RNA–Protein interactions for RNA: ENST00000333942.10

RHOT1-201, Transcript of ras homolog family member T1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RHOT1, Length 3,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-201ENST00000333942 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
RHOT1-201ENST00000333942 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
RHOT1-201ENST00000333942 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
RHOT1-201ENST00000333942 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
RHOT1-201ENST00000333942 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
RHOT1-201ENST00000333942 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
RHOT1-201ENST00000333942 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
RHOT1-201ENST00000333942 PPARGC1BQ86YN6 1023 aaKnown RBP28.56■■■□□ 2.16
RHOT1-201ENST00000333942 PCGF6Q9BYE7 350 aa28.56■■■□□ 2.16
RHOT1-201ENST00000333942 HRCP23327 699 aa28.49■■■□□ 2.15
RHOT1-201ENST00000333942 LOC105371045A0A1W2PR82 267 aa28.2■■■□□ 2.1
RHOT1-201ENST00000333942 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
RHOT1-201ENST00000333942 EHMT2Q96KQ7 1210 aa27.68■■■□□ 2.02
RHOT1-201ENST00000333942 FAM9AQ8IZU1 332 aaPredicted RBP27.61■■■□□ 2.01
RHOT1-201ENST00000333942 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
RHOT1-201ENST00000333942 TRIM26Q12899 539 aaPredicted RBP27.56■■■□□ 2
RHOT1-201ENST00000333942 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
RHOT1-201ENST00000333942 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.93
RHOT1-201ENST00000333942 SCRIBQ14160 1630 aa27.14■■□□□ 1.93
RHOT1-201ENST00000333942 SCAF1Q9H7N4 1312 aaKnown RBP27.11■■□□□ 1.93
RHOT1-201ENST00000333942 ABCC9O60706 1549 aa27.04■■□□□ 1.92
RHOT1-201ENST00000333942 ZEB1P37275 1124 aaPredicted RBP26.98■■□□□ 1.91
RHOT1-201ENST00000333942 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
RHOT1-201ENST00000333942 TTBK1Q5TCY1 1321 aaPredicted RBP26.82■■□□□ 1.88
RHOT1-201ENST00000333942 PELP1Q8IZL8 1130 aaKnown RBP26.81■■□□□ 1.88
RHOT1-201ENST00000333942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.73■■□□□ 1.87
RHOT1-201ENST00000333942 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
RHOT1-201ENST00000333942 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
RHOT1-201ENST00000333942 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
RHOT1-201ENST00000333942 NEUROD1Q13562 356 aa26.5■■□□□ 1.83
RHOT1-201ENST00000333942 WIZO95785 1651 aa26.38■■□□□ 1.81
RHOT1-201ENST00000333942 GTF3C3Q9Y5Q9 886 aa26.37■■□□□ 1.81
RHOT1-201ENST00000333942 ACIN1Q9UKV3 1341 aaKnown RBP26.32■■□□□ 1.8
RHOT1-201ENST00000333942 UBTFP17480 764 aaKnown RBP26.21■■□□□ 1.79
RHOT1-201ENST00000333942 DIEXFQ68CQ4 756 aaKnown RBP26.21■■□□□ 1.79
RHOT1-201ENST00000333942 YTHDC1Q96MU7 727 aaKnown RBP26.2■■□□□ 1.78
RHOT1-201ENST00000333942 NACADO15069 1562 aa26.18■■□□□ 1.78
RHOT1-201ENST00000333942 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
RHOT1-201ENST00000333942 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
RHOT1-201ENST00000333942 SOGA1O94964 1423 aa26.02■■□□□ 1.76
RHOT1-201ENST00000333942 CEP162Q5TB80 1403 aa26■■□□□ 1.75
RHOT1-201ENST00000333942 RANGAP1P46060 587 aaPredicted RBP25.99■■□□□ 1.75
RHOT1-201ENST00000333942 CENPBP07199 599 aaPredicted RBP25.98■■□□□ 1.75
RHOT1-201ENST00000333942 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
RHOT1-201ENST00000333942 HNRNPUL2Q1KMD3 747 aaKnown RBP25.95■■□□□ 1.75
RHOT1-201ENST00000333942 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.75
RHOT1-201ENST00000333942 PABPN1Q86U42 306 aaKnown RBP eCLIP25.89■■□□□ 1.74
RHOT1-201ENST00000333942 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
RHOT1-201ENST00000333942 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
RHOT1-201ENST00000333942 ZNF316A6NFI3 1004 aaPredicted RBP25.79■■□□□ 1.72
RHOT1-201ENST00000333942 TNIKQ9UKE5 1360 aa25.78■■□□□ 1.72
RHOT1-201ENST00000333942 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
RHOT1-201ENST00000333942 TOP2AP11388 1531 aaKnown RBP25.75■■□□□ 1.71
RHOT1-201ENST00000333942 SMARCA2P51531 1590 aa25.7■■□□□ 1.7
RHOT1-201ENST00000333942 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
RHOT1-201ENST00000333942 APLP2Q06481 763 aa25.66■■□□□ 1.7
RHOT1-201ENST00000333942 MIER1Q8N108 512 aa25.63■■□□□ 1.69
RHOT1-201ENST00000333942 GOLGA3Q08378 1498 aa25.57■■□□□ 1.68
RHOT1-201ENST00000333942 EEA1Q15075 1411 aa25.52■■□□□ 1.68
RHOT1-201ENST00000333942 MYT1Q01538 1121 aa25.5■■□□□ 1.67
RHOT1-201ENST00000333942 CLIP1P30622 1438 aa25.47■■□□□ 1.67
RHOT1-201ENST00000333942 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
RHOT1-201ENST00000333942 UNC13AQ9UPW8 1703 aa25.31■■□□□ 1.64
RHOT1-201ENST00000333942 RAPGEF2Q9Y4G8 1499 aa25.28■■□□□ 1.64
RHOT1-201ENST00000333942 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
RHOT1-201ENST00000333942 ITGAEP38570 1179 aa25.26■■□□□ 1.63
RHOT1-201ENST00000333942 VPS8Q8N3P4 1428 aa25.25■■□□□ 1.63
RHOT1-201ENST00000333942 KANK4Q5T7N3 995 aaPredicted RBP25.15■■□□□ 1.62
RHOT1-201ENST00000333942 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
RHOT1-201ENST00000333942 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
RHOT1-201ENST00000333942 KIF21BO75037 1637 aa25.07■■□□□ 1.6
RHOT1-201ENST00000333942 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
RHOT1-201ENST00000333942 BCANQ96GW7 911 aa25.01■■□□□ 1.59
RHOT1-201ENST00000333942 DHX57Q6P158 1386 aaKnown RBP24.99■■□□□ 1.59
RHOT1-201ENST00000333942 SUPT16HQ9Y5B9 1047 aaKnown RBP24.94■■□□□ 1.58
RHOT1-201ENST00000333942 ATP1B4Q9UN42 357 aaPredicted RBP24.87■■□□□ 1.57
RHOT1-201ENST00000333942 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
RHOT1-201ENST00000333942 KCNH8Q96L42 1107 aa24.86■■□□□ 1.57
RHOT1-201ENST00000333942 ARAP1Q96P48 1450 aa24.82■■□□□ 1.56
RHOT1-201ENST00000333942 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
RHOT1-201ENST00000333942 TSHZ2Q9NRE2 1034 aa24.79■■□□□ 1.56
RHOT1-201ENST00000333942 P3H3Q8IVL6 736 aa24.76■■□□□ 1.55
RHOT1-201ENST00000333942 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
RHOT1-201ENST00000333942 CCNB3Q8WWL7 1395 aa24.74■■□□□ 1.55
RHOT1-201ENST00000333942 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
RHOT1-201ENST00000333942 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
RHOT1-201ENST00000333942 HIRIP3Q9BW71 556 aaPredicted RBP24.73■■□□□ 1.55
RHOT1-201ENST00000333942 DDX10Q13206 875 aaKnown RBP24.7■■□□□ 1.55
RHOT1-201ENST00000333942 KIF27Q86VH2 1401 aa24.7■■□□□ 1.54
RHOT1-201ENST00000333942 SIN3AQ96ST3 1273 aa24.7■■□□□ 1.54
RHOT1-201ENST00000333942 BCL11AQ9H165 835 aa24.67■■□□□ 1.54
RHOT1-201ENST00000333942 ANP32EQ9BTT0 268 aa24.65■■□□□ 1.54
RHOT1-201ENST00000333942 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.54
RHOT1-201ENST00000333942 RRBP1Q9P2E9 1410 aaKnown RBP24.62■■□□□ 1.53
RHOT1-201ENST00000333942 CUX1P39880 1505 aa24.6■■□□□ 1.53
RHOT1-201ENST00000333942 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
RHOT1-201ENST00000333942 ARHGAP35Q9NRY4 1499 aa24.59■■□□□ 1.53
RHOT1-201ENST00000333942 FKBP8Q14318 412 aa24.54■■□□□ 1.52
RHOT1-201ENST00000333942 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
RHOT1-201ENST00000333942 TRIM52Q96A61 297 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms