RNA–Protein interactions for RNA: ENST00000337231.5

CDR2L-201, Transcript of cerebellar degeneration related protein 2 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2L, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2L-201ENST00000337231 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
CDR2L-201ENST00000337231 SHROOM4Q9ULL8 1493 aa26.87■■□□□ 1.89
CDR2L-201ENST00000337231 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
CDR2L-201ENST00000337231 PCGF6Q9BYE7 350 aa26.08■■□□□ 1.76
CDR2L-201ENST00000337231 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
CDR2L-201ENST00000337231 HRCP23327 699 aa26.07■■□□□ 1.76
CDR2L-201ENST00000337231 PPARGC1BQ86YN6 1023 aaKnown RBP25.94■■□□□ 1.74
CDR2L-201ENST00000337231 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
CDR2L-201ENST00000337231 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
CDR2L-201ENST00000337231 LOC105371045A0A1W2PR82 267 aa25.4■■□□□ 1.66
CDR2L-201ENST00000337231 EHMT2Q96KQ7 1210 aa25.05■■□□□ 1.6
CDR2L-201ENST00000337231 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
CDR2L-201ENST00000337231 TRIM26Q12899 539 aaPredicted RBP24.95■■□□□ 1.59
CDR2L-201ENST00000337231 FAM9AQ8IZU1 332 aaPredicted RBP24.85■■□□□ 1.57
CDR2L-201ENST00000337231 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
CDR2L-201ENST00000337231 SCAF1Q9H7N4 1312 aaKnown RBP24.62■■□□□ 1.53
CDR2L-201ENST00000337231 PELP1Q8IZL8 1130 aaKnown RBP24.58■■□□□ 1.53
CDR2L-201ENST00000337231 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
CDR2L-201ENST00000337231 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
CDR2L-201ENST00000337231 CCDC180Q9P1Z9 1646 aa24.37■■□□□ 1.49
CDR2L-201ENST00000337231 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
CDR2L-201ENST00000337231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
CDR2L-201ENST00000337231 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
CDR2L-201ENST00000337231 NEUROD1Q13562 356 aa24.13■■□□□ 1.45
CDR2L-201ENST00000337231 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
CDR2L-201ENST00000337231 GTF3C3Q9Y5Q9 886 aa24.05■■□□□ 1.44
CDR2L-201ENST00000337231 YTHDC1Q96MU7 727 aaKnown RBP23.95■■□□□ 1.42
CDR2L-201ENST00000337231 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
CDR2L-201ENST00000337231 ABCC9O60706 1549 aa23.94■■□□□ 1.42
CDR2L-201ENST00000337231 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
CDR2L-201ENST00000337231 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
CDR2L-201ENST00000337231 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
CDR2L-201ENST00000337231 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
CDR2L-201ENST00000337231 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
CDR2L-201ENST00000337231 MYT1Q01538 1121 aa23.44■■□□□ 1.34
CDR2L-201ENST00000337231 HNRNPUL2Q1KMD3 747 aaKnown RBP23.43■■□□□ 1.34
CDR2L-201ENST00000337231 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
CDR2L-201ENST00000337231 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
CDR2L-201ENST00000337231 MIER1Q8N108 512 aa23.36■■□□□ 1.33
CDR2L-201ENST00000337231 RANGAP1P46060 587 aaPredicted RBP23.36■■□□□ 1.33
CDR2L-201ENST00000337231 PABPN1Q86U42 306 aaKnown RBP eCLIP23.34■■□□□ 1.33
CDR2L-201ENST00000337231 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
CDR2L-201ENST00000337231 CEP162Q5TB80 1403 aa23.18■■□□□ 1.3
CDR2L-201ENST00000337231 WIZO95785 1651 aa23.09■■□□□ 1.29
CDR2L-201ENST00000337231 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
CDR2L-201ENST00000337231 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
CDR2L-201ENST00000337231 SOGA1O94964 1423 aa23.05■■□□□ 1.28
CDR2L-201ENST00000337231 APLP2Q06481 763 aa23.04■■□□□ 1.28
CDR2L-201ENST00000337231 CSRNP3Q8WYN3 585 aa23.03■■□□□ 1.28
CDR2L-201ENST00000337231 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
CDR2L-201ENST00000337231 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.26
CDR2L-201ENST00000337231 TNIKQ9UKE5 1360 aa22.88■■□□□ 1.25
CDR2L-201ENST00000337231 BCANQ96GW7 911 aa22.84■■□□□ 1.25
CDR2L-201ENST00000337231 SUPT16HQ9Y5B9 1047 aaKnown RBP22.8■■□□□ 1.24
CDR2L-201ENST00000337231 ITGAEP38570 1179 aa22.77■■□□□ 1.23
CDR2L-201ENST00000337231 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
CDR2L-201ENST00000337231 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
CDR2L-201ENST00000337231 CLIP1P30622 1438 aa22.65■■□□□ 1.22
CDR2L-201ENST00000337231 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
CDR2L-201ENST00000337231 KCNH8Q96L42 1107 aa22.59■■□□□ 1.21
CDR2L-201ENST00000337231 NACADO15069 1562 aa22.56■■□□□ 1.2
CDR2L-201ENST00000337231 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
CDR2L-201ENST00000337231 EEA1Q15075 1411 aa22.53■■□□□ 1.2
CDR2L-201ENST00000337231 ANP32EQ9BTT0 268 aa22.49■■□□□ 1.19
CDR2L-201ENST00000337231 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
CDR2L-201ENST00000337231 FKBP8Q14318 412 aa22.48■■□□□ 1.19
CDR2L-201ENST00000337231 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
CDR2L-201ENST00000337231 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
CDR2L-201ENST00000337231 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
CDR2L-201ENST00000337231 KANK4Q5T7N3 995 aaPredicted RBP22.41■■□□□ 1.18
CDR2L-201ENST00000337231 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
CDR2L-201ENST00000337231 HIRIP3Q9BW71 556 aaPredicted RBP22.4■■□□□ 1.18
CDR2L-201ENST00000337231 DDX10Q13206 875 aaKnown RBP22.39■■□□□ 1.17
CDR2L-201ENST00000337231 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
CDR2L-201ENST00000337231 RAPGEF2Q9Y4G8 1499 aa22.36■■□□□ 1.17
CDR2L-201ENST00000337231 NEFLP07196 543 aa22.36■■□□□ 1.17
CDR2L-201ENST00000337231 BCL11AQ9H165 835 aa22.35■■□□□ 1.17
CDR2L-201ENST00000337231 TRIM52Q96A61 297 aa22.35■■□□□ 1.17
CDR2L-201ENST00000337231 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
CDR2L-201ENST00000337231 ATP1B4Q9UN42 357 aaPredicted RBP22.27■■□□□ 1.16
CDR2L-201ENST00000337231 SIN3AQ96ST3 1273 aa22.19■■□□□ 1.14
CDR2L-201ENST00000337231 SYNJ1O43426 1573 aa22.18■■□□□ 1.14
CDR2L-201ENST00000337231 KIF21BO75037 1637 aa22.18■■□□□ 1.14
CDR2L-201ENST00000337231 FAM50AQ14320 339 aaKnown RBP22.18■■□□□ 1.14
CDR2L-201ENST00000337231 RBM19Q9Y4C8 960 aaKnown RBP22.16■■□□□ 1.14
CDR2L-201ENST00000337231 IRX6P78412 446 aaPredicted RBP22.15■■□□□ 1.14
CDR2L-201ENST00000337231 ERICH6Q7L0X2 663 aa22.1■■□□□ 1.13
CDR2L-201ENST00000337231 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
CDR2L-201ENST00000337231 ANP32CO43423 234 aa22.05■■□□□ 1.12
CDR2L-201ENST00000337231 RAB3GAP2Q9H2M9 1393 aa22.04■■□□□ 1.12
CDR2L-201ENST00000337231 P3H3Q8IVL6 736 aa22.02■■□□□ 1.12
CDR2L-201ENST00000337231 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
CDR2L-201ENST00000337231 ARAP1Q96P48 1450 aa21.95■■□□□ 1.11
CDR2L-201ENST00000337231 HNRNPUQ00839 825 aaKnown RBP eCLIP21.93■■□□□ 1.1
CDR2L-201ENST00000337231 CNGB1Q14028 1251 aaPredicted RBP21.88■■□□□ 1.09
CDR2L-201ENST00000337231 MSH5O43196 834 aa21.86■■□□□ 1.09
CDR2L-201ENST00000337231 RRBP1Q9P2E9 1410 aaKnown RBP21.86■■□□□ 1.09
CDR2L-201ENST00000337231 CDK11AQ9UQ88 783 aaPredicted RBP21.86■■□□□ 1.09
CDR2L-201ENST00000337231 PPP1R15AO75807 674 aaPredicted RBP21.83■■□□□ 1.08
CDR2L-201ENST00000337231 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms