RNA–Protein interactions for RNA: ENST00000323076.6

LCP1-201, Transcript of lymphocyte cytosolic protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCP1, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-201ENST00000323076 NISCHQ9Y2I1 1504 aa15.04■□□□□ -0
LCP1-201ENST00000323076 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
LCP1-201ENST00000323076 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
LCP1-201ENST00000323076 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
LCP1-201ENST00000323076 ZCCHC6Q5VYS8 1495 aaKnown RBP12.89□□□□□ -0.35
LCP1-201ENST00000323076 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.37
LCP1-201ENST00000323076 MYT1Q01538 1121 aa12.53□□□□□ -0.4
LCP1-201ENST00000323076 UNC13AQ9UPW8 1703 aa12.49□□□□□ -0.41
LCP1-201ENST00000323076 NACADO15069 1562 aa12.36□□□□□ -0.43
LCP1-201ENST00000323076 ABCC9O60706 1549 aa12.33□□□□□ -0.44
LCP1-201ENST00000323076 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
LCP1-201ENST00000323076 PRKCSHP14314 528 aaPredicted RBP12.16□□□□□ -0.46
LCP1-201ENST00000323076 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
LCP1-201ENST00000323076 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
LCP1-201ENST00000323076 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
LCP1-201ENST00000323076 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
LCP1-201ENST00000323076 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
LCP1-201ENST00000323076 APLP2Q06481 763 aa11.81□□□□□ -0.52
LCP1-201ENST00000323076 HRCP23327 699 aa11.8□□□□□ -0.52
LCP1-201ENST00000323076 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
LCP1-201ENST00000323076 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
LCP1-201ENST00000323076 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
LCP1-201ENST00000323076 BCL11AQ9H165 835 aa11.74□□□□□ -0.53
LCP1-201ENST00000323076 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
LCP1-201ENST00000323076 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
LCP1-201ENST00000323076 FAM9AQ8IZU1 332 aaPredicted RBP11.66□□□□□ -0.54
LCP1-201ENST00000323076 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
LCP1-201ENST00000323076 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
LCP1-201ENST00000323076 SMARCA2P51531 1590 aa11.57□□□□□ -0.56
LCP1-201ENST00000323076 PPARGC1BQ86YN6 1023 aaKnown RBP11.56□□□□□ -0.56
LCP1-201ENST00000323076 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
LCP1-201ENST00000323076 HMGXB3Q12766 1538 aa11.47□□□□□ -0.57
LCP1-201ENST00000323076 WIZO95785 1651 aa11.47□□□□□ -0.57
LCP1-201ENST00000323076 MROH2BQ7Z745 1585 aa11.46□□□□□ -0.57
LCP1-201ENST00000323076 CC2D2AQ9P2K1 1620 aa11.46□□□□□ -0.57
LCP1-201ENST00000323076 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
LCP1-201ENST00000323076 BIVM-ERCC5R4GMW8 1640 aa11.36□□□□□ -0.59
LCP1-201ENST00000323076 NCAPD3P42695 1498 aa11.33□□□□□ -0.6
LCP1-201ENST00000323076 CECR2Q9BXF3 1484 aa11.31□□□□□ -0.6
LCP1-201ENST00000323076 WDR97A6NE52 1622 aa11.3□□□□□ -0.6
LCP1-201ENST00000323076 DNAJC5BQ9UF47 199 aa11.29□□□□□ -0.6
LCP1-201ENST00000323076 PABPN1Q86U42 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
LCP1-201ENST00000323076 ATAD2BQ9ULI0 1458 aa11.23□□□□□ -0.61
LCP1-201ENST00000323076 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
LCP1-201ENST00000323076 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
LCP1-201ENST00000323076 CENPBP07199 599 aaPredicted RBP11.19□□□□□ -0.62
LCP1-201ENST00000323076 ACIN1Q9UKV3 1341 aaKnown RBP11.1□□□□□ -0.63
LCP1-201ENST00000323076 LAMC3Q9Y6N6 1575 aa11.08□□□□□ -0.64
LCP1-201ENST00000323076 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
LCP1-201ENST00000323076 NEUROD1Q13562 356 aa11.06□□□□□ -0.64
LCP1-201ENST00000323076 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
LCP1-201ENST00000323076 EIF5BO60841 1220 aaKnown RBP11.06□□□□□ -0.64
LCP1-201ENST00000323076 PCGF6Q9BYE7 350 aa11.03□□□□□ -0.64
LCP1-201ENST00000323076 BAZ1BQ9UIG0 1483 aaKnown RBP11.03□□□□□ -0.64
LCP1-201ENST00000323076 ANP32EQ9BTT0 268 aa11.02□□□□□ -0.64
LCP1-201ENST00000323076 CCDC88BA6NC98 1476 aa11.02□□□□□ -0.65
LCP1-201ENST00000323076 PLEKHG5O94827 1062 aa11□□□□□ -0.65
LCP1-201ENST00000323076 CSRNP3Q8WYN3 585 aa10.99□□□□□ -0.65
LCP1-201ENST00000323076 THOC2Q8NI27 1593 aaKnown RBP10.98□□□□□ -0.65
LCP1-201ENST00000323076 KIF21BO75037 1637 aa10.97□□□□□ -0.65
LCP1-201ENST00000323076 SYNJ1O43426 1573 aa10.96□□□□□ -0.66
LCP1-201ENST00000323076 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
LCP1-201ENST00000323076 CFTRP13569 1480 aa10.93□□□□□ -0.66
LCP1-201ENST00000323076 CUX2O14529 1486 aa10.92□□□□□ -0.66
LCP1-201ENST00000323076 KIF21AQ7Z4S6 1674 aa10.89□□□□□ -0.67
LCP1-201ENST00000323076 WDR62O43379 1518 aa10.88□□□□□ -0.67
LCP1-201ENST00000323076 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
LCP1-201ENST00000323076 UBE2Q2Q8WVN8 375 aa10.87□□□□□ -0.67
LCP1-201ENST00000323076 TARBP1Q13395 1621 aaKnown RBP10.83□□□□□ -0.68
LCP1-201ENST00000323076 CADPSQ9ULU8 1353 aa10.81□□□□□ -0.68
LCP1-201ENST00000323076 ERICH3Q5RHP9 1530 aa10.8□□□□□ -0.68
LCP1-201ENST00000323076 CUX1P39880 1505 aa10.79□□□□□ -0.68
LCP1-201ENST00000323076 PDS5BQ9NTI5 1447 aa10.76□□□□□ -0.69
LCP1-201ENST00000323076 NESP48681 1621 aa10.75□□□□□ -0.69
LCP1-201ENST00000323076 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
LCP1-201ENST00000323076 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
LCP1-201ENST00000323076 DNMBPQ6XZF7 1577 aa10.72□□□□□ -0.69
LCP1-201ENST00000323076 CTTNBP2Q8WZ74 1663 aa10.71□□□□□ -0.69
LCP1-201ENST00000323076 PBRM1Q86U86 1689 aa10.71□□□□□ -0.7
LCP1-201ENST00000323076 ZEB1P37275 1124 aaPredicted RBP10.7□□□□□ -0.7
LCP1-201ENST00000323076 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
LCP1-201ENST00000323076 PODXL2Q9NZ53 605 aa10.69□□□□□ -0.7
LCP1-201ENST00000323076 CUL7Q14999 1698 aa10.68□□□□□ -0.7
LCP1-201ENST00000323076 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
LCP1-201ENST00000323076 CEP164Q9UPV0 1460 aa10.67□□□□□ -0.7
LCP1-201ENST00000323076 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
LCP1-201ENST00000323076 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
LCP1-201ENST00000323076 WRNQ14191 1432 aaPredicted RBP eCLIP10.65□□□□□ -0.7
LCP1-201ENST00000323076 URB2Q14146 1524 aaKnown RBP10.65□□□□□ -0.7
LCP1-201ENST00000323076 PRXQ9BXM0 1461 aa10.64□□□□□ -0.71
LCP1-201ENST00000323076 CFAP43Q8NDM7 1665 aa10.63□□□□□ -0.71
LCP1-201ENST00000323076 EEA1Q15075 1411 aa10.63□□□□□ -0.71
LCP1-201ENST00000323076 PKNOX2Q96KN3 472 aa10.62□□□□□ -0.71
LCP1-201ENST00000323076 CCDC136Q96JN2 1154 aa10.62□□□□□ -0.71
LCP1-201ENST00000323076 ERCC6Q03468 1493 aa10.6□□□□□ -0.71
LCP1-201ENST00000323076 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
LCP1-201ENST00000323076 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
LCP1-201ENST00000323076 CHIC1Q5VXU3 224 aa10.56□□□□□ -0.72
LCP1-201ENST00000323076 MAP3K1Q13233 1512 aa10.56□□□□□ -0.72
LCP1-201ENST00000323076 TSHZ2Q9NRE2 1034 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms