RNA–Protein interactions for RNA: ENST00000323786.9

COG4-201, Transcript of component of oligomeric golgi complex 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COG4, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-201ENST00000323786 NISCHQ9Y2I1 1504 aa23.75■■□□□ 1.39
COG4-201ENST00000323786 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
COG4-201ENST00000323786 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
COG4-201ENST00000323786 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
COG4-201ENST00000323786 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
COG4-201ENST00000323786 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
COG4-201ENST00000323786 ABCC9O60706 1549 aa19.58■□□□□ 0.72
COG4-201ENST00000323786 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
COG4-201ENST00000323786 SCRIBQ14160 1630 aa19.21■□□□□ 0.67
COG4-201ENST00000323786 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
COG4-201ENST00000323786 HRCP23327 699 aa18.94■□□□□ 0.62
COG4-201ENST00000323786 NACADO15069 1562 aa18.92■□□□□ 0.62
COG4-201ENST00000323786 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
COG4-201ENST00000323786 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
COG4-201ENST00000323786 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
COG4-201ENST00000323786 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.591e-7■■■□□ 14.6
COG4-201ENST00000323786 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
COG4-201ENST00000323786 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
COG4-201ENST00000323786 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
COG4-201ENST00000323786 UNC13AQ9UPW8 1703 aa18.56■□□□□ 0.56
COG4-201ENST00000323786 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
COG4-201ENST00000323786 WIZO95785 1651 aa18.43■□□□□ 0.54
COG4-201ENST00000323786 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
COG4-201ENST00000323786 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
COG4-201ENST00000323786 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
COG4-201ENST00000323786 LOC105371045A0A1W2PR82 267 aa18.25■□□□□ 0.51
COG4-201ENST00000323786 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
COG4-201ENST00000323786 FAM9AQ8IZU1 332 aaPredicted RBP18.22■□□□□ 0.51
COG4-201ENST00000323786 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
COG4-201ENST00000323786 PELP1Q8IZL8 1130 aaKnown RBP18.19■□□□□ 0.5
COG4-201ENST00000323786 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
COG4-201ENST00000323786 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
COG4-201ENST00000323786 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
COG4-201ENST00000323786 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
COG4-201ENST00000323786 ABCC8Q09428 1581 aa17.9■□□□□ 0.46
COG4-201ENST00000323786 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
COG4-201ENST00000323786 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
COG4-201ENST00000323786 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
COG4-201ENST00000323786 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
COG4-201ENST00000323786 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
COG4-201ENST00000323786 GTF3C3Q9Y5Q9 886 aa17.65■□□□□ 0.42
COG4-201ENST00000323786 TRIM26Q12899 539 aaPredicted RBP17.64■□□□□ 0.41
COG4-201ENST00000323786 SOGA1O94964 1423 aa17.62■□□□□ 0.41
COG4-201ENST00000323786 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
COG4-201ENST00000323786 ACIN1Q9UKV3 1341 aaKnown RBP17.56■□□□□ 0.4
COG4-201ENST00000323786 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
COG4-201ENST00000323786 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
COG4-201ENST00000323786 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
COG4-201ENST00000323786 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
COG4-201ENST00000323786 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
COG4-201ENST00000323786 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
COG4-201ENST00000323786 RANGAP1P46060 587 aaPredicted RBP17.47■□□□□ 0.39
COG4-201ENST00000323786 HMGXB3Q12766 1538 aa17.46■□□□□ 0.38
COG4-201ENST00000323786 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
COG4-201ENST00000323786 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
COG4-201ENST00000323786 YTHDC1Q96MU7 727 aaKnown RBP17.36■□□□□ 0.37
COG4-201ENST00000323786 MYT1Q01538 1121 aa17.34■□□□□ 0.37
COG4-201ENST00000323786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
COG4-201ENST00000323786 ZEB1P37275 1124 aaPredicted RBP17.29■□□□□ 0.36
COG4-201ENST00000323786 CFTRP13569 1480 aa17.29■□□□□ 0.36
COG4-201ENST00000323786 NESP48681 1621 aa17.28■□□□□ 0.36
COG4-201ENST00000323786 CUX1P39880 1505 aa17.26■□□□□ 0.35
COG4-201ENST00000323786 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
COG4-201ENST00000323786 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
COG4-201ENST00000323786 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
COG4-201ENST00000323786 EEA1Q15075 1411 aa17.18■□□□□ 0.34
COG4-201ENST00000323786 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
COG4-201ENST00000323786 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
COG4-201ENST00000323786 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
COG4-201ENST00000323786 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
COG4-201ENST00000323786 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
COG4-201ENST00000323786 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
COG4-201ENST00000323786 CENPBP07199 599 aaPredicted RBP17.12■□□□□ 0.33
COG4-201ENST00000323786 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
COG4-201ENST00000323786 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
COG4-201ENST00000323786 CUX2O14529 1486 aa17.06■□□□□ 0.32
COG4-201ENST00000323786 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
COG4-201ENST00000323786 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
COG4-201ENST00000323786 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
COG4-201ENST00000323786 KIF27Q86VH2 1401 aa17.03■□□□□ 0.32
COG4-201ENST00000323786 CLIP1P30622 1438 aa17.02■□□□□ 0.32
COG4-201ENST00000323786 KIF21BO75037 1637 aa17.02■□□□□ 0.31
COG4-201ENST00000323786 BCL11AQ9H165 835 aa17■□□□□ 0.31
COG4-201ENST00000323786 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
COG4-201ENST00000323786 IGF1RP08069 1367 aa16.93■□□□□ 0.3
COG4-201ENST00000323786 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
COG4-201ENST00000323786 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
COG4-201ENST00000323786 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
COG4-201ENST00000323786 POLA1P09884 1462 aaPredicted RBP16.9■□□□□ 0.3
COG4-201ENST00000323786 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
COG4-201ENST00000323786 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
COG4-201ENST00000323786 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
COG4-201ENST00000323786 LAMC3Q9Y6N6 1575 aa16.87■□□□□ 0.29
COG4-201ENST00000323786 APLP2Q06481 763 aa16.87■□□□□ 0.29
COG4-201ENST00000323786 MIER1Q8N108 512 aa16.86■□□□□ 0.29
COG4-201ENST00000323786 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
COG4-201ENST00000323786 PDS5BQ9NTI5 1447 aa16.85■□□□□ 0.29
COG4-201ENST00000323786 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
COG4-201ENST00000323786 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
COG4-201ENST00000323786 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms