RNA–Protein interactions for RNA: ENST00000340394.12

ATXN2L-203, Transcript of ataxin 2 like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2L, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2L-203ENST00000340394 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
ATXN2L-203ENST00000340394 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
ATXN2L-203ENST00000340394 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
ATXN2L-203ENST00000340394 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
ATXN2L-203ENST00000340394 ZCCHC6Q5VYS8 1495 aaKnown RBP21.23■□□□□ 0.99
ATXN2L-203ENST00000340394 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
ATXN2L-203ENST00000340394 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
ATXN2L-203ENST00000340394 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
ATXN2L-203ENST00000340394 PPARGC1BQ86YN6 1023 aaKnown RBP20.69■□□□□ 0.9
ATXN2L-203ENST00000340394 HRCP23327 699 aa20.57■□□□□ 0.88
ATXN2L-203ENST00000340394 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
ATXN2L-203ENST00000340394 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
ATXN2L-203ENST00000340394 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
ATXN2L-203ENST00000340394 ABCC9O60706 1549 aa20.19■□□□□ 0.82
ATXN2L-203ENST00000340394 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
ATXN2L-203ENST00000340394 NACADO15069 1562 aa20.05■□□□□ 0.8
ATXN2L-203ENST00000340394 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
ATXN2L-203ENST00000340394 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
ATXN2L-203ENST00000340394 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
ATXN2L-203ENST00000340394 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
ATXN2L-203ENST00000340394 LOC105371045A0A1W2PR82 267 aa19.74■□□□□ 0.75
ATXN2L-203ENST00000340394 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
ATXN2L-203ENST00000340394 MYT1Q01538 1121 aa19.62■□□□□ 0.73
ATXN2L-203ENST00000340394 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.731e-7■□□□□ 10.1
ATXN2L-203ENST00000340394 CECR2Q9BXF3 1484 aa19.58■□□□□ 0.72
ATXN2L-203ENST00000340394 YTHDC1Q96MU7 727 aaKnown RBP19.56■□□□□ 0.72
ATXN2L-203ENST00000340394 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
ATXN2L-203ENST00000340394 TTBK1Q5TCY1 1321 aaPredicted RBP19.5■□□□□ 0.71
ATXN2L-203ENST00000340394 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
ATXN2L-203ENST00000340394 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
ATXN2L-203ENST00000340394 GTF3C3Q9Y5Q9 886 aa19.46■□□□□ 0.71
ATXN2L-203ENST00000340394 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
ATXN2L-203ENST00000340394 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
ATXN2L-203ENST00000340394 WIZO95785 1651 aa19.38■□□□□ 0.69
ATXN2L-203ENST00000340394 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
ATXN2L-203ENST00000340394 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
ATXN2L-203ENST00000340394 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.68
ATXN2L-203ENST00000340394 NEUROD1Q13562 356 aa19.26■□□□□ 0.67
ATXN2L-203ENST00000340394 SMARCA4P51532 1647 aa19.24■□□□□ 0.67
ATXN2L-203ENST00000340394 ACIN1Q9UKV3 1341 aaKnown RBP19.23■□□□□ 0.67
ATXN2L-203ENST00000340394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.16■□□□□ 0.66
ATXN2L-203ENST00000340394 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
ATXN2L-203ENST00000340394 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
ATXN2L-203ENST00000340394 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
ATXN2L-203ENST00000340394 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.65
ATXN2L-203ENST00000340394 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
ATXN2L-203ENST00000340394 SMARCA2P51531 1590 aa18.99■□□□□ 0.63
ATXN2L-203ENST00000340394 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
ATXN2L-203ENST00000340394 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.61
ATXN2L-203ENST00000340394 ABCC8Q09428 1581 aa18.83■□□□□ 0.6
ATXN2L-203ENST00000340394 ATAD2BQ9ULI0 1458 aa18.81■□□□□ 0.6
ATXN2L-203ENST00000340394 BAZ1BQ9UIG0 1483 aaKnown RBP18.78■□□□□ 0.6
ATXN2L-203ENST00000340394 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
ATXN2L-203ENST00000340394 BCANQ96GW7 911 aa18.64■□□□□ 0.57
ATXN2L-203ENST00000340394 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
ATXN2L-203ENST00000340394 EEA1Q15075 1411 aa18.59■□□□□ 0.57
ATXN2L-203ENST00000340394 SOGA1O94964 1423 aa18.59■□□□□ 0.57
ATXN2L-203ENST00000340394 ERICH6Q7L0X2 663 aa18.55■□□□□ 0.56
ATXN2L-203ENST00000340394 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
ATXN2L-203ENST00000340394 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
ATXN2L-203ENST00000340394 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
ATXN2L-203ENST00000340394 NCAPD3P42695 1498 aa18.52■□□□□ 0.55
ATXN2L-203ENST00000340394 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
ATXN2L-203ENST00000340394 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
ATXN2L-203ENST00000340394 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
ATXN2L-203ENST00000340394 MIER1Q8N108 512 aa18.44■□□□□ 0.54
ATXN2L-203ENST00000340394 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
ATXN2L-203ENST00000340394 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
ATXN2L-203ENST00000340394 CEP162Q5TB80 1403 aa18.42■□□□□ 0.54
ATXN2L-203ENST00000340394 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
ATXN2L-203ENST00000340394 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
ATXN2L-203ENST00000340394 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
ATXN2L-203ENST00000340394 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
ATXN2L-203ENST00000340394 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
ATXN2L-203ENST00000340394 KIF21BO75037 1637 aa18.29■□□□□ 0.52
ATXN2L-203ENST00000340394 APLP2Q06481 763 aa18.28■□□□□ 0.52
ATXN2L-203ENST00000340394 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
ATXN2L-203ENST00000340394 CFTRP13569 1480 aa18.27■□□□□ 0.52
ATXN2L-203ENST00000340394 NEFLP07196 543 aa18.27■□□□□ 0.52
ATXN2L-203ENST00000340394 ITGAEP38570 1179 aa18.2■□□□□ 0.5
ATXN2L-203ENST00000340394 CUX1P39880 1505 aa18.2■□□□□ 0.5
ATXN2L-203ENST00000340394 CC2D2AQ9P2K1 1620 aa18.19■□□□□ 0.5
ATXN2L-203ENST00000340394 RAPGEF2Q9Y4G8 1499 aa18.17■□□□□ 0.5
ATXN2L-203ENST00000340394 CLIP1P30622 1438 aa18.17■□□□□ 0.5
ATXN2L-203ENST00000340394 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
ATXN2L-203ENST00000340394 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
ATXN2L-203ENST00000340394 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
ATXN2L-203ENST00000340394 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
ATXN2L-203ENST00000340394 FKBP8Q14318 412 aa18.1■□□□□ 0.49
ATXN2L-203ENST00000340394 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
ATXN2L-203ENST00000340394 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
ATXN2L-203ENST00000340394 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
ATXN2L-203ENST00000340394 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
ATXN2L-203ENST00000340394 TSHZ2Q9NRE2 1034 aa18.02■□□□□ 0.48
ATXN2L-203ENST00000340394 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
ATXN2L-203ENST00000340394 CUX2O14529 1486 aa17.97■□□□□ 0.47
ATXN2L-203ENST00000340394 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
ATXN2L-203ENST00000340394 ARID3CA6NKF2 412 aa17.96■□□□□ 0.47
ATXN2L-203ENST00000340394 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
ATXN2L-203ENST00000340394 IGF1RP08069 1367 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms