RNA–Protein interactions for RNA: ENST00000330914.7

TUBB-206, Transcript of tubulin beta class I, humanhuman

TSL 2 BASIC

Gene TUBB, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-206ENST00000330914 NISCHQ9Y2I1 1504 aa31.31■■■□□ 2.6
TUBB-206ENST00000330914 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
TUBB-206ENST00000330914 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
TUBB-206ENST00000330914 SUPT5HO00267 1087 aaKnown RBP27.24■■□□□ 1.95
TUBB-206ENST00000330914 HRCP23327 699 aa26.91■■□□□ 1.9
TUBB-206ENST00000330914 MYO15BQ96JP2 1530 aa26.78■■□□□ 1.88
TUBB-206ENST00000330914 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
TUBB-206ENST00000330914 ABCC9O60706 1549 aa26.66■■□□□ 1.86
TUBB-206ENST00000330914 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
TUBB-206ENST00000330914 PCGF6Q9BYE7 350 aa26.6■■□□□ 1.85
TUBB-206ENST00000330914 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
TUBB-206ENST00000330914 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.83
TUBB-206ENST00000330914 LOC105371045A0A1W2PR82 267 aa26.06■■□□□ 1.76
TUBB-206ENST00000330914 DCAF1Q9Y4B6 1507 aa26.03■■□□□ 1.76
TUBB-206ENST00000330914 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
TUBB-206ENST00000330914 NACADO15069 1562 aa25.57■■□□□ 1.68
TUBB-206ENST00000330914 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
TUBB-206ENST00000330914 ZEB1P37275 1124 aaPredicted RBP25.4■■□□□ 1.66
TUBB-206ENST00000330914 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
TUBB-206ENST00000330914 PELP1Q8IZL8 1130 aaKnown RBP25.29■■□□□ 1.64
TUBB-206ENST00000330914 SCAF1Q9H7N4 1312 aaKnown RBP25.29■■□□□ 1.64
TUBB-206ENST00000330914 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
TUBB-206ENST00000330914 FAM9AQ8IZU1 332 aaPredicted RBP25.2■■□□□ 1.62
TUBB-206ENST00000330914 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.62
TUBB-206ENST00000330914 PABPN1Q86U42 306 aaKnown RBP eCLIP25.13■■□□□ 1.61
TUBB-206ENST00000330914 EHMT2Q96KQ7 1210 aa25.1■■□□□ 1.61
TUBB-206ENST00000330914 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
TUBB-206ENST00000330914 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
TUBB-206ENST00000330914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.8■■□□□ 1.56
TUBB-206ENST00000330914 ACIN1Q9UKV3 1341 aaKnown RBP24.75■■□□□ 1.55
TUBB-206ENST00000330914 NEUROD1Q13562 356 aa24.74■■□□□ 1.55
TUBB-206ENST00000330914 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
TUBB-206ENST00000330914 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
TUBB-206ENST00000330914 GTF3C3Q9Y5Q9 886 aa24.56■■□□□ 1.52
TUBB-206ENST00000330914 DIEXFQ68CQ4 756 aaKnown RBP24.55■■□□□ 1.52
TUBB-206ENST00000330914 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
TUBB-206ENST00000330914 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.5
TUBB-206ENST00000330914 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
TUBB-206ENST00000330914 WIZO95785 1651 aa24.38■■□□□ 1.49
TUBB-206ENST00000330914 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
TUBB-206ENST00000330914 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
TUBB-206ENST00000330914 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
TUBB-206ENST00000330914 ZNF316A6NFI3 1004 aaPredicted RBP24.15■■□□□ 1.46
TUBB-206ENST00000330914 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.46
TUBB-206ENST00000330914 MYT1Q01538 1121 aa24.14■■□□□ 1.45
TUBB-206ENST00000330914 YTHDC1Q96MU7 727 aaKnown RBP24.14■■□□□ 1.45
TUBB-206ENST00000330914 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
TUBB-206ENST00000330914 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
TUBB-206ENST00000330914 SMARCA4P51532 1647 aa24.12■■□□□ 1.45
TUBB-206ENST00000330914 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.44
TUBB-206ENST00000330914 SOGA1O94964 1423 aa24.03■■□□□ 1.44
TUBB-206ENST00000330914 CC2D2AQ9P2K1 1620 aa24■■□□□ 1.43
TUBB-206ENST00000330914 TNIKQ9UKE5 1360 aa24■■□□□ 1.43
TUBB-206ENST00000330914 MIER1Q8N108 512 aa23.98■■□□□ 1.43
TUBB-206ENST00000330914 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
TUBB-206ENST00000330914 RUSC2Q8N2Y8 1516 aa23.91■■□□□ 1.42
TUBB-206ENST00000330914 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
TUBB-206ENST00000330914 HNRNPUL2Q1KMD3 747 aaKnown RBP23.86■■□□□ 1.41
TUBB-206ENST00000330914 TOP2AP11388 1531 aaKnown RBP23.86■■□□□ 1.41
TUBB-206ENST00000330914 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
TUBB-206ENST00000330914 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
TUBB-206ENST00000330914 EEA1Q15075 1411 aa23.76■■□□□ 1.39
TUBB-206ENST00000330914 GOLGA3Q08378 1498 aa23.74■■□□□ 1.39
TUBB-206ENST00000330914 BAZ1BQ9UIG0 1483 aaKnown RBP23.71■■□□□ 1.39
TUBB-206ENST00000330914 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
TUBB-206ENST00000330914 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
TUBB-206ENST00000330914 CLIP1P30622 1438 aa23.56■■□□□ 1.36
TUBB-206ENST00000330914 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
TUBB-206ENST00000330914 CEP164Q9UPV0 1460 aa23.52■■□□□ 1.36
TUBB-206ENST00000330914 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
TUBB-206ENST00000330914 RANGAP1P46060 587 aaPredicted RBP23.49■■□□□ 1.35
TUBB-206ENST00000330914 APLP2Q06481 763 aa23.49■■□□□ 1.35
TUBB-206ENST00000330914 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
TUBB-206ENST00000330914 KIF21BO75037 1637 aa23.45■■□□□ 1.34
TUBB-206ENST00000330914 SYNJ1O43426 1573 aa23.42■■□□□ 1.34
TUBB-206ENST00000330914 RAPGEF2Q9Y4G8 1499 aa23.38■■□□□ 1.33
TUBB-206ENST00000330914 DHX57Q6P158 1386 aaKnown RBP23.36■■□□□ 1.33
TUBB-206ENST00000330914 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
TUBB-206ENST00000330914 NESP48681 1621 aa23.26■■□□□ 1.31
TUBB-206ENST00000330914 TSHZ2Q9NRE2 1034 aa23.25■■□□□ 1.31
TUBB-206ENST00000330914 KANK4Q5T7N3 995 aaPredicted RBP23.2■■□□□ 1.3
TUBB-206ENST00000330914 KCNH8Q96L42 1107 aa23.16■■□□□ 1.3
TUBB-206ENST00000330914 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
TUBB-206ENST00000330914 ANP32EQ9BTT0 268 aa23.09■■□□□ 1.29
TUBB-206ENST00000330914 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
TUBB-206ENST00000330914 RRBP1Q9P2E9 1410 aaKnown RBP23.03■■□□□ 1.28
TUBB-206ENST00000330914 ITGAEP38570 1179 aa23.03■■□□□ 1.28
TUBB-206ENST00000330914 BCANQ96GW7 911 aa23.03■■□□□ 1.28
TUBB-206ENST00000330914 CFTRP13569 1480 aa23.01■■□□□ 1.27
TUBB-206ENST00000330914 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
TUBB-206ENST00000330914 PRXQ9BXM0 1461 aa22.97■■□□□ 1.27
TUBB-206ENST00000330914 CUX2O14529 1486 aa22.96■■□□□ 1.27
TUBB-206ENST00000330914 CCNB3Q8WWL7 1395 aa22.95■■□□□ 1.26
TUBB-206ENST00000330914 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
TUBB-206ENST00000330914 FKBP8Q14318 412 aa22.93■■□□□ 1.26
TUBB-206ENST00000330914 LAMC3Q9Y6N6 1575 aa22.92■■□□□ 1.26
TUBB-206ENST00000330914 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
TUBB-206ENST00000330914 DDX10Q13206 875 aaKnown RBP22.88■■□□□ 1.25
TUBB-206ENST00000330914 RAB3GAP2Q9H2M9 1393 aa22.88■■□□□ 1.25
TUBB-206ENST00000330914 FANCD2Q9BXW9 1451 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms