RNA–Protein interactions for RNA: ENST00000328142.3

ATAD1-202, Transcript of ATPase family, AAA domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATAD1, Length 2,939 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD1-202ENST00000328142 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
ATAD1-202ENST00000328142 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
ATAD1-202ENST00000328142 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
ATAD1-202ENST00000328142 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
ATAD1-202ENST00000328142 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
ATAD1-202ENST00000328142 NACADO15069 1562 aa13.19□□□□□ -0.3
ATAD1-202ENST00000328142 ABCC9O60706 1549 aa13.12□□□□□ -0.31
ATAD1-202ENST00000328142 RB1CC1Q8TDY2 1594 aa13.04□□□□□ -0.32
ATAD1-202ENST00000328142 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
ATAD1-202ENST00000328142 SHROOM4Q9ULL8 1493 aa12.74□□□□□ -0.37
ATAD1-202ENST00000328142 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
ATAD1-202ENST00000328142 UNC13AQ9UPW8 1703 aa12.67□□□□□ -0.38
ATAD1-202ENST00000328142 BICRAQ9NZM4 1560 aa12.57□□□□□ -0.4
ATAD1-202ENST00000328142 BAZ1AQ9NRL2 1556 aaPredicted RBP12.44□□□□□ -0.42
ATAD1-202ENST00000328142 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
ATAD1-202ENST00000328142 RSF1Q96T23 1441 aaPredicted RBP12.34□□□□□ -0.43
ATAD1-202ENST00000328142 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
ATAD1-202ENST00000328142 CECR2Q9BXF3 1484 aa12.3□□□□□ -0.44
ATAD1-202ENST00000328142 MROH2BQ7Z745 1585 aa12.28□□□□□ -0.44
ATAD1-202ENST00000328142 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
ATAD1-202ENST00000328142 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
ATAD1-202ENST00000328142 EIF4G1Q04637 1599 aaKnown RBP12.2□□□□□ -0.46
ATAD1-202ENST00000328142 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
ATAD1-202ENST00000328142 HMGXB3Q12766 1538 aa12.15□□□□□ -0.46
ATAD1-202ENST00000328142 WIZO95785 1651 aa12.15□□□□□ -0.46
ATAD1-202ENST00000328142 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
ATAD1-202ENST00000328142 NCAPD3P42695 1498 aa12.13□□□□□ -0.47
ATAD1-202ENST00000328142 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
ATAD1-202ENST00000328142 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
ATAD1-202ENST00000328142 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
ATAD1-202ENST00000328142 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
ATAD1-202ENST00000328142 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
ATAD1-202ENST00000328142 CFTRP13569 1480 aa11.8□□□□□ -0.52
ATAD1-202ENST00000328142 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
ATAD1-202ENST00000328142 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
ATAD1-202ENST00000328142 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
ATAD1-202ENST00000328142 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
ATAD1-202ENST00000328142 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
ATAD1-202ENST00000328142 TOP2BQ02880 1626 aa11.62□□□□□ -0.55
ATAD1-202ENST00000328142 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
ATAD1-202ENST00000328142 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
ATAD1-202ENST00000328142 EEA1Q15075 1411 aa11.58□□□□□ -0.56
ATAD1-202ENST00000328142 FANCD2Q9BXW9 1451 aa11.57□□□□□ -0.56
ATAD1-202ENST00000328142 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
ATAD1-202ENST00000328142 SYNJ1O43426 1573 aa11.55□□□□□ -0.56
ATAD1-202ENST00000328142 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
ATAD1-202ENST00000328142 CEP164Q9UPV0 1460 aa11.54□□□□□ -0.56
ATAD1-202ENST00000328142 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
ATAD1-202ENST00000328142 CUX1P39880 1505 aa11.52□□□□□ -0.57
ATAD1-202ENST00000328142 NESP48681 1621 aa11.48□□□□□ -0.57
ATAD1-202ENST00000328142 WDR97A6NE52 1622 aa11.46□□□□□ -0.58
ATAD1-202ENST00000328142 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
ATAD1-202ENST00000328142 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
ATAD1-202ENST00000328142 MRC2Q9UBG0 1479 aa11.45□□□□□ -0.58
ATAD1-202ENST00000328142 WDR62O43379 1518 aa11.44□□□□□ -0.58
ATAD1-202ENST00000328142 URB2Q14146 1524 aaKnown RBP11.41□□□□□ -0.58
ATAD1-202ENST00000328142 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.58
ATAD1-202ENST00000328142 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
ATAD1-202ENST00000328142 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
ATAD1-202ENST00000328142 KIF21BO75037 1637 aa11.38□□□□□ -0.59
ATAD1-202ENST00000328142 KIF27Q86VH2 1401 aa11.37□□□□□ -0.59
ATAD1-202ENST00000328142 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
ATAD1-202ENST00000328142 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
ATAD1-202ENST00000328142 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
ATAD1-202ENST00000328142 SOGA1O94964 1423 aa11.33□□□□□ -0.6
ATAD1-202ENST00000328142 IFT140Q96RY7 1462 aa11.33□□□□□ -0.6
ATAD1-202ENST00000328142 TARBP1Q13395 1621 aaKnown RBP11.32□□□□□ -0.6
ATAD1-202ENST00000328142 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
ATAD1-202ENST00000328142 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
ATAD1-202ENST00000328142 PRXQ9BXM0 1461 aa11.3□□□□□ -0.6
ATAD1-202ENST00000328142 CUL7Q14999 1698 aa11.29□□□□□ -0.6
ATAD1-202ENST00000328142 GOLGA3Q08378 1498 aa11.28□□□□□ -0.6
ATAD1-202ENST00000328142 CUX2O14529 1486 aa11.28□□□□□ -0.6
ATAD1-202ENST00000328142 RUSC2Q8N2Y8 1516 aa11.25□□□□□ -0.61
ATAD1-202ENST00000328142 TNIKQ9UKE5 1360 aa11.24□□□□□ -0.61
ATAD1-202ENST00000328142 RAD54L2Q9Y4B4 1467 aa11.22□□□□□ -0.61
ATAD1-202ENST00000328142 IGF1RP08069 1367 aa11.22□□□□□ -0.61
ATAD1-202ENST00000328142 GAPVD1Q14C86 1478 aa11.21□□□□□ -0.61
ATAD1-202ENST00000328142 PBRM1Q86U86 1689 aa11.2□□□□□ -0.62
ATAD1-202ENST00000328142 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
ATAD1-202ENST00000328142 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
ATAD1-202ENST00000328142 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
ATAD1-202ENST00000328142 MAGI1Q96QZ7 1491 aaPredicted RBP11.16□□□□□ -0.62
ATAD1-202ENST00000328142 EIF4G3O43432 1585 aaKnown RBP11.15□□□□□ -0.62
ATAD1-202ENST00000328142 ADAMTS12P58397 1594 aa11.15□□□□□ -0.62
ATAD1-202ENST00000328142 FHAD1B1AJZ9 1412 aa11.15□□□□□ -0.62
ATAD1-202ENST00000328142 FAM9AQ8IZU1 332 aaPredicted RBP11.11□□□□□ -0.63
ATAD1-202ENST00000328142 TDRD9Q8NDG6 1382 aaKnown RBP11.1□□□□□ -0.63
ATAD1-202ENST00000328142 CTTNBP2Q8WZ74 1663 aa11.09□□□□□ -0.63
ATAD1-202ENST00000328142 CEP162Q5TB80 1403 aa11.08□□□□□ -0.64
ATAD1-202ENST00000328142 ZNF608Q9ULD9 1512 aaPredicted RBP11.08□□□□□ -0.64
ATAD1-202ENST00000328142 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
ATAD1-202ENST00000328142 EFCAB5A4FU69 1503 aa11.08□□□□□ -0.64
ATAD1-202ENST00000328142 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
ATAD1-202ENST00000328142 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
ATAD1-202ENST00000328142 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
ATAD1-202ENST00000328142 CLIP1P30622 1438 aa11.03□□□□□ -0.64
ATAD1-202ENST00000328142 GRIN2AQ12879 1464 aa11.03□□□□□ -0.64
ATAD1-202ENST00000328142 UBTFP17480 764 aaKnown RBP11.02□□□□□ -0.64
ATAD1-202ENST00000328142 SAMD9Q5K651 1589 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms