RNA–Protein interactions for RNA: ENST00000340930.7

PTK2-201, Transcript of protein tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene PTK2, Length 4,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-201ENST00000340930 NISCHQ9Y2I1 1504 aa13.36□□□□□ -0.27
PTK2-201ENST00000340930 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
PTK2-201ENST00000340930 SHROOM4Q9ULL8 1493 aa11.54□□□□□ -0.56
PTK2-201ENST00000340930 CCDC180Q9P1Z9 1646 aa11.43□□□□□ -0.58
PTK2-201ENST00000340930 SUPT5HO00267 1087 aaKnown RBP11.35□□□□□ -0.59
PTK2-201ENST00000340930 ABCC9O60706 1549 aa11.25□□□□□ -0.61
PTK2-201ENST00000340930 ZCCHC6Q5VYS8 1495 aaKnown RBP11.15□□□□□ -0.62
PTK2-201ENST00000340930 DCAF1Q9Y4B6 1507 aa10.88□□□□□ -0.67
PTK2-201ENST00000340930 NACADO15069 1562 aa10.85□□□□□ -0.67
PTK2-201ENST00000340930 RB1CC1Q8TDY2 1594 aa10.84□□□□□ -0.67
PTK2-201ENST00000340930 SCRIBQ14160 1630 aa10.83□□□□□ -0.68
PTK2-201ENST00000340930 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTK2-201ENST00000340930 MYO15BQ96JP2 1530 aa10.71□□□□□ -0.7
PTK2-201ENST00000340930 TRIM41Q8WV44 630 aa10.65□□□□□ -0.71
PTK2-201ENST00000340930 FAM9AQ8IZU1 332 aaPredicted RBP10.56□□□□□ -0.72
PTK2-201ENST00000340930 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
PTK2-201ENST00000340930 CHIC1Q5VXU3 224 aa10.51□□□□□ -0.73
PTK2-201ENST00000340930 RSF1Q96T23 1441 aaPredicted RBP10.46□□□□□ -0.73
PTK2-201ENST00000340930 BAZ1AQ9NRL2 1556 aaPredicted RBP10.43□□□□□ -0.74
PTK2-201ENST00000340930 CECR2Q9BXF3 1484 aa10.39□□□□□ -0.75
PTK2-201ENST00000340930 UBTFP17480 764 aaKnown RBP10.34□□□□□ -0.75
PTK2-201ENST00000340930 APLP2Q06481 763 aa10.33□□□□□ -0.76
PTK2-201ENST00000340930 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
PTK2-201ENST00000340930 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
PTK2-201ENST00000340930 RANGAP1P46060 587 aaPredicted RBP10.24□□□□□ -0.77
PTK2-201ENST00000340930 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
PTK2-201ENST00000340930 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
PTK2-201ENST00000340930 SMARCA4P51532 1647 aa10.21□□□□□ -0.78
PTK2-201ENST00000340930 WIZO95785 1651 aa10.18□□□□□ -0.78
PTK2-201ENST00000340930 TOP2AP11388 1531 aaKnown RBP10.15□□□□□ -0.78
PTK2-201ENST00000340930 ATAD2BQ9ULI0 1458 aa10.13□□□□□ -0.79
PTK2-201ENST00000340930 TTBK1Q5TCY1 1321 aaPredicted RBP10.12□□□□□ -0.79
PTK2-201ENST00000340930 PCGF6Q9BYE7 350 aa10.12□□□□□ -0.79
PTK2-201ENST00000340930 CCDC88BA6NC98 1476 aa10.11□□□□□ -0.79
PTK2-201ENST00000340930 CSRNP3Q8WYN3 585 aa10.11□□□□□ -0.79
PTK2-201ENST00000340930 ATP1B4Q9UN42 357 aaPredicted RBP10.09□□□□□ -0.79
PTK2-201ENST00000340930 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
PTK2-201ENST00000340930 WRNQ14191 1432 aaPredicted RBP eCLIP10.08□□□□□ -0.8
PTK2-201ENST00000340930 UNC13AQ9UPW8 1703 aa10.05□□□□□ -0.8
PTK2-201ENST00000340930 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
PTK2-201ENST00000340930 EEA1Q15075 1411 aa10.01□□□□□ -0.81
PTK2-201ENST00000340930 NCAPD3P42695 1498 aa10.01□□□□□ -0.81
PTK2-201ENST00000340930 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
PTK2-201ENST00000340930 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
PTK2-201ENST00000340930 CADPSQ9ULU8 1353 aa9.95□□□□□ -0.82
PTK2-201ENST00000340930 ABCC8Q09428 1581 aa9.93□□□□□ -0.82
PTK2-201ENST00000340930 KIF27Q86VH2 1401 aa9.92□□□□□ -0.82
PTK2-201ENST00000340930 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
PTK2-201ENST00000340930 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
PTK2-201ENST00000340930 FBLN2P98095 1184 aa9.91□□□□□ -0.82
PTK2-201ENST00000340930 ERCC6Q03468 1493 aa9.9□□□□□ -0.83
PTK2-201ENST00000340930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.89□□□□□ -0.83
PTK2-201ENST00000340930 HNRNPUL2Q1KMD3 747 aaKnown RBP9.89□□□□□ -0.83
PTK2-201ENST00000340930 CC2D2AQ9P2K1 1620 aa9.89□□□□□ -0.83
PTK2-201ENST00000340930 GOLGA3Q08378 1498 aa9.88□□□□□ -0.83
PTK2-201ENST00000340930 CCER1Q8TC90 406 aaPredicted RBP9.87□□□□□ -0.83
PTK2-201ENST00000340930 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
PTK2-201ENST00000340930 PEG3Q9GZU2 1588 aa9.87□□□□□ -0.83
PTK2-201ENST00000340930 CEP164Q9UPV0 1460 aa9.86□□□□□ -0.83
PTK2-201ENST00000340930 SOGA1O94964 1423 aa9.85□□□□□ -0.83
PTK2-201ENST00000340930 CUX2O14529 1486 aa9.83□□□□□ -0.84
PTK2-201ENST00000340930 FANCD2Q9BXW9 1451 aa9.82□□□□□ -0.84
PTK2-201ENST00000340930 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
PTK2-201ENST00000340930 TNIKQ9UKE5 1360 aa9.81□□□□□ -0.84
PTK2-201ENST00000340930 CLIP1P30622 1438 aa9.81□□□□□ -0.84
PTK2-201ENST00000340930 CFTRP13569 1480 aa9.8□□□□□ -0.84
PTK2-201ENST00000340930 CEP162Q5TB80 1403 aa9.79□□□□□ -0.84
PTK2-201ENST00000340930 ITGAEP38570 1179 aa9.78□□□□□ -0.84
PTK2-201ENST00000340930 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
PTK2-201ENST00000340930 CARMIL1Q5VZK9 1371 aa9.76□□□□□ -0.85
PTK2-201ENST00000340930 FAM50AQ14320 339 aaKnown RBP9.71□□□□□ -0.85
PTK2-201ENST00000340930 TDRD9Q8NDG6 1382 aaKnown RBP9.71□□□□□ -0.86
PTK2-201ENST00000340930 CDK11AQ9UQ88 783 aaPredicted RBP9.7□□□□□ -0.86
PTK2-201ENST00000340930 FGD5Q6ZNL6 1462 aa9.7□□□□□ -0.86
PTK2-201ENST00000340930 MYT1Q01538 1121 aa9.69□□□□□ -0.86
PTK2-201ENST00000340930 NESP48681 1621 aa9.69□□□□□ -0.86
PTK2-201ENST00000340930 HRCP23327 699 aa9.68□□□□□ -0.86
PTK2-201ENST00000340930 SYNJ1O43426 1573 aa9.68□□□□□ -0.86
PTK2-201ENST00000340930 RUSC2Q8N2Y8 1516 aa9.67□□□□□ -0.86
PTK2-201ENST00000340930 LAMC3Q9Y6N6 1575 aa9.66□□□□□ -0.86
PTK2-201ENST00000340930 ARID3CA6NKF2 412 aa9.66□□□□□ -0.86
PTK2-201ENST00000340930 TOP2BQ02880 1626 aa9.65□□□□□ -0.86
PTK2-201ENST00000340930 RAPGEF2Q9Y4G8 1499 aa9.65□□□□□ -0.86
PTK2-201ENST00000340930 MYT1LQ9UL68 1186 aa9.63□□□□□ -0.87
PTK2-201ENST00000340930 DNAJC5BQ9UF47 199 aa9.63□□□□□ -0.87
PTK2-201ENST00000340930 CUX1P39880 1505 aa9.62□□□□□ -0.87
PTK2-201ENST00000340930 FHAD1B1AJZ9 1412 aa9.62□□□□□ -0.87
PTK2-201ENST00000340930 MTUS2Q5JR59 1369 aa9.62□□□□□ -0.87
PTK2-201ENST00000340930 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
PTK2-201ENST00000340930 RAD54L2Q9Y4B4 1467 aa9.61□□□□□ -0.87
PTK2-201ENST00000340930 PELP1Q8IZL8 1130 aaKnown RBP9.6□□□□□ -0.87
PTK2-201ENST00000340930 MRC2Q9UBG0 1479 aa9.6□□□□□ -0.87
PTK2-201ENST00000340930 VPS8Q8N3P4 1428 aa9.6□□□□□ -0.87
PTK2-201ENST00000340930 GAPVD1Q14C86 1478 aa9.6□□□□□ -0.87
PTK2-201ENST00000340930 DNMBPQ6XZF7 1577 aa9.6□□□□□ -0.87
PTK2-201ENST00000340930 IGF1RP08069 1367 aa9.59□□□□□ -0.87
PTK2-201ENST00000340930 POLA1P09884 1462 aaPredicted RBP9.57□□□□□ -0.88
PTK2-201ENST00000340930 KIF21BO75037 1637 aa9.55□□□□□ -0.88
PTK2-201ENST00000340930 NPM1P06748 294 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTK2-201ENST00000340930 ERICH3Q5RHP9 1530 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms