RNA–Protein interactions for RNA: ENST00000322659.12

PHF8-201, Transcript of PHD finger protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF8, Length 2,921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-201ENST00000322659 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
PHF8-201ENST00000322659 HRCP23327 699 aa19.82■□□□□ 0.76
PHF8-201ENST00000322659 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
PHF8-201ENST00000322659 PPARGC1BQ86YN6 1023 aaKnown RBP19.38■□□□□ 0.69
PHF8-201ENST00000322659 PCGF6Q9BYE7 350 aa19.28■□□□□ 0.68
PHF8-201ENST00000322659 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
PHF8-201ENST00000322659 MYT1Q01538 1121 aa18.94■□□□□ 0.62
PHF8-201ENST00000322659 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
PHF8-201ENST00000322659 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
PHF8-201ENST00000322659 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
PHF8-201ENST00000322659 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
PHF8-201ENST00000322659 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
PHF8-201ENST00000322659 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
PHF8-201ENST00000322659 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
PHF8-201ENST00000322659 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
PHF8-201ENST00000322659 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
PHF8-201ENST00000322659 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
PHF8-201ENST00000322659 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
PHF8-201ENST00000322659 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
PHF8-201ENST00000322659 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
PHF8-201ENST00000322659 DIEXFQ68CQ4 756 aaKnown RBP17.9■□□□□ 0.46
PHF8-201ENST00000322659 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
PHF8-201ENST00000322659 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
PHF8-201ENST00000322659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
PHF8-201ENST00000322659 CCER1Q8TC90 406 aaPredicted RBP17.74■□□□□ 0.43
PHF8-201ENST00000322659 BCL11AQ9H165 835 aa17.66■□□□□ 0.42
PHF8-201ENST00000322659 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
PHF8-201ENST00000322659 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
PHF8-201ENST00000322659 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
PHF8-201ENST00000322659 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
PHF8-201ENST00000322659 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
PHF8-201ENST00000322659 ANP32EQ9BTT0 268 aa17.49■□□□□ 0.39
PHF8-201ENST00000322659 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
PHF8-201ENST00000322659 MIER1Q8N108 512 aa17.4■□□□□ 0.38
PHF8-201ENST00000322659 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
PHF8-201ENST00000322659 TSHZ2Q9NRE2 1034 aa17.29■□□□□ 0.36
PHF8-201ENST00000322659 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
PHF8-201ENST00000322659 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
PHF8-201ENST00000322659 PRKCSHP14314 528 aaPredicted RBP17.14■□□□□ 0.33
PHF8-201ENST00000322659 ABCC9O60706 1549 aa17.04■□□□□ 0.32
PHF8-201ENST00000322659 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
PHF8-201ENST00000322659 RB1CC1Q8TDY2 1594 aa16.99■□□□□ 0.31
PHF8-201ENST00000322659 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
PHF8-201ENST00000322659 BCANQ96GW7 911 aa16.88■□□□□ 0.29
PHF8-201ENST00000322659 RBM19Q9Y4C8 960 aaKnown RBP16.86■□□□□ 0.29
PHF8-201ENST00000322659 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.29
PHF8-201ENST00000322659 ERICH6Q7L0X2 663 aa16.81■□□□□ 0.28
PHF8-201ENST00000322659 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
PHF8-201ENST00000322659 FKBP8Q14318 412 aa16.77■□□□□ 0.27
PHF8-201ENST00000322659 MSH5O43196 834 aa16.72■□□□□ 0.27
PHF8-201ENST00000322659 TNIKQ9UKE5 1360 aa16.67■□□□□ 0.26
PHF8-201ENST00000322659 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
PHF8-201ENST00000322659 NEFLP07196 543 aa16.63■□□□□ 0.25
PHF8-201ENST00000322659 ITGAEP38570 1179 aa16.63■□□□□ 0.25
PHF8-201ENST00000322659 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
PHF8-201ENST00000322659 MYT1LQ9UL68 1186 aa16.57■□□□□ 0.24
PHF8-201ENST00000322659 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
PHF8-201ENST00000322659 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
PHF8-201ENST00000322659 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
PHF8-201ENST00000322659 APLP2Q06481 763 aa16.54■□□□□ 0.24
PHF8-201ENST00000322659 ANO8Q9HCE9 1232 aaPredicted RBP16.54■□□□□ 0.24
PHF8-201ENST00000322659 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
PHF8-201ENST00000322659 DHX57Q6P158 1386 aaKnown RBP16.49■□□□□ 0.23
PHF8-201ENST00000322659 SOGA1O94964 1423 aa16.48■□□□□ 0.23
PHF8-201ENST00000322659 ABCC8Q09428 1581 aa16.48■□□□□ 0.23
PHF8-201ENST00000322659 CDK11AQ9UQ88 783 aaPredicted RBP16.43■□□□□ 0.22
PHF8-201ENST00000322659 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
PHF8-201ENST00000322659 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
PHF8-201ENST00000322659 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
PHF8-201ENST00000322659 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
PHF8-201ENST00000322659 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
PHF8-201ENST00000322659 EEA1Q15075 1411 aa16.38■□□□□ 0.21
PHF8-201ENST00000322659 WIZO95785 1651 aa16.37■□□□□ 0.21
PHF8-201ENST00000322659 SALL2Q9Y467 1007 aaPredicted RBP16.36■□□□□ 0.21
PHF8-201ENST00000322659 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
PHF8-201ENST00000322659 DDX10Q13206 875 aaKnown RBP16.35■□□□□ 0.21
PHF8-201ENST00000322659 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
PHF8-201ENST00000322659 CLIP1P30622 1438 aa16.31■□□□□ 0.2
PHF8-201ENST00000322659 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
PHF8-201ENST00000322659 NACADO15069 1562 aa16.31■□□□□ 0.2
PHF8-201ENST00000322659 NBR1Q14596 966 aa16.29■□□□□ 0.2
PHF8-201ENST00000322659 CCDC136Q96JN2 1154 aa16.26■□□□□ 0.19
PHF8-201ENST00000322659 CCER2I3L3R5 266 aa16.25■□□□□ 0.19
PHF8-201ENST00000322659 IRX6P78412 446 aaPredicted RBP16.25■□□□□ 0.19
PHF8-201ENST00000322659 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
PHF8-201ENST00000322659 NOP58Q9Y2X3 529 aaKnown RBP16.22■□□□□ 0.19
PHF8-201ENST00000322659 ANP32CO43423 234 aa16.21■□□□□ 0.19
PHF8-201ENST00000322659 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.18
PHF8-201ENST00000322659 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
PHF8-201ENST00000322659 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
PHF8-201ENST00000322659 UBE2Q2Q8WVN8 375 aa16.17■□□□□ 0.18
PHF8-201ENST00000322659 IL27Q8NEV9 243 aa16.16■□□□□ 0.18
PHF8-201ENST00000322659 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
PHF8-201ENST00000322659 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
PHF8-201ENST00000322659 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
PHF8-201ENST00000322659 PPP4R2Q9NY27 417 aa16.13■□□□□ 0.17
PHF8-201ENST00000322659 SLC24A1O60721 1099 aa16.12■□□□□ 0.17
PHF8-201ENST00000322659 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
PHF8-201ENST00000322659 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
PHF8-201ENST00000322659 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms