RNA–Protein interactions for RNA: ENST00000342260.9

NHSL1-201, Transcript of NHS like 1, humanhuman

APPRIS ALT2 TSL 5

Gene NHSL1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHSL1-201ENST00000342260 NISCHQ9Y2I1 1504 aa28.15■■■□□ 2.1
NHSL1-201ENST00000342260 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
NHSL1-201ENST00000342260 ABCC9O60706 1549 aa24.78■■□□□ 1.56
NHSL1-201ENST00000342260 RB1CC1Q8TDY2 1594 aa23.72■■□□□ 1.39
NHSL1-201ENST00000342260 NACADO15069 1562 aa23.67■■□□□ 1.38
NHSL1-201ENST00000342260 DCAF8L2P0C7V8 631 aa23.64■■□□□ 1.37
NHSL1-201ENST00000342260 MYO15BQ96JP2 1530 aa23.5■■□□□ 1.35
NHSL1-201ENST00000342260 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
NHSL1-201ENST00000342260 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
NHSL1-201ENST00000342260 PABPN1Q86U42 306 aaKnown RBP eCLIP23.18■■□□□ 1.3
NHSL1-201ENST00000342260 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
NHSL1-201ENST00000342260 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
NHSL1-201ENST00000342260 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
NHSL1-201ENST00000342260 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
NHSL1-201ENST00000342260 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
NHSL1-201ENST00000342260 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
NHSL1-201ENST00000342260 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
NHSL1-201ENST00000342260 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
NHSL1-201ENST00000342260 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
NHSL1-201ENST00000342260 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
NHSL1-201ENST00000342260 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
NHSL1-201ENST00000342260 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
NHSL1-201ENST00000342260 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
NHSL1-201ENST00000342260 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
NHSL1-201ENST00000342260 MROH2BQ7Z745 1585 aa21.68■■□□□ 1.06
NHSL1-201ENST00000342260 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
NHSL1-201ENST00000342260 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
NHSL1-201ENST00000342260 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.02
NHSL1-201ENST00000342260 NESP48681 1621 aa21.38■■□□□ 1.01
NHSL1-201ENST00000342260 WIZO95785 1651 aa21.37■■□□□ 1.01
NHSL1-201ENST00000342260 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
NHSL1-201ENST00000342260 LAMC3Q9Y6N6 1575 aa21.28■■□□□ 1
NHSL1-201ENST00000342260 CUX2O14529 1486 aa21.26■□□□□ 0.99
NHSL1-201ENST00000342260 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
NHSL1-201ENST00000342260 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
NHSL1-201ENST00000342260 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
NHSL1-201ENST00000342260 CFTRP13569 1480 aa21.06■□□□□ 0.96
NHSL1-201ENST00000342260 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
NHSL1-201ENST00000342260 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.95
NHSL1-201ENST00000342260 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
NHSL1-201ENST00000342260 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
NHSL1-201ENST00000342260 FANCD2Q9BXW9 1451 aa20.95■□□□□ 0.94
NHSL1-201ENST00000342260 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
NHSL1-201ENST00000342260 CEP164Q9UPV0 1460 aa20.92■□□□□ 0.94
NHSL1-201ENST00000342260 WDR62O43379 1518 aa20.88■□□□□ 0.93
NHSL1-201ENST00000342260 URB2Q14146 1524 aaKnown RBP20.76■□□□□ 0.91
NHSL1-201ENST00000342260 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
NHSL1-201ENST00000342260 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
NHSL1-201ENST00000342260 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
NHSL1-201ENST00000342260 TOPBP1Q92547 1522 aa20.58■□□□□ 0.89
NHSL1-201ENST00000342260 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
NHSL1-201ENST00000342260 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
NHSL1-201ENST00000342260 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
NHSL1-201ENST00000342260 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
NHSL1-201ENST00000342260 POLA1P09884 1462 aaPredicted RBP20.4■□□□□ 0.86
NHSL1-201ENST00000342260 SOGA1O94964 1423 aa20.36■□□□□ 0.85
NHSL1-201ENST00000342260 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
NHSL1-201ENST00000342260 CUX1P39880 1505 aa20.33■□□□□ 0.85
NHSL1-201ENST00000342260 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.841e-5■□□□□ 8.1
NHSL1-201ENST00000342260 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
NHSL1-201ENST00000342260 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
NHSL1-201ENST00000342260 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
NHSL1-201ENST00000342260 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
NHSL1-201ENST00000342260 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
NHSL1-201ENST00000342260 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
NHSL1-201ENST00000342260 FBLN2P98095 1184 aa20.13■□□□□ 0.81
NHSL1-201ENST00000342260 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
NHSL1-201ENST00000342260 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
NHSL1-201ENST00000342260 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
NHSL1-201ENST00000342260 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.81
NHSL1-201ENST00000342260 SNAPC4Q5SXM2 1469 aa20.08■□□□□ 0.81
NHSL1-201ENST00000342260 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
NHSL1-201ENST00000342260 TOP2BQ02880 1626 aa20.08■□□□□ 0.8
NHSL1-201ENST00000342260 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
NHSL1-201ENST00000342260 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
NHSL1-201ENST00000342260 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
NHSL1-201ENST00000342260 CHD1O14646 1710 aa20.02■□□□□ 0.8
NHSL1-201ENST00000342260 SYNJ2O15056 1496 aa20.01■□□□□ 0.79
NHSL1-201ENST00000342260 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
NHSL1-201ENST00000342260 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
NHSL1-201ENST00000342260 RIMBP3CA6NJZ7 1639 aa19.97■□□□□ 0.79
NHSL1-201ENST00000342260 RIMBP3BA6NNM3 1639 aa19.97■□□□□ 0.79
NHSL1-201ENST00000342260 RIMBP3Q9UFD9 1639 aa19.97■□□□□ 0.79
NHSL1-201ENST00000342260 PBRM1Q86U86 1689 aa19.92■□□□□ 0.78
NHSL1-201ENST00000342260 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
NHSL1-201ENST00000342260 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
NHSL1-201ENST00000342260 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
NHSL1-201ENST00000342260 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
NHSL1-201ENST00000342260 GRIN2AQ12879 1464 aa19.84■□□□□ 0.77
NHSL1-201ENST00000342260 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
NHSL1-201ENST00000342260 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
NHSL1-201ENST00000342260 NUP160Q12769 1436 aa19.79■□□□□ 0.76
NHSL1-201ENST00000342260 IGF1RP08069 1367 aa19.76■□□□□ 0.75
NHSL1-201ENST00000342260 KIF27Q86VH2 1401 aa19.75■□□□□ 0.75
NHSL1-201ENST00000342260 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
NHSL1-201ENST00000342260 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
NHSL1-201ENST00000342260 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
NHSL1-201ENST00000342260 ERCC6L2Q5T890 1561 aa19.6■□□□□ 0.73
NHSL1-201ENST00000342260 CARMIL1Q5VZK9 1371 aa19.59■□□□□ 0.73
NHSL1-201ENST00000342260 CUL7Q14999 1698 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms