202ENST00000342624 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
TMTC4-202ENST00000342624 RAB3GAP2Q9H2M9 1393 aa14.25□□□□□ -0.13
TMTC4-202ENST00000342624 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
TMTC4-202ENST00000342624 CCNB3Q8WWL7 1395 aa14.24□□□□□ -0.13
TMTC4-202ENST00000342624 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
TMTC4-202ENST00000342624 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
TMTC4-202ENST00000342624 FKBP8Q14318 412 aa14.23□□□□□ -0.13
TMTC4-202ENST00000342624 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
TMTC4-202ENST00000342624 DDX10Q13206 875 aaKnown RBP14.21□□□□□ -0.13
TMTC4-202ENST00000342624 CUX1P39880 1505 aa14.21□□□□□ -0.14
TMTC4-202ENST00000342624 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
TMTC4-202ENST00000342624 BCL11AQ9H165 835 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms