RNA–Protein interactions for RNA: ENST00000338492.8

DPYSL4-201, Transcript of dihydropyrimidinase like 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DPYSL4, Length 2,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPYSL4-201ENST00000338492 NISCHQ9Y2I1 1504 aa30.89■■■□□ 2.54
DPYSL4-201ENST00000338492 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
DPYSL4-201ENST00000338492 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
DPYSL4-201ENST00000338492 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
DPYSL4-201ENST00000338492 ZCCHC6Q5VYS8 1495 aaKnown RBP25.95■■□□□ 1.74
DPYSL4-201ENST00000338492 ABCC9O60706 1549 aa25.56■■□□□ 1.68
DPYSL4-201ENST00000338492 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.62
DPYSL4-201ENST00000338492 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
DPYSL4-201ENST00000338492 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
DPYSL4-201ENST00000338492 NACADO15069 1562 aa24.7■■□□□ 1.55
DPYSL4-201ENST00000338492 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
DPYSL4-201ENST00000338492 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
DPYSL4-201ENST00000338492 HRCP23327 699 aa24.48■■□□□ 1.51
DPYSL4-201ENST00000338492 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.5
DPYSL4-201ENST00000338492 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
DPYSL4-201ENST00000338492 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
DPYSL4-201ENST00000338492 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
DPYSL4-201ENST00000338492 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
DPYSL4-201ENST00000338492 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
DPYSL4-201ENST00000338492 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.45
DPYSL4-201ENST00000338492 PCGF6Q9BYE7 350 aa23.97■■□□□ 1.43
DPYSL4-201ENST00000338492 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
DPYSL4-201ENST00000338492 WIZO95785 1651 aa23.9■■□□□ 1.42
DPYSL4-201ENST00000338492 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
DPYSL4-201ENST00000338492 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
DPYSL4-201ENST00000338492 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
DPYSL4-201ENST00000338492 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
DPYSL4-201ENST00000338492 TRIM41Q8WV44 630 aa23.39■■□□□ 1.34
DPYSL4-201ENST00000338492 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.33
DPYSL4-201ENST00000338492 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
DPYSL4-201ENST00000338492 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
DPYSL4-201ENST00000338492 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
DPYSL4-201ENST00000338492 SCAF1Q9H7N4 1312 aaKnown RBP23.34■■□□□ 1.33
DPYSL4-201ENST00000338492 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
DPYSL4-201ENST00000338492 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
DPYSL4-201ENST00000338492 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
DPYSL4-201ENST00000338492 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
DPYSL4-201ENST00000338492 PEG3Q9GZU2 1588 aa23.15■■□□□ 1.3
DPYSL4-201ENST00000338492 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
DPYSL4-201ENST00000338492 TRIM26Q12899 539 aaPredicted RBP23.1■■□□□ 1.29
DPYSL4-201ENST00000338492 NCAPD3P42695 1498 aa22.94■■□□□ 1.26
DPYSL4-201ENST00000338492 MYT1Q01538 1121 aa22.94■■□□□ 1.26
DPYSL4-201ENST00000338492 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
DPYSL4-201ENST00000338492 CC2D2AQ9P2K1 1620 aa22.88■■□□□ 1.25
DPYSL4-201ENST00000338492 ZEB1P37275 1124 aaPredicted RBP22.86■■□□□ 1.25
DPYSL4-201ENST00000338492 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
DPYSL4-201ENST00000338492 SOGA1O94964 1423 aa22.79■■□□□ 1.24
DPYSL4-201ENST00000338492 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
DPYSL4-201ENST00000338492 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
DPYSL4-201ENST00000338492 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
DPYSL4-201ENST00000338492 ACIN1Q9UKV3 1341 aaKnown RBP22.65■■□□□ 1.22
DPYSL4-201ENST00000338492 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
DPYSL4-201ENST00000338492 CFTRP13569 1480 aa22.56■■□□□ 1.2
DPYSL4-201ENST00000338492 GTF3C3Q9Y5Q9 886 aa22.54■■□□□ 1.2
DPYSL4-201ENST00000338492 NESP48681 1621 aa22.54■■□□□ 1.2
DPYSL4-201ENST00000338492 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
DPYSL4-201ENST00000338492 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
DPYSL4-201ENST00000338492 UBTFP17480 764 aaKnown RBP22.44■■□□□ 1.18
DPYSL4-201ENST00000338492 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
DPYSL4-201ENST00000338492 CUX1P39880 1505 aa22.44■■□□□ 1.18
DPYSL4-201ENST00000338492 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
DPYSL4-201ENST00000338492 TTBK1Q5TCY1 1321 aaPredicted RBP22.34■■□□□ 1.17
DPYSL4-201ENST00000338492 CENPBP07199 599 aaPredicted RBP22.33■■□□□ 1.16
DPYSL4-201ENST00000338492 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
DPYSL4-201ENST00000338492 BIVM-ERCC5R4GMW8 1640 aa22.25■■□□□ 1.15
DPYSL4-201ENST00000338492 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
DPYSL4-201ENST00000338492 EEA1Q15075 1411 aa22.22■■□□□ 1.15
DPYSL4-201ENST00000338492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
DPYSL4-201ENST00000338492 CEP162Q5TB80 1403 aa22.21■■□□□ 1.15
DPYSL4-201ENST00000338492 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
DPYSL4-201ENST00000338492 CCER1Q8TC90 406 aaPredicted RBP22.18■■□□□ 1.14
DPYSL4-201ENST00000338492 FGD5Q6ZNL6 1462 aa22.17■■□□□ 1.14
DPYSL4-201ENST00000338492 GOLGA3Q08378 1498 aa22.16■■□□□ 1.14
DPYSL4-201ENST00000338492 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
DPYSL4-201ENST00000338492 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
DPYSL4-201ENST00000338492 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
DPYSL4-201ENST00000338492 CUX2O14529 1486 aa22.13■■□□□ 1.13
DPYSL4-201ENST00000338492 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
DPYSL4-201ENST00000338492 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
DPYSL4-201ENST00000338492 TOPBP1Q92547 1522 aa22.06■■□□□ 1.12
DPYSL4-201ENST00000338492 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
DPYSL4-201ENST00000338492 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
DPYSL4-201ENST00000338492 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
DPYSL4-201ENST00000338492 KIF21BO75037 1637 aa22■■□□□ 1.11
DPYSL4-201ENST00000338492 IGF1RP08069 1367 aa22■■□□□ 1.11
DPYSL4-201ENST00000338492 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
DPYSL4-201ENST00000338492 PRXQ9BXM0 1461 aa21.99■■□□□ 1.11
DPYSL4-201ENST00000338492 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
DPYSL4-201ENST00000338492 TDRD9Q8NDG6 1382 aaKnown RBP21.97■■□□□ 1.11
DPYSL4-201ENST00000338492 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
DPYSL4-201ENST00000338492 CLIP1P30622 1438 aa21.96■■□□□ 1.11
DPYSL4-201ENST00000338492 DNMBPQ6XZF7 1577 aa21.96■■□□□ 1.11
DPYSL4-201ENST00000338492 CARMIL1Q5VZK9 1371 aa21.88■■□□□ 1.09
DPYSL4-201ENST00000338492 P3H3Q8IVL6 736 aa21.83■■□□□ 1.09
DPYSL4-201ENST00000338492 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
DPYSL4-201ENST00000338492 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
DPYSL4-201ENST00000338492 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.07
DPYSL4-201ENST00000338492 ERCC6Q03468 1493 aa21.74■■□□□ 1.07
DPYSL4-201ENST00000338492 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
DPYSL4-201ENST00000338492 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms