RNA–Protein interactions for RNA: ENST00000332539.4

PTGDR2-201, Transcript of prostaglandin D2 receptor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGDR2, Length 2,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGDR2-201ENST00000332539 NISCHQ9Y2I1 1504 aa33.11■■■□□ 2.89
PTGDR2-201ENST00000332539 SHROOM4Q9ULL8 1493 aa29.09■■■□□ 2.25
PTGDR2-201ENST00000332539 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.18
PTGDR2-201ENST00000332539 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
PTGDR2-201ENST00000332539 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
PTGDR2-201ENST00000332539 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
PTGDR2-201ENST00000332539 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
PTGDR2-201ENST00000332539 HRCP23327 699 aa27.81■■■□□ 2.04
PTGDR2-201ENST00000332539 CCDC180Q9P1Z9 1646 aa27.73■■■□□ 2.03
PTGDR2-201ENST00000332539 PCGF6Q9BYE7 350 aa27.7■■■□□ 2.02
PTGDR2-201ENST00000332539 PPARGC1BQ86YN6 1023 aaKnown RBP27.48■■□□□ 1.99
PTGDR2-201ENST00000332539 LOC105371045A0A1W2PR82 267 aa27.32■■□□□ 1.96
PTGDR2-201ENST00000332539 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
PTGDR2-201ENST00000332539 TRIM26Q12899 539 aaPredicted RBP26.8■■□□□ 1.88
PTGDR2-201ENST00000332539 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
PTGDR2-201ENST00000332539 ABCC9O60706 1549 aa26.58■■□□□ 1.85
PTGDR2-201ENST00000332539 EHMT2Q96KQ7 1210 aa26.58■■□□□ 1.85
PTGDR2-201ENST00000332539 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
PTGDR2-201ENST00000332539 SCRIBQ14160 1630 aa26.48■■□□□ 1.83
PTGDR2-201ENST00000332539 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
PTGDR2-201ENST00000332539 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
PTGDR2-201ENST00000332539 ZEB1P37275 1124 aaPredicted RBP26.31■■□□□ 1.8
PTGDR2-201ENST00000332539 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
PTGDR2-201ENST00000332539 CECR2Q9BXF3 1484 aa26.02■■□□□ 1.76
PTGDR2-201ENST00000332539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.91■■□□□ 1.74
PTGDR2-201ENST00000332539 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
PTGDR2-201ENST00000332539 WIZO95785 1651 aa25.83■■□□□ 1.73
PTGDR2-201ENST00000332539 TTBK1Q5TCY1 1321 aaPredicted RBP25.8■■□□□ 1.72
PTGDR2-201ENST00000332539 PELP1Q8IZL8 1130 aaKnown RBP25.79■■□□□ 1.72
PTGDR2-201ENST00000332539 CCER1Q8TC90 406 aaPredicted RBP25.76■■□□□ 1.71
PTGDR2-201ENST00000332539 NACADO15069 1562 aa25.58■■□□□ 1.69
PTGDR2-201ENST00000332539 NEUROD1Q13562 356 aa25.58■■□□□ 1.68
PTGDR2-201ENST00000332539 ACIN1Q9UKV3 1341 aaKnown RBP25.52■■□□□ 1.68
PTGDR2-201ENST00000332539 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
PTGDR2-201ENST00000332539 BAZ1AQ9NRL2 1556 aaPredicted RBP25.51■■□□□ 1.67
PTGDR2-201ENST00000332539 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
PTGDR2-201ENST00000332539 DIEXFQ68CQ4 756 aaKnown RBP25.47■■□□□ 1.67
PTGDR2-201ENST00000332539 CCDC88BA6NC98 1476 aa25.45■■□□□ 1.66
PTGDR2-201ENST00000332539 GTF3C3Q9Y5Q9 886 aa25.37■■□□□ 1.65
PTGDR2-201ENST00000332539 CEP162Q5TB80 1403 aa25.36■■□□□ 1.65
PTGDR2-201ENST00000332539 SOGA1O94964 1423 aa25.34■■□□□ 1.65
PTGDR2-201ENST00000332539 CENPBP07199 599 aaPredicted RBP25.27■■□□□ 1.64
PTGDR2-201ENST00000332539 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
PTGDR2-201ENST00000332539 UBTFP17480 764 aaKnown RBP25.25■■□□□ 1.63
PTGDR2-201ENST00000332539 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
PTGDR2-201ENST00000332539 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
PTGDR2-201ENST00000332539 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
PTGDR2-201ENST00000332539 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
PTGDR2-201ENST00000332539 YTHDC1Q96MU7 727 aaKnown RBP25.15■■□□□ 1.62
PTGDR2-201ENST00000332539 CSRNP3Q8WYN3 585 aa25.14■■□□□ 1.62
PTGDR2-201ENST00000332539 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
PTGDR2-201ENST00000332539 ZNF316A6NFI3 1004 aaPredicted RBP25.08■■□□□ 1.61
PTGDR2-201ENST00000332539 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
PTGDR2-201ENST00000332539 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
PTGDR2-201ENST00000332539 RANGAP1P46060 587 aaPredicted RBP24.94■■□□□ 1.58
PTGDR2-201ENST00000332539 UNC13AQ9UPW8 1703 aa24.93■■□□□ 1.58
PTGDR2-201ENST00000332539 MIER1Q8N108 512 aa24.93■■□□□ 1.58
PTGDR2-201ENST00000332539 EEA1Q15075 1411 aa24.92■■□□□ 1.58
PTGDR2-201ENST00000332539 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
PTGDR2-201ENST00000332539 CLIP1P30622 1438 aa24.77■■□□□ 1.56
PTGDR2-201ENST00000332539 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
PTGDR2-201ENST00000332539 CEP164Q9UPV0 1460 aa24.73■■□□□ 1.55
PTGDR2-201ENST00000332539 APLP2Q06481 763 aa24.68■■□□□ 1.54
PTGDR2-201ENST00000332539 VPS8Q8N3P4 1428 aa24.65■■□□□ 1.54
PTGDR2-201ENST00000332539 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
PTGDR2-201ENST00000332539 KIF21BO75037 1637 aa24.64■■□□□ 1.53
PTGDR2-201ENST00000332539 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
PTGDR2-201ENST00000332539 MYT1Q01538 1121 aa24.55■■□□□ 1.52
PTGDR2-201ENST00000332539 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.51
PTGDR2-201ENST00000332539 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
PTGDR2-201ENST00000332539 KANK4Q5T7N3 995 aaPredicted RBP24.41■■□□□ 1.5
PTGDR2-201ENST00000332539 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
PTGDR2-201ENST00000332539 DHX57Q6P158 1386 aaKnown RBP24.41■■□□□ 1.5
PTGDR2-201ENST00000332539 ITGAEP38570 1179 aa24.31■■□□□ 1.48
PTGDR2-201ENST00000332539 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
PTGDR2-201ENST00000332539 TOP2BQ02880 1626 aa24.27■■□□□ 1.48
PTGDR2-201ENST00000332539 SUPT16HQ9Y5B9 1047 aaKnown RBP24.25■■□□□ 1.47
PTGDR2-201ENST00000332539 CLSPNQ9HAW4 1339 aa24.22■■□□□ 1.47
PTGDR2-201ENST00000332539 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
PTGDR2-201ENST00000332539 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
PTGDR2-201ENST00000332539 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
PTGDR2-201ENST00000332539 ERICH3Q5RHP9 1530 aa24.13■■□□□ 1.45
PTGDR2-201ENST00000332539 RRBP1Q9P2E9 1410 aaKnown RBP24.1■■□□□ 1.45
PTGDR2-201ENST00000332539 CCNB3Q8WWL7 1395 aa24.07■■□□□ 1.44
PTGDR2-201ENST00000332539 CUX1P39880 1505 aa24.05■■□□□ 1.44
PTGDR2-201ENST00000332539 ARHGAP35Q9NRY4 1499 aa24.02■■□□□ 1.44
PTGDR2-201ENST00000332539 KIF27Q86VH2 1401 aa24■■□□□ 1.43
PTGDR2-201ENST00000332539 BCANQ96GW7 911 aa23.99■■□□□ 1.43
PTGDR2-201ENST00000332539 RAB3GAP2Q9H2M9 1393 aa23.99■■□□□ 1.43
PTGDR2-201ENST00000332539 TSHZ2Q9NRE2 1034 aa23.97■■□□□ 1.43
PTGDR2-201ENST00000332539 CUX2O14529 1486 aa23.94■■□□□ 1.42
PTGDR2-201ENST00000332539 SIN3AQ96ST3 1273 aa23.92■■□□□ 1.42
PTGDR2-201ENST00000332539 MAPKBP1O60336 1514 aa23.92■■□□□ 1.42
PTGDR2-201ENST00000332539 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
PTGDR2-201ENST00000332539 HIRIP3Q9BW71 556 aaPredicted RBP23.89■■□□□ 1.42
PTGDR2-201ENST00000332539 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
PTGDR2-201ENST00000332539 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.41
PTGDR2-201ENST00000332539 P3H3Q8IVL6 736 aa23.82■■□□□ 1.4
PTGDR2-201ENST00000332539 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
PTGDR2-201ENST00000332539 FKBP8Q14318 412 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms