RNA–Protein interactions for RNA: ENST00000334268.8

TRDN-201, Transcript of triadin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRDN, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-201ENST00000334268 AEBP2Q6ZN18 517 aaPredicted RBP7.67□□□□□ -1.18
TRDN-201ENST00000334268 NISCHQ9Y2I1 1504 aa7.09□□□□□ -1.27
TRDN-201ENST00000334268 CHIC1Q5VXU3 224 aa6.82□□□□□ -1.32
TRDN-201ENST00000334268 PHF23Q9BUL5 403 aaPredicted RBP6.44□□□□□ -1.38
TRDN-201ENST00000334268 CCDC180Q9P1Z9 1646 aa6.21□□□□□ -1.42
TRDN-201ENST00000334268 ZCCHC6Q5VYS8 1495 aaKnown RBP6.01□□□□□ -1.45
TRDN-201ENST00000334268 UNC13AQ9UPW8 1703 aa6.01□□□□□ -1.45
TRDN-201ENST00000334268 ABCC9O60706 1549 aa5.95□□□□□ -1.46
TRDN-201ENST00000334268 DCAF8L2P0C7V8 631 aa5.87□□□□□ -1.47
TRDN-201ENST00000334268 DCAF1Q9Y4B6 1507 aa5.83□□□□□ -1.48
TRDN-201ENST00000334268 BICRAQ9NZM4 1560 aa5.81□□□□□ -1.48
TRDN-201ENST00000334268 FOXD1Q16676 465 aa5.77□□□□□ -1.49
TRDN-201ENST00000334268 MYO15BQ96JP2 1530 aa5.73□□□□□ -1.49
TRDN-201ENST00000334268 SCRIBQ14160 1630 aa5.73□□□□□ -1.49
TRDN-201ENST00000334268 NACADO15069 1562 aa5.73□□□□□ -1.49
TRDN-201ENST00000334268 RB1CC1Q8TDY2 1594 aa5.7□□□□□ -1.5
TRDN-201ENST00000334268 SENP3Q9H4L4 574 aaPredicted RBP5.7□□□□□ -1.5
TRDN-201ENST00000334268 SHROOM4Q9ULL8 1493 aa5.66□□□□□ -1.5
TRDN-201ENST00000334268 CECR2Q9BXF3 1484 aa5.64□□□□□ -1.51
TRDN-201ENST00000334268 EIF4G1Q04637 1599 aaKnown RBP5.64□□□□□ -1.51
TRDN-201ENST00000334268 PABPN1Q86U42 306 aaKnown RBP eCLIP5.62□□□□□ -1.51
TRDN-201ENST00000334268 WIZO95785 1651 aa5.6□□□□□ -1.51
TRDN-201ENST00000334268 MROH2BQ7Z745 1585 aa5.59□□□□□ -1.51
TRDN-201ENST00000334268 SLC24A1O60721 1099 aa5.57□□□□□ -1.52
TRDN-201ENST00000334268 PPP6R1Q9UPN7 881 aa5.55□□□□□ -1.52
TRDN-201ENST00000334268 EHMT2Q96KQ7 1210 aa5.53□□□□□ -1.52
TRDN-201ENST00000334268 SMARCA4P51532 1647 aa5.51□□□□□ -1.53
TRDN-201ENST00000334268 DNAJC5BQ9UF47 199 aa5.51□□□□□ -1.53
TRDN-201ENST00000334268 RSF1Q96T23 1441 aaPredicted RBP5.5□□□□□ -1.53
TRDN-201ENST00000334268 PEG3Q9GZU2 1588 aa5.49□□□□□ -1.53
TRDN-201ENST00000334268 BAZ1AQ9NRL2 1556 aaPredicted RBP5.46□□□□□ -1.54
TRDN-201ENST00000334268 SMARCA2P51531 1590 aa5.43□□□□□ -1.54
TRDN-201ENST00000334268 MYT1Q01538 1121 aa5.42□□□□□ -1.54
TRDN-201ENST00000334268 SUPT5HO00267 1087 aaKnown RBP5.39□□□□□ -1.55
TRDN-201ENST00000334268 CC2D2AQ9P2K1 1620 aa5.37□□□□□ -1.55
TRDN-201ENST00000334268 TOP2AP11388 1531 aaKnown RBP5.36□□□□□ -1.55
TRDN-201ENST00000334268 ATAD2BQ9ULI0 1458 aa5.35□□□□□ -1.55
TRDN-201ENST00000334268 PRDM2Q13029 1718 aa5.34□□□□□ -1.55
TRDN-201ENST00000334268 CCDC88BA6NC98 1476 aa5.33□□□□□ -1.56
TRDN-201ENST00000334268 NCAPD3P42695 1498 aa5.32□□□□□ -1.56
TRDN-201ENST00000334268 ABCC8Q09428 1581 aa5.32□□□□□ -1.56
TRDN-201ENST00000334268 SYNJ1O43426 1573 aa5.3□□□□□ -1.56
TRDN-201ENST00000334268 RANGAP1P46060 587 aaPredicted RBP5.29□□□□□ -1.56
TRDN-201ENST00000334268 BAZ1BQ9UIG0 1483 aaKnown RBP5.29□□□□□ -1.56
TRDN-201ENST00000334268 POTEDQ86YR6 584 aa5.28□□□□□ -1.56
TRDN-201ENST00000334268 KIF21AQ7Z4S6 1674 aa5.28□□□□□ -1.56
TRDN-201ENST00000334268 HMGXB3Q12766 1538 aa5.28□□□□□ -1.56
TRDN-201ENST00000334268 WDR97A6NE52 1622 aa5.26□□□□□ -1.57
TRDN-201ENST00000334268 NESP48681 1621 aa5.25□□□□□ -1.57
TRDN-201ENST00000334268 RUSC2Q8N2Y8 1516 aa5.25□□□□□ -1.57
TRDN-201ENST00000334268 PELP1Q8IZL8 1130 aaKnown RBP5.24□□□□□ -1.57
TRDN-201ENST00000334268 BIVM-ERCC5R4GMW8 1640 aa5.23□□□□□ -1.57
TRDN-201ENST00000334268 ERICH6Q7L0X2 663 aa5.22□□□□□ -1.57
TRDN-201ENST00000334268 CUX1P39880 1505 aa5.21□□□□□ -1.58
TRDN-201ENST00000334268 LRRIQ1Q96JM4 1722 aa5.19□□□□□ -1.58
TRDN-201ENST00000334268 CADPSQ9ULU8 1353 aa5.18□□□□□ -1.58
TRDN-201ENST00000334268 THOC2Q8NI27 1593 aaKnown RBP5.18□□□□□ -1.58
TRDN-201ENST00000334268 TTBK1Q5TCY1 1321 aaPredicted RBP5.17□□□□□ -1.58
TRDN-201ENST00000334268 CFTRP13569 1480 aa5.17□□□□□ -1.58
TRDN-201ENST00000334268 TOP2BQ02880 1626 aa5.16□□□□□ -1.58
TRDN-201ENST00000334268 TARBP1Q13395 1621 aaKnown RBP5.15□□□□□ -1.58
TRDN-201ENST00000334268 URB2Q14146 1524 aaKnown RBP5.14□□□□□ -1.59
TRDN-201ENST00000334268 SOGA1O94964 1423 aa5.13□□□□□ -1.59
TRDN-201ENST00000334268 LAMC3Q9Y6N6 1575 aa5.13□□□□□ -1.59
TRDN-201ENST00000334268 FANCD2Q9BXW9 1451 aa5.11□□□□□ -1.59
TRDN-201ENST00000334268 ABCA5Q8WWZ7 1642 aa5.1□□□□□ -1.59
TRDN-201ENST00000334268 PDS5BQ9NTI5 1447 aa5.1□□□□□ -1.59
TRDN-201ENST00000334268 CUX2O14529 1486 aa5.09□□□□□ -1.59
TRDN-201ENST00000334268 ADRA2BP18089 450 aa5.08□□□□□ -1.6
TRDN-201ENST00000334268 ERCC6Q03468 1493 aa5.07□□□□□ -1.6
TRDN-201ENST00000334268 CEP164Q9UPV0 1460 aa5.07□□□□□ -1.6
TRDN-201ENST00000334268 WRNQ14191 1432 aaPredicted RBP eCLIP5.07□□□□□ -1.6
TRDN-201ENST00000334268 PBRM1Q86U86 1689 aa5.07□□□□□ -1.6
TRDN-201ENST00000334268 TRIM41Q8WV44 630 aa5.05□□□□□ -1.6
TRDN-201ENST00000334268 TOPBP1Q92547 1522 aa5.05□□□□□ -1.6
TRDN-201ENST00000334268 RAD54L2Q9Y4B4 1467 aa5.04□□□□□ -1.6
TRDN-201ENST00000334268 WDR62O43379 1518 aa5.04□□□□□ -1.6
TRDN-201ENST00000334268 POLA1P09884 1462 aaPredicted RBP5.03□□□□□ -1.6
TRDN-201ENST00000334268 MRC2Q9UBG0 1479 aa5.03□□□□□ -1.6
TRDN-201ENST00000334268 LOC105371045A0A1W2PR82 267 aa5.03□□□□□ -1.6
TRDN-201ENST00000334268 AMER1Q5JTC6 1135 aaPredicted RBP5.03□□□□□ -1.6
TRDN-201ENST00000334268 ZNF608Q9ULD9 1512 aaPredicted RBP5.03□□□□□ -1.6
TRDN-201ENST00000334268 DNMBPQ6XZF7 1577 aa5.02□□□□□ -1.61
TRDN-201ENST00000334268 FGD5Q6ZNL6 1462 aa5.02□□□□□ -1.61
TRDN-201ENST00000334268 DAXXQ9UER7 740 aaPredicted RBP5.01□□□□□ -1.61
TRDN-201ENST00000334268 EIF4G3O43432 1585 aaKnown RBP5□□□□□ -1.61
TRDN-201ENST00000334268 RAPGEF2Q9Y4G8 1499 aa5□□□□□ -1.61
TRDN-201ENST00000334268 KIF21BO75037 1637 aa5□□□□□ -1.61
TRDN-201ENST00000334268 TDRD9Q8NDG6 1382 aaKnown RBP5□□□□□ -1.61
TRDN-201ENST00000334268 PRXQ9BXM0 1461 aa4.99□□□□□ -1.61
TRDN-201ENST00000334268 FAM9AQ8IZU1 332 aaPredicted RBP4.99□□□□□ -1.61
TRDN-201ENST00000334268 AQRO60306 1485 aaKnown RBP eCLIP4.97□□□□□ -1.61
TRDN-201ENST00000334268 CTTNBP2Q8WZ74 1663 aa4.97□□□□□ -1.61
TRDN-201ENST00000334268 ERCC6L2Q5T890 1561 aa4.97□□□□□ -1.61
TRDN-201ENST00000334268 ABCA10Q8WWZ4 1543 aa4.96□□□□□ -1.61
TRDN-201ENST00000334268 RTN4Q9NQC3 1192 aaKnown RBP4.96□□□□□ -1.61
TRDN-201ENST00000334268 CEP170Q5SW79 1584 aa4.96□□□□□ -1.61
TRDN-201ENST00000334268 CHD1O14646 1710 aa4.96□□□□□ -1.62
TRDN-201ENST00000334268 HOXD11P31277 338 aaPredicted RBP4.95□□□□□ -1.62
TRDN-201ENST00000334268 IFT140Q96RY7 1462 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms