RNA–Protein interactions for RNA: ENST00000330258.3

AMER1-201, Transcript of APC membrane recruitment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMER1, Length 8,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMER1-201ENST00000330258 NISCHQ9Y2I1 1504 aa16.92■□□□□ 0.3
AMER1-201ENST00000330258 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
AMER1-201ENST00000330258 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
AMER1-201ENST00000330258 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
AMER1-201ENST00000330258 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
AMER1-201ENST00000330258 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
AMER1-201ENST00000330258 PCGF6Q9BYE7 350 aa15.07■□□□□ 0
AMER1-201ENST00000330258 MYT1Q01538 1121 aa14.99□□□□□ -0.01
AMER1-201ENST00000330258 APLP2Q06481 763 aa14.99□□□□□ -0.01
AMER1-201ENST00000330258 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
AMER1-201ENST00000330258 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
AMER1-201ENST00000330258 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
AMER1-201ENST00000330258 CCER1Q8TC90 406 aaPredicted RBP14.73□□□□□ -0.05
AMER1-201ENST00000330258 TRIM26Q12899 539 aaPredicted RBP14.68□□□□□ -0.06
AMER1-201ENST00000330258 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
AMER1-201ENST00000330258 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
AMER1-201ENST00000330258 HRCP23327 699 aa14.64□□□□□ -0.07
AMER1-201ENST00000330258 ERICH6Q7L0X2 663 aa14.51□□□□□ -0.09
AMER1-201ENST00000330258 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
AMER1-201ENST00000330258 NEFLP07196 543 aa14.44□□□□□ -0.1
AMER1-201ENST00000330258 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
AMER1-201ENST00000330258 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
AMER1-201ENST00000330258 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
AMER1-201ENST00000330258 RANGAP1P46060 587 aaPredicted RBP14.17□□□□□ -0.14
AMER1-201ENST00000330258 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
AMER1-201ENST00000330258 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
AMER1-201ENST00000330258 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
AMER1-201ENST00000330258 DIEXFQ68CQ4 756 aaKnown RBP14.12□□□□□ -0.15
AMER1-201ENST00000330258 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
AMER1-201ENST00000330258 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
AMER1-201ENST00000330258 SCRIBQ14160 1630 aa14.02□□□□□ -0.16
AMER1-201ENST00000330258 DAXXQ9UER7 740 aaPredicted RBP13.93□□□□□ -0.18
AMER1-201ENST00000330258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
AMER1-201ENST00000330258 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
AMER1-201ENST00000330258 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
AMER1-201ENST00000330258 GTF3C3Q9Y5Q9 886 aa13.8□□□□□ -0.2
AMER1-201ENST00000330258 ITGAEP38570 1179 aa13.79□□□□□ -0.2
AMER1-201ENST00000330258 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
AMER1-201ENST00000330258 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
AMER1-201ENST00000330258 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
AMER1-201ENST00000330258 ABCC9O60706 1549 aa13.73□□□□□ -0.21
AMER1-201ENST00000330258 ANP32CO43423 234 aa13.67□□□□□ -0.22
AMER1-201ENST00000330258 NACADO15069 1562 aa13.65□□□□□ -0.22
AMER1-201ENST00000330258 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
AMER1-201ENST00000330258 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
AMER1-201ENST00000330258 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
AMER1-201ENST00000330258 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
AMER1-201ENST00000330258 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
AMER1-201ENST00000330258 EEA1Q15075 1411 aa13.52□□□□□ -0.25
AMER1-201ENST00000330258 MYT1LQ9UL68 1186 aa13.51□□□□□ -0.25
AMER1-201ENST00000330258 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
AMER1-201ENST00000330258 NEUROD1Q13562 356 aa13.49□□□□□ -0.25
AMER1-201ENST00000330258 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
AMER1-201ENST00000330258 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
AMER1-201ENST00000330258 TRIM52Q96A61 297 aa13.43□□□□□ -0.26
AMER1-201ENST00000330258 GOLGA3Q08378 1498 aa13.42□□□□□ -0.26
AMER1-201ENST00000330258 BCANQ96GW7 911 aa13.38□□□□□ -0.27
AMER1-201ENST00000330258 TONSLQ96HA7 1378 aa13.37□□□□□ -0.27
AMER1-201ENST00000330258 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
AMER1-201ENST00000330258 CLIP1P30622 1438 aa13.33□□□□□ -0.28
AMER1-201ENST00000330258 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
AMER1-201ENST00000330258 CNGB1Q14028 1251 aaPredicted RBP13.33□□□□□ -0.28
AMER1-201ENST00000330258 RSF1Q96T23 1441 aaPredicted RBP13.33□□□□□ -0.28
AMER1-201ENST00000330258 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
AMER1-201ENST00000330258 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
AMER1-201ENST00000330258 WIZO95785 1651 aa13.28□□□□□ -0.28
AMER1-201ENST00000330258 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
AMER1-201ENST00000330258 FKBP8Q14318 412 aa13.26□□□□□ -0.29
AMER1-201ENST00000330258 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
AMER1-201ENST00000330258 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.3
AMER1-201ENST00000330258 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
AMER1-201ENST00000330258 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
AMER1-201ENST00000330258 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
AMER1-201ENST00000330258 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
AMER1-201ENST00000330258 WRNQ14191 1432 aaPredicted RBP eCLIP13.16□□□□□ -0.3
AMER1-201ENST00000330258 MIER1Q8N108 512 aa13.15□□□□□ -0.3
AMER1-201ENST00000330258 DDX10Q13206 875 aaKnown RBP13.14□□□□□ -0.31
AMER1-201ENST00000330258 UPF2Q9HAU5 1272 aaKnown RBP13.14□□□□□ -0.31
AMER1-201ENST00000330258 NEFMP07197 916 aa13.12□□□□□ -0.31
AMER1-201ENST00000330258 ANP32BQ92688 251 aaKnown RBP13.12□□□□□ -0.31
AMER1-201ENST00000330258 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
AMER1-201ENST00000330258 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
AMER1-201ENST00000330258 GLIPR1L2Q4G1C9 344 aa13.1□□□□□ -0.31
AMER1-201ENST00000330258 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
AMER1-201ENST00000330258 TOP2AP11388 1531 aaKnown RBP13.1□□□□□ -0.31
AMER1-201ENST00000330258 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.31
AMER1-201ENST00000330258 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
AMER1-201ENST00000330258 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
AMER1-201ENST00000330258 SMARCA4P51532 1647 aa13.07□□□□□ -0.32
AMER1-201ENST00000330258 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
AMER1-201ENST00000330258 TMC1Q8TDI8 760 aa13.07□□□□□ -0.32
AMER1-201ENST00000330258 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.06□□□□□ -0.32
AMER1-201ENST00000330258 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
AMER1-201ENST00000330258 FAM9BQ8IZU0 186 aa13.03□□□□□ -0.32
AMER1-201ENST00000330258 EIF4G2P78344 907 aaKnown RBP eCLIP13.01□□□□□ -0.33
AMER1-201ENST00000330258 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
AMER1-201ENST00000330258 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
AMER1-201ENST00000330258 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
AMER1-201ENST00000330258 MROH2BQ7Z745 1585 aa12.99□□□□□ -0.33
AMER1-201ENST00000330258 ANP32EQ9BTT0 268 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms