RNA–Protein interactions for RNA: ENST00000342219.8

ISM2-202, Transcript of isthmin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ISM2, Length 2,971 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ISM2-202ENST00000342219 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
ISM2-202ENST00000342219 CCDC180Q9P1Z9 1646 aa22.1■■□□□ 1.13
ISM2-202ENST00000342219 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
ISM2-202ENST00000342219 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
ISM2-202ENST00000342219 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
ISM2-202ENST00000342219 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
ISM2-202ENST00000342219 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
ISM2-202ENST00000342219 ABCC9O60706 1549 aa20.87■□□□□ 0.93
ISM2-202ENST00000342219 MYO15BQ96JP2 1530 aa20.7■□□□□ 0.9
ISM2-202ENST00000342219 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.88
ISM2-202ENST00000342219 NACADO15069 1562 aa20.57■□□□□ 0.88
ISM2-202ENST00000342219 PPARGC1BQ86YN6 1023 aaKnown RBP20.49■□□□□ 0.87
ISM2-202ENST00000342219 HRCP23327 699 aa20.42■□□□□ 0.86
ISM2-202ENST00000342219 SCRIBQ14160 1630 aa20.39■□□□□ 0.86
ISM2-202ENST00000342219 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
ISM2-202ENST00000342219 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
ISM2-202ENST00000342219 PCGF6Q9BYE7 350 aa20.27■□□□□ 0.83
ISM2-202ENST00000342219 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
ISM2-202ENST00000342219 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
ISM2-202ENST00000342219 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
ISM2-202ENST00000342219 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
ISM2-202ENST00000342219 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
ISM2-202ENST00000342219 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
ISM2-202ENST00000342219 BICRAQ9NZM4 1560 aa19.77■□□□□ 0.76
ISM2-202ENST00000342219 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
ISM2-202ENST00000342219 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
ISM2-202ENST00000342219 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
ISM2-202ENST00000342219 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
ISM2-202ENST00000342219 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
ISM2-202ENST00000342219 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
ISM2-202ENST00000342219 WIZO95785 1651 aa19.52■□□□□ 0.72
ISM2-202ENST00000342219 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
ISM2-202ENST00000342219 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
ISM2-202ENST00000342219 TOP2AP11388 1531 aaKnown RBP19.3■□□□□ 0.68
ISM2-202ENST00000342219 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
ISM2-202ENST00000342219 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
ISM2-202ENST00000342219 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
ISM2-202ENST00000342219 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
ISM2-202ENST00000342219 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
ISM2-202ENST00000342219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
ISM2-202ENST00000342219 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
ISM2-202ENST00000342219 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
ISM2-202ENST00000342219 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
ISM2-202ENST00000342219 RANGAP1P46060 587 aaPredicted RBP19.03■□□□□ 0.64
ISM2-202ENST00000342219 GTF3C3Q9Y5Q9 886 aa19■□□□□ 0.63
ISM2-202ENST00000342219 NCAPD3P42695 1498 aa18.99■□□□□ 0.63
ISM2-202ENST00000342219 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
ISM2-202ENST00000342219 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
ISM2-202ENST00000342219 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
ISM2-202ENST00000342219 SOGA1O94964 1423 aa18.92■□□□□ 0.62
ISM2-202ENST00000342219 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
ISM2-202ENST00000342219 CC2D2AQ9P2K1 1620 aa18.87■□□□□ 0.61
ISM2-202ENST00000342219 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
ISM2-202ENST00000342219 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
ISM2-202ENST00000342219 MYT1Q01538 1121 aa18.81■□□□□ 0.6
ISM2-202ENST00000342219 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
ISM2-202ENST00000342219 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
ISM2-202ENST00000342219 CEP162Q5TB80 1403 aa18.71■□□□□ 0.58
ISM2-202ENST00000342219 HNRNPUL2Q1KMD3 747 aaKnown RBP18.67■□□□□ 0.58
ISM2-202ENST00000342219 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
ISM2-202ENST00000342219 CENPBP07199 599 aaPredicted RBP18.61■□□□□ 0.57
ISM2-202ENST00000342219 CFTRP13569 1480 aa18.6■□□□□ 0.57
ISM2-202ENST00000342219 DIEXFQ68CQ4 756 aaKnown RBP18.6■□□□□ 0.57
ISM2-202ENST00000342219 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
ISM2-202ENST00000342219 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
ISM2-202ENST00000342219 TNIKQ9UKE5 1360 aa18.51■□□□□ 0.55
ISM2-202ENST00000342219 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
ISM2-202ENST00000342219 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
ISM2-202ENST00000342219 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
ISM2-202ENST00000342219 APLP2Q06481 763 aa18.4■□□□□ 0.54
ISM2-202ENST00000342219 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
ISM2-202ENST00000342219 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
ISM2-202ENST00000342219 EEA1Q15075 1411 aa18.39■□□□□ 0.53
ISM2-202ENST00000342219 CUX1P39880 1505 aa18.39■□□□□ 0.53
ISM2-202ENST00000342219 CLIP1P30622 1438 aa18.36■□□□□ 0.53
ISM2-202ENST00000342219 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
ISM2-202ENST00000342219 NESP48681 1621 aa18.36■□□□□ 0.53
ISM2-202ENST00000342219 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.52
ISM2-202ENST00000342219 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.52
ISM2-202ENST00000342219 ITGAEP38570 1179 aa18.32■□□□□ 0.52
ISM2-202ENST00000342219 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
ISM2-202ENST00000342219 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
ISM2-202ENST00000342219 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
ISM2-202ENST00000342219 ZNF316A6NFI3 1004 aaPredicted RBP18.19■□□□□ 0.5
ISM2-202ENST00000342219 BCL11AQ9H165 835 aa18.19■□□□□ 0.5
ISM2-202ENST00000342219 MIER1Q8N108 512 aa18.18■□□□□ 0.5
ISM2-202ENST00000342219 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
ISM2-202ENST00000342219 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
ISM2-202ENST00000342219 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
ISM2-202ENST00000342219 KIF21BO75037 1637 aa18.15■□□□□ 0.5
ISM2-202ENST00000342219 P3H3Q8IVL6 736 aa18.15■□□□□ 0.5
ISM2-202ENST00000342219 VPS8Q8N3P4 1428 aa18.15■□□□□ 0.5
ISM2-202ENST00000342219 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
ISM2-202ENST00000342219 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
ISM2-202ENST00000342219 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
ISM2-202ENST00000342219 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
ISM2-202ENST00000342219 CUX2O14529 1486 aa18.08■□□□□ 0.49
ISM2-202ENST00000342219 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
ISM2-202ENST00000342219 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
ISM2-202ENST00000342219 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms