RNA–Protein interactions for RNA: ENST00000329697.10

ACSM2B-201, Transcript of acyl-CoA synthetase medium chain family member 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSM2B, Length 2,935 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM2B-201ENST00000329697 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
ACSM2B-201ENST00000329697 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
ACSM2B-201ENST00000329697 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
ACSM2B-201ENST00000329697 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
ACSM2B-201ENST00000329697 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
ACSM2B-201ENST00000329697 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
ACSM2B-201ENST00000329697 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
ACSM2B-201ENST00000329697 ABCC9O60706 1549 aa22.38■■□□□ 1.17
ACSM2B-201ENST00000329697 NACADO15069 1562 aa22.17■■□□□ 1.14
ACSM2B-201ENST00000329697 PELP1Q8IZL8 1130 aaKnown RBP22.03■■□□□ 1.12
ACSM2B-201ENST00000329697 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
ACSM2B-201ENST00000329697 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
ACSM2B-201ENST00000329697 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
ACSM2B-201ENST00000329697 HRCP23327 699 aa21.68■■□□□ 1.06
ACSM2B-201ENST00000329697 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
ACSM2B-201ENST00000329697 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
ACSM2B-201ENST00000329697 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
ACSM2B-201ENST00000329697 MYT1Q01538 1121 aa21.39■■□□□ 1.01
ACSM2B-201ENST00000329697 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
ACSM2B-201ENST00000329697 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
ACSM2B-201ENST00000329697 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
ACSM2B-201ENST00000329697 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
ACSM2B-201ENST00000329697 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
ACSM2B-201ENST00000329697 WIZO95785 1651 aa21.13■□□□□ 0.97
ACSM2B-201ENST00000329697 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
ACSM2B-201ENST00000329697 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
ACSM2B-201ENST00000329697 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
ACSM2B-201ENST00000329697 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
ACSM2B-201ENST00000329697 TOP2AP11388 1531 aaKnown RBP20.89■□□□□ 0.93
ACSM2B-201ENST00000329697 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
ACSM2B-201ENST00000329697 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
ACSM2B-201ENST00000329697 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
ACSM2B-201ENST00000329697 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
ACSM2B-201ENST00000329697 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
ACSM2B-201ENST00000329697 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
ACSM2B-201ENST00000329697 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
ACSM2B-201ENST00000329697 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
ACSM2B-201ENST00000329697 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
ACSM2B-201ENST00000329697 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
ACSM2B-201ENST00000329697 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
ACSM2B-201ENST00000329697 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
ACSM2B-201ENST00000329697 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
ACSM2B-201ENST00000329697 ACIN1Q9UKV3 1341 aaKnown RBP20.21■□□□□ 0.83
ACSM2B-201ENST00000329697 NEUROD1Q13562 356 aa20.15■□□□□ 0.82
ACSM2B-201ENST00000329697 GTF3C3Q9Y5Q9 886 aa20.15■□□□□ 0.82
ACSM2B-201ENST00000329697 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
ACSM2B-201ENST00000329697 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
ACSM2B-201ENST00000329697 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
ACSM2B-201ENST00000329697 CFTRP13569 1480 aa20.09■□□□□ 0.81
ACSM2B-201ENST00000329697 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
ACSM2B-201ENST00000329697 BCL11AQ9H165 835 aa20.01■□□□□ 0.79
ACSM2B-201ENST00000329697 SOGA1O94964 1423 aa20■□□□□ 0.79
ACSM2B-201ENST00000329697 PRDM2Q13029 1718 aa20■□□□□ 0.79
ACSM2B-201ENST00000329697 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
ACSM2B-201ENST00000329697 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
ACSM2B-201ENST00000329697 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
ACSM2B-201ENST00000329697 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
ACSM2B-201ENST00000329697 EEA1Q15075 1411 aa19.93■□□□□ 0.78
ACSM2B-201ENST00000329697 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
ACSM2B-201ENST00000329697 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
ACSM2B-201ENST00000329697 CUX1P39880 1505 aa19.89■□□□□ 0.77
ACSM2B-201ENST00000329697 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
ACSM2B-201ENST00000329697 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
ACSM2B-201ENST00000329697 PRKCSHP14314 528 aaPredicted RBP19.78■□□□□ 0.76
ACSM2B-201ENST00000329697 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
ACSM2B-201ENST00000329697 NESP48681 1621 aa19.75■□□□□ 0.75
ACSM2B-201ENST00000329697 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
ACSM2B-201ENST00000329697 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
ACSM2B-201ENST00000329697 KIF21BO75037 1637 aa19.72■□□□□ 0.75
ACSM2B-201ENST00000329697 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
ACSM2B-201ENST00000329697 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
ACSM2B-201ENST00000329697 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
ACSM2B-201ENST00000329697 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
ACSM2B-201ENST00000329697 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
ACSM2B-201ENST00000329697 CEP162Q5TB80 1403 aa19.6■□□□□ 0.73
ACSM2B-201ENST00000329697 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
ACSM2B-201ENST00000329697 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.72
ACSM2B-201ENST00000329697 PRXQ9BXM0 1461 aa19.57■□□□□ 0.72
ACSM2B-201ENST00000329697 TOPBP1Q92547 1522 aa19.57■□□□□ 0.72
ACSM2B-201ENST00000329697 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
ACSM2B-201ENST00000329697 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
ACSM2B-201ENST00000329697 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
ACSM2B-201ENST00000329697 URB2Q14146 1524 aaKnown RBP19.52■□□□□ 0.72
ACSM2B-201ENST00000329697 CUX2O14529 1486 aa19.51■□□□□ 0.71
ACSM2B-201ENST00000329697 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
ACSM2B-201ENST00000329697 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
ACSM2B-201ENST00000329697 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
ACSM2B-201ENST00000329697 ANP32EQ9BTT0 268 aa19.48■□□□□ 0.71
ACSM2B-201ENST00000329697 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
ACSM2B-201ENST00000329697 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
ACSM2B-201ENST00000329697 IGF1RP08069 1367 aa19.43■□□□□ 0.7
ACSM2B-201ENST00000329697 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
ACSM2B-201ENST00000329697 CLIP1P30622 1438 aa19.39■□□□□ 0.69
ACSM2B-201ENST00000329697 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
ACSM2B-201ENST00000329697 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
ACSM2B-201ENST00000329697 CARMIL1Q5VZK9 1371 aa19.3■□□□□ 0.68
ACSM2B-201ENST00000329697 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
ACSM2B-201ENST00000329697 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
ACSM2B-201ENST00000329697 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
ACSM2B-201ENST00000329697 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms