RNA–Protein interactions for RNA: ENST00000329235.6

AP1S2-201, Transcript of adaptor related protein complex 1 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP1S2, Length 2,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2-201ENST00000329235 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
AP1S2-201ENST00000329235 CCDC180Q9P1Z9 1646 aa33.54■■■□□ 2.96
AP1S2-201ENST00000329235 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
AP1S2-201ENST00000329235 DCAF1Q9Y4B6 1507 aa31.94■■■□□ 2.7
AP1S2-201ENST00000329235 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
AP1S2-201ENST00000329235 DCAF8L2P0C7V8 631 aa31.47■■■□□ 2.63
AP1S2-201ENST00000329235 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
AP1S2-201ENST00000329235 ABCC9O60706 1549 aa31.28■■■□□ 2.6
AP1S2-201ENST00000329235 NACADO15069 1562 aa31.15■■■□□ 2.58
AP1S2-201ENST00000329235 RB1CC1Q8TDY2 1594 aa30.8■■■□□ 2.52
AP1S2-201ENST00000329235 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
AP1S2-201ENST00000329235 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.45
AP1S2-201ENST00000329235 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
AP1S2-201ENST00000329235 RSF1Q96T23 1441 aaPredicted RBP29.93■■■□□ 2.38
AP1S2-201ENST00000329235 BICRAQ9NZM4 1560 aa29.83■■■□□ 2.37
AP1S2-201ENST00000329235 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
AP1S2-201ENST00000329235 BAZ1AQ9NRL2 1556 aaPredicted RBP29.74■■■□□ 2.35
AP1S2-201ENST00000329235 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
AP1S2-201ENST00000329235 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
AP1S2-201ENST00000329235 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
AP1S2-201ENST00000329235 WIZO95785 1651 aa29.47■■■□□ 2.31
AP1S2-201ENST00000329235 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
AP1S2-201ENST00000329235 CHIC1Q5VXU3 224 aa29.25■■■□□ 2.27
AP1S2-201ENST00000329235 TOP2AP11388 1531 aaKnown RBP29.24■■■□□ 2.27
AP1S2-201ENST00000329235 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
AP1S2-201ENST00000329235 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
AP1S2-201ENST00000329235 EIF4G1Q04637 1599 aaKnown RBP28.9■■■□□ 2.22
AP1S2-201ENST00000329235 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
AP1S2-201ENST00000329235 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
AP1S2-201ENST00000329235 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
AP1S2-201ENST00000329235 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
AP1S2-201ENST00000329235 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
AP1S2-201ENST00000329235 CC2D2AQ9P2K1 1620 aa28.39■■■□□ 2.14
AP1S2-201ENST00000329235 ABCC8Q09428 1581 aa28.32■■■□□ 2.12
AP1S2-201ENST00000329235 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
AP1S2-201ENST00000329235 CFTRP13569 1480 aa28.14■■■□□ 2.1
AP1S2-201ENST00000329235 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
AP1S2-201ENST00000329235 LOC105371045A0A1W2PR82 267 aa28.04■■■□□ 2.08
AP1S2-201ENST00000329235 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
AP1S2-201ENST00000329235 EEA1Q15075 1411 aa27.99■■■□□ 2.07
AP1S2-201ENST00000329235 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
AP1S2-201ENST00000329235 CADPSQ9ULU8 1353 aa27.96■■■□□ 2.07
AP1S2-201ENST00000329235 BIVM-ERCC5R4GMW8 1640 aa27.95■■■□□ 2.06
AP1S2-201ENST00000329235 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
AP1S2-201ENST00000329235 SOGA1O94964 1423 aa27.84■■■□□ 2.05
AP1S2-201ENST00000329235 CUX1P39880 1505 aa27.77■■■□□ 2.04
AP1S2-201ENST00000329235 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
AP1S2-201ENST00000329235 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
AP1S2-201ENST00000329235 CSRNP3Q8WYN3 585 aa27.68■■■□□ 2.02
AP1S2-201ENST00000329235 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.02
AP1S2-201ENST00000329235 KIF21BO75037 1637 aa27.6■■■□□ 2.01
AP1S2-201ENST00000329235 NESP48681 1621 aa27.55■■■□□ 2
AP1S2-201ENST00000329235 GOLGA3Q08378 1498 aa27.55■■■□□ 2
AP1S2-201ENST00000329235 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
AP1S2-201ENST00000329235 TNIKQ9UKE5 1360 aa27.51■■■□□ 2
AP1S2-201ENST00000329235 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
AP1S2-201ENST00000329235 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
AP1S2-201ENST00000329235 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
AP1S2-201ENST00000329235 EHMT2Q96KQ7 1210 aa27.44■■□□□ 1.98
AP1S2-201ENST00000329235 FGD5Q6ZNL6 1462 aa27.42■■□□□ 1.98
AP1S2-201ENST00000329235 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
AP1S2-201ENST00000329235 TOPBP1Q92547 1522 aa27.39■■□□□ 1.97
AP1S2-201ENST00000329235 ERICH3Q5RHP9 1530 aa27.38■■□□□ 1.97
AP1S2-201ENST00000329235 CEP162Q5TB80 1403 aa27.35■■□□□ 1.97
AP1S2-201ENST00000329235 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
AP1S2-201ENST00000329235 KIF21AQ7Z4S6 1674 aa27.29■■□□□ 1.96
AP1S2-201ENST00000329235 RAPGEF2Q9Y4G8 1499 aa27.29■■□□□ 1.96
AP1S2-201ENST00000329235 UBTFP17480 764 aaKnown RBP27.29■■□□□ 1.96
AP1S2-201ENST00000329235 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
AP1S2-201ENST00000329235 CUX2O14529 1486 aa27.28■■□□□ 1.96
AP1S2-201ENST00000329235 POLA1P09884 1462 aaPredicted RBP27.26■■□□□ 1.95
AP1S2-201ENST00000329235 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
AP1S2-201ENST00000329235 WDR97A6NE52 1622 aa27.15■■□□□ 1.94
AP1S2-201ENST00000329235 IGF1RP08069 1367 aa27.14■■□□□ 1.94
AP1S2-201ENST00000329235 RAD54L2Q9Y4B4 1467 aa27.11■■□□□ 1.93
AP1S2-201ENST00000329235 MRC2Q9UBG0 1479 aa27.09■■□□□ 1.93
AP1S2-201ENST00000329235 TRIM26Q12899 539 aaPredicted RBP27.09■■□□□ 1.93
AP1S2-201ENST00000329235 CLIP1P30622 1438 aa27.08■■□□□ 1.93
AP1S2-201ENST00000329235 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
AP1S2-201ENST00000329235 CUL7Q14999 1698 aa27.01■■□□□ 1.91
AP1S2-201ENST00000329235 CARMIL1Q5VZK9 1371 aa27.01■■□□□ 1.91
AP1S2-201ENST00000329235 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.91
AP1S2-201ENST00000329235 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
AP1S2-201ENST00000329235 WDR62O43379 1518 aa26.96■■□□□ 1.91
AP1S2-201ENST00000329235 VPS8Q8N3P4 1428 aa26.92■■□□□ 1.9
AP1S2-201ENST00000329235 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
AP1S2-201ENST00000329235 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
AP1S2-201ENST00000329235 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
AP1S2-201ENST00000329235 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
AP1S2-201ENST00000329235 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
AP1S2-201ENST00000329235 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
AP1S2-201ENST00000329235 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
AP1S2-201ENST00000329235 ARHGAP35Q9NRY4 1499 aa26.74■■□□□ 1.87
AP1S2-201ENST00000329235 CTTNBP2Q8WZ74 1663 aa26.73■■□□□ 1.87
AP1S2-201ENST00000329235 GRIN2BQ13224 1484 aa26.66■■□□□ 1.86
AP1S2-201ENST00000329235 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.86
AP1S2-201ENST00000329235 EFCAB5A4FU69 1503 aa26.64■■□□□ 1.85
AP1S2-201ENST00000329235 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
AP1S2-201ENST00000329235 FHAD1B1AJZ9 1412 aa26.63■■□□□ 1.85
AP1S2-201ENST00000329235 PPARGC1BQ86YN6 1023 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms