RNA–Protein interactions for RNA: ENST00000333418.4

POLR2F-201, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2

Gene POLR2F, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-201ENST00000333418 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
POLR2F-201ENST00000333418 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
POLR2F-201ENST00000333418 ABCC9O60706 1549 aa22.06■■□□□ 1.12
POLR2F-201ENST00000333418 DCAF8L2P0C7V8 631 aa21.16■□□□□ 0.98
POLR2F-201ENST00000333418 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.98
POLR2F-201ENST00000333418 NACADO15069 1562 aa21.08■□□□□ 0.97
POLR2F-201ENST00000333418 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
POLR2F-201ENST00000333418 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
POLR2F-201ENST00000333418 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
POLR2F-201ENST00000333418 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
POLR2F-201ENST00000333418 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
POLR2F-201ENST00000333418 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
POLR2F-201ENST00000333418 SCRIBQ14160 1630 aa20.42■□□□□ 0.86
POLR2F-201ENST00000333418 DNAJC5BQ9UF47 199 aa20.38■□□□□ 0.85
POLR2F-201ENST00000333418 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
POLR2F-201ENST00000333418 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
POLR2F-201ENST00000333418 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
POLR2F-201ENST00000333418 CECR2Q9BXF3 1484 aa19.85■□□□□ 0.77
POLR2F-201ENST00000333418 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
POLR2F-201ENST00000333418 BAZ1AQ9NRL2 1556 aaPredicted RBP19.47■□□□□ 0.71
POLR2F-201ENST00000333418 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
POLR2F-201ENST00000333418 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
POLR2F-201ENST00000333418 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
POLR2F-201ENST00000333418 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
POLR2F-201ENST00000333418 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
POLR2F-201ENST00000333418 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
POLR2F-201ENST00000333418 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
POLR2F-201ENST00000333418 WIZO95785 1651 aa19.13■□□□□ 0.65
POLR2F-201ENST00000333418 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
POLR2F-201ENST00000333418 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
POLR2F-201ENST00000333418 NESP48681 1621 aa19.03■□□□□ 0.64
POLR2F-201ENST00000333418 LAMC3Q9Y6N6 1575 aa18.96■□□□□ 0.63
POLR2F-201ENST00000333418 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
POLR2F-201ENST00000333418 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
POLR2F-201ENST00000333418 PDS5BQ9NTI5 1447 aa18.88■□□□□ 0.61
POLR2F-201ENST00000333418 CUX2O14529 1486 aa18.87■□□□□ 0.61
POLR2F-201ENST00000333418 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
POLR2F-201ENST00000333418 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
POLR2F-201ENST00000333418 CFTRP13569 1480 aa18.74■□□□□ 0.59
POLR2F-201ENST00000333418 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
POLR2F-201ENST00000333418 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
POLR2F-201ENST00000333418 MRC2Q9UBG0 1479 aa18.66■□□□□ 0.58
POLR2F-201ENST00000333418 CEP164Q9UPV0 1460 aa18.66■□□□□ 0.58
POLR2F-201ENST00000333418 WDR62O43379 1518 aa18.59■□□□□ 0.57
POLR2F-201ENST00000333418 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
POLR2F-201ENST00000333418 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
POLR2F-201ENST00000333418 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
POLR2F-201ENST00000333418 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
POLR2F-201ENST00000333418 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
POLR2F-201ENST00000333418 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
POLR2F-201ENST00000333418 DNMBPQ6XZF7 1577 aa18.31■□□□□ 0.52
POLR2F-201ENST00000333418 IFT140Q96RY7 1462 aa18.28■□□□□ 0.52
POLR2F-201ENST00000333418 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
POLR2F-201ENST00000333418 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
POLR2F-201ENST00000333418 CUX1P39880 1505 aa18.15■□□□□ 0.5
POLR2F-201ENST00000333418 TARBP1Q13395 1621 aaKnown RBP18.14■□□□□ 0.49
POLR2F-201ENST00000333418 SOGA1O94964 1423 aa18.14■□□□□ 0.49
POLR2F-201ENST00000333418 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
POLR2F-201ENST00000333418 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
POLR2F-201ENST00000333418 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
POLR2F-201ENST00000333418 AQRO60306 1485 aaKnown RBP eCLIP18.11■□□□□ 0.49
POLR2F-201ENST00000333418 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
POLR2F-201ENST00000333418 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
POLR2F-201ENST00000333418 WRNQ14191 1432 aaPredicted RBP eCLIP18.01■□□□□ 0.47
POLR2F-201ENST00000333418 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
POLR2F-201ENST00000333418 FBLN2P98095 1184 aa17.99■□□□□ 0.47
POLR2F-201ENST00000333418 TOP2BQ02880 1626 aa17.96■□□□□ 0.47
POLR2F-201ENST00000333418 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
POLR2F-201ENST00000333418 BIVM-ERCC5R4GMW8 1640 aa17.94■□□□□ 0.46
POLR2F-201ENST00000333418 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
POLR2F-201ENST00000333418 GRIN2BQ13224 1484 aa17.93■□□□□ 0.46
POLR2F-201ENST00000333418 GAPVD1Q14C86 1478 aa17.92■□□□□ 0.46
POLR2F-201ENST00000333418 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
POLR2F-201ENST00000333418 CHD1O14646 1710 aa17.92■□□□□ 0.46
POLR2F-201ENST00000333418 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
POLR2F-201ENST00000333418 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
POLR2F-201ENST00000333418 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
POLR2F-201ENST00000333418 PBRM1Q86U86 1689 aa17.86■□□□□ 0.45
POLR2F-201ENST00000333418 ABCA5Q8WWZ7 1642 aa17.85■□□□□ 0.45
POLR2F-201ENST00000333418 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
POLR2F-201ENST00000333418 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
POLR2F-201ENST00000333418 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
POLR2F-201ENST00000333418 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
POLR2F-201ENST00000333418 ARHGEF11O15085 1522 aa17.77■□□□□ 0.43
POLR2F-201ENST00000333418 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
POLR2F-201ENST00000333418 CLASP1Q7Z460 1538 aa17.7■□□□□ 0.42
POLR2F-201ENST00000333418 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
POLR2F-201ENST00000333418 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
POLR2F-201ENST00000333418 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
POLR2F-201ENST00000333418 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
POLR2F-201ENST00000333418 KIF27Q86VH2 1401 aa17.65■□□□□ 0.42
POLR2F-201ENST00000333418 NUP160Q12769 1436 aa17.61■□□□□ 0.41
POLR2F-201ENST00000333418 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
POLR2F-201ENST00000333418 IGF1RP08069 1367 aa17.6■□□□□ 0.41
POLR2F-201ENST00000333418 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
POLR2F-201ENST00000333418 CUL7Q14999 1698 aa17.52■□□□□ 0.4
POLR2F-201ENST00000333418 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
POLR2F-201ENST00000333418 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
POLR2F-201ENST00000333418 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
POLR2F-201ENST00000333418 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms