RNA–Protein interactions for RNA: ENST00000330912.6

TREX2-201, Transcript of three prime repair exonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TREX2, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2-201ENST00000330912 NISCHQ9Y2I1 1504 aa40.14■■■■■ 4.02
TREX2-201ENST00000330912 CCDC180Q9P1Z9 1646 aa34.75■■■■□ 3.15
TREX2-201ENST00000330912 ZCCHC6Q5VYS8 1495 aaKnown RBP33.75■■■□□ 2.99
TREX2-201ENST00000330912 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
TREX2-201ENST00000330912 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
TREX2-201ENST00000330912 DCAF1Q9Y4B6 1507 aa33.04■■■□□ 2.88
TREX2-201ENST00000330912 ABCC9O60706 1549 aa32.92■■■□□ 2.86
TREX2-201ENST00000330912 MYO15BQ96JP2 1530 aa32.52■■■□□ 2.8
TREX2-201ENST00000330912 NACADO15069 1562 aa32.33■■■□□ 2.77
TREX2-201ENST00000330912 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
TREX2-201ENST00000330912 RB1CC1Q8TDY2 1594 aa32.04■■■□□ 2.72
TREX2-201ENST00000330912 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
TREX2-201ENST00000330912 UNC13AQ9UPW8 1703 aa31.52■■■□□ 2.64
TREX2-201ENST00000330912 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
TREX2-201ENST00000330912 RSF1Q96T23 1441 aaPredicted RBP31.29■■■□□ 2.6
TREX2-201ENST00000330912 PABPN1Q86U42 306 aaKnown RBP eCLIP31.18■■■□□ 2.58
TREX2-201ENST00000330912 BICRAQ9NZM4 1560 aa31.17■■■□□ 2.58
TREX2-201ENST00000330912 MROH2BQ7Z745 1585 aa31.1■■■□□ 2.57
TREX2-201ENST00000330912 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
TREX2-201ENST00000330912 WIZO95785 1651 aa30.88■■■□□ 2.53
TREX2-201ENST00000330912 SMARCA4P51532 1647 aa30.81■■■□□ 2.52
TREX2-201ENST00000330912 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.5
TREX2-201ENST00000330912 TOP2AP11388 1531 aaKnown RBP30.43■■■□□ 2.46
TREX2-201ENST00000330912 PEG3Q9GZU2 1588 aa30.34■■■□□ 2.45
TREX2-201ENST00000330912 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.43
TREX2-201ENST00000330912 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
TREX2-201ENST00000330912 SMARCA2P51531 1590 aa30.22■■■□□ 2.43
TREX2-201ENST00000330912 EIF4G1Q04637 1599 aaKnown RBP30.2■■■□□ 2.42
TREX2-201ENST00000330912 BAZ1BQ9UIG0 1483 aaKnown RBP30.1■■■□□ 2.41
TREX2-201ENST00000330912 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
TREX2-201ENST00000330912 NCAPD3P42695 1498 aa29.9■■■□□ 2.38
TREX2-201ENST00000330912 HMGXB3Q12766 1538 aa29.84■■■□□ 2.37
TREX2-201ENST00000330912 ABCC8Q09428 1581 aa29.75■■■□□ 2.35
TREX2-201ENST00000330912 CC2D2AQ9P2K1 1620 aa29.72■■■□□ 2.35
TREX2-201ENST00000330912 LOC105371045A0A1W2PR82 267 aa29.66■■■□□ 2.34
TREX2-201ENST00000330912 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
TREX2-201ENST00000330912 WRNQ14191 1432 aaPredicted RBP eCLIP29.42■■■□□ 2.3
TREX2-201ENST00000330912 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
TREX2-201ENST00000330912 CFTRP13569 1480 aa29.33■■■□□ 2.29
TREX2-201ENST00000330912 EHMT2Q96KQ7 1210 aa29.29■■■□□ 2.28
TREX2-201ENST00000330912 SOGA1O94964 1423 aa29.24■■■□□ 2.27
TREX2-201ENST00000330912 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.27
TREX2-201ENST00000330912 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
TREX2-201ENST00000330912 DNAJC5BQ9UF47 199 aa29.15■■■□□ 2.26
TREX2-201ENST00000330912 PRDM2Q13029 1718 aa29.12■■■□□ 2.25
TREX2-201ENST00000330912 TOP2BQ02880 1626 aa29.11■■■□□ 2.25
TREX2-201ENST00000330912 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
TREX2-201ENST00000330912 CUX1P39880 1505 aa29.04■■■□□ 2.24
TREX2-201ENST00000330912 NESP48681 1621 aa29■■■□□ 2.23
TREX2-201ENST00000330912 EEA1Q15075 1411 aa28.99■■■□□ 2.23
TREX2-201ENST00000330912 CSRNP3Q8WYN3 585 aa28.97■■■□□ 2.23
TREX2-201ENST00000330912 FANCD2Q9BXW9 1451 aa28.9■■■□□ 2.22
TREX2-201ENST00000330912 LAMC3Q9Y6N6 1575 aa28.81■■■□□ 2.2
TREX2-201ENST00000330912 GOLGA3Q08378 1498 aa28.7■■■□□ 2.18
TREX2-201ENST00000330912 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
TREX2-201ENST00000330912 FGD5Q6ZNL6 1462 aa28.68■■■□□ 2.18
TREX2-201ENST00000330912 CEP164Q9UPV0 1460 aa28.67■■■□□ 2.18
TREX2-201ENST00000330912 KIF21BO75037 1637 aa28.66■■■□□ 2.18
TREX2-201ENST00000330912 TNIKQ9UKE5 1360 aa28.66■■■□□ 2.18
TREX2-201ENST00000330912 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
TREX2-201ENST00000330912 KIF27Q86VH2 1401 aa28.62■■■□□ 2.17
TREX2-201ENST00000330912 PDS5BQ9NTI5 1447 aa28.62■■■□□ 2.17
TREX2-201ENST00000330912 TOPBP1Q92547 1522 aa28.61■■■□□ 2.17
TREX2-201ENST00000330912 RAPGEF2Q9Y4G8 1499 aa28.6■■■□□ 2.17
TREX2-201ENST00000330912 CEP162Q5TB80 1403 aa28.6■■■□□ 2.17
TREX2-201ENST00000330912 KIF21AQ7Z4S6 1674 aa28.57■■■□□ 2.16
TREX2-201ENST00000330912 HRCP23327 699 aa28.55■■■□□ 2.16
TREX2-201ENST00000330912 CUX2O14529 1486 aa28.55■■■□□ 2.16
TREX2-201ENST00000330912 URB2Q14146 1524 aaKnown RBP28.55■■■□□ 2.16
TREX2-201ENST00000330912 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
TREX2-201ENST00000330912 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.16
TREX2-201ENST00000330912 PRXQ9BXM0 1461 aa28.5■■■□□ 2.15
TREX2-201ENST00000330912 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
TREX2-201ENST00000330912 ERICH3Q5RHP9 1530 aa28.41■■■□□ 2.14
TREX2-201ENST00000330912 IGF1RP08069 1367 aa28.41■■■□□ 2.14
TREX2-201ENST00000330912 ABCA10Q8WWZ4 1543 aa28.37■■■□□ 2.13
TREX2-201ENST00000330912 PPARGC1BQ86YN6 1023 aaKnown RBP28.33■■■□□ 2.13
TREX2-201ENST00000330912 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
TREX2-201ENST00000330912 TRIM26Q12899 539 aaPredicted RBP28.31■■■□□ 2.12
TREX2-201ENST00000330912 CLIP1P30622 1438 aa28.3■■■□□ 2.12
TREX2-201ENST00000330912 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
TREX2-201ENST00000330912 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
TREX2-201ENST00000330912 MRC2Q9UBG0 1479 aa28.24■■■□□ 2.11
TREX2-201ENST00000330912 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.11
TREX2-201ENST00000330912 TARBP1Q13395 1621 aaKnown RBP28.15■■■□□ 2.1
TREX2-201ENST00000330912 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
TREX2-201ENST00000330912 ABCA5Q8WWZ7 1642 aa28.13■■■□□ 2.09
TREX2-201ENST00000330912 GAPVD1Q14C86 1478 aa28.09■■■□□ 2.09
TREX2-201ENST00000330912 WDR62O43379 1518 aa28.08■■■□□ 2.09
TREX2-201ENST00000330912 TTBK1Q5TCY1 1321 aaPredicted RBP28.06■■■□□ 2.08
TREX2-201ENST00000330912 VPS8Q8N3P4 1428 aa28.06■■■□□ 2.08
TREX2-201ENST00000330912 CUL7Q14999 1698 aa28.04■■■□□ 2.08
TREX2-201ENST00000330912 ARAP1Q96P48 1450 aa28.01■■■□□ 2.07
TREX2-201ENST00000330912 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.071e-6■■■■□ 21.8
TREX2-201ENST00000330912 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
TREX2-201ENST00000330912 ARHGAP35Q9NRY4 1499 aa27.96■■■□□ 2.07
TREX2-201ENST00000330912 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
TREX2-201ENST00000330912 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
TREX2-201ENST00000330912 PBRM1Q86U86 1689 aa27.89■■■□□ 2.06
TREX2-201ENST00000330912 CTTNBP2Q8WZ74 1663 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms