RNA–Protein interactions for RNA: ENST00000322028.4

POLR2L-201, Transcript of RNA polymerase II subunit L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2L, Length 892 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2L-201ENST00000322028 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
POLR2L-201ENST00000322028 ABCC9O60706 1549 aa31.54■■■□□ 2.64
POLR2L-201ENST00000322028 DNAJC5BQ9UF47 199 aa31.42■■■□□ 2.62
POLR2L-201ENST00000322028 DNAJC5Q9H3Z4 198 aa30.2■■■□□ 2.43
POLR2L-201ENST00000322028 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
POLR2L-201ENST00000322028 RB1CC1Q8TDY2 1594 aa29.11■■■□□ 2.25
POLR2L-201ENST00000322028 PABPN1Q86U42 306 aaKnown RBP eCLIP29.1■■■□□ 2.25
POLR2L-201ENST00000322028 CECR2Q9BXF3 1484 aa28.62■■■□□ 2.17
POLR2L-201ENST00000322028 NACADO15069 1562 aa28.48■■■□□ 2.15
POLR2L-201ENST00000322028 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
POLR2L-201ENST00000322028 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
POLR2L-201ENST00000322028 UNC13AQ9UPW8 1703 aa28.39■■■□□ 2.14
POLR2L-201ENST00000322028 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
POLR2L-201ENST00000322028 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
POLR2L-201ENST00000322028 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
POLR2L-201ENST00000322028 TRIM41Q8WV44 630 aa28■■■□□ 2.07
POLR2L-201ENST00000322028 CUX2O14529 1486 aa27.97■■■□□ 2.07
POLR2L-201ENST00000322028 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
POLR2L-201ENST00000322028 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
POLR2L-201ENST00000322028 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
POLR2L-201ENST00000322028 SCRIBQ14160 1630 aa27.54■■■□□ 2
POLR2L-201ENST00000322028 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
POLR2L-201ENST00000322028 AEBP2Q6ZN18 517 aaPredicted RBP26.8■■□□□ 1.88
POLR2L-201ENST00000322028 THOC2Q8NI27 1593 aaKnown RBP26.66■■□□□ 1.86
POLR2L-201ENST00000322028 NESP48681 1621 aa26.57■■□□□ 1.84
POLR2L-201ENST00000322028 NCAPD3P42695 1498 aa26.39■■□□□ 1.82
POLR2L-201ENST00000322028 OSCARQ8IYS5 282 aa26.37■■□□□ 1.81
POLR2L-201ENST00000322028 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
POLR2L-201ENST00000322028 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
POLR2L-201ENST00000322028 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
POLR2L-201ENST00000322028 ATAD2BQ9ULI0 1458 aa26.24■■□□□ 1.79
POLR2L-201ENST00000322028 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
POLR2L-201ENST00000322028 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
POLR2L-201ENST00000322028 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
POLR2L-201ENST00000322028 TRHP20396 242 aaPredicted RBP26.17■■□□□ 1.78
POLR2L-201ENST00000322028 ILDR1Q86SU0 546 aaPredicted RBP26.16■■□□□ 1.78
POLR2L-201ENST00000322028 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
POLR2L-201ENST00000322028 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
POLR2L-201ENST00000322028 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
POLR2L-201ENST00000322028 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
POLR2L-201ENST00000322028 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
POLR2L-201ENST00000322028 LAMC3Q9Y6N6 1575 aa26.01■■□□□ 1.75
POLR2L-201ENST00000322028 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
POLR2L-201ENST00000322028 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
POLR2L-201ENST00000322028 CYB5RLQ6IPT4 315 aa25.89■■□□□ 1.74
POLR2L-201ENST00000322028 WDR62O43379 1518 aa25.87■■□□□ 1.73
POLR2L-201ENST00000322028 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
POLR2L-201ENST00000322028 WIZO95785 1651 aa25.71■■□□□ 1.71
POLR2L-201ENST00000322028 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
POLR2L-201ENST00000322028 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
POLR2L-201ENST00000322028 CADPSQ9ULU8 1353 aa25.52■■□□□ 1.68
POLR2L-201ENST00000322028 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
POLR2L-201ENST00000322028 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
POLR2L-201ENST00000322028 CFTRP13569 1480 aa25.27■■□□□ 1.64
POLR2L-201ENST00000322028 FANCD2Q9BXW9 1451 aa25.22■■□□□ 1.63
POLR2L-201ENST00000322028 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
POLR2L-201ENST00000322028 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
POLR2L-201ENST00000322028 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
POLR2L-201ENST00000322028 PRDM2Q13029 1718 aa25■■□□□ 1.59
POLR2L-201ENST00000322028 KDM4FA0A1W2PPD8 638 aa25■■□□□ 1.59
POLR2L-201ENST00000322028 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
POLR2L-201ENST00000322028 CHD1O14646 1710 aa24.92■■□□□ 1.58
POLR2L-201ENST00000322028 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
POLR2L-201ENST00000322028 FBLN2P98095 1184 aa24.79■■□□□ 1.56
POLR2L-201ENST00000322028 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
POLR2L-201ENST00000322028 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
POLR2L-201ENST00000322028 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
POLR2L-201ENST00000322028 FBXO41Q8TF61 875 aa24.75■■□□□ 1.55
POLR2L-201ENST00000322028 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
POLR2L-201ENST00000322028 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
POLR2L-201ENST00000322028 LMTK3Q96Q04 1460 aa24.68■■□□□ 1.54
POLR2L-201ENST00000322028 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
POLR2L-201ENST00000322028 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
POLR2L-201ENST00000322028 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
POLR2L-201ENST00000322028 SOCS7O14512 581 aa24.58■■□□□ 1.53
POLR2L-201ENST00000322028 HECW2Q9P2P5 1572 aa24.54■■□□□ 1.52
POLR2L-201ENST00000322028 POLA1P09884 1462 aaPredicted RBP24.53■■□□□ 1.52
POLR2L-201ENST00000322028 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
POLR2L-201ENST00000322028 KIF13AQ9H1H9 1805 aa24.46■■□□□ 1.51
POLR2L-201ENST00000322028 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
POLR2L-201ENST00000322028 SOGA1O94964 1423 aa24.44■■□□□ 1.5
POLR2L-201ENST00000322028 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
POLR2L-201ENST00000322028 CUX1P39880 1505 aa24.44■■□□□ 1.5
POLR2L-201ENST00000322028 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
POLR2L-201ENST00000322028 RAD54L2Q9Y4B4 1467 aa24.44■■□□□ 1.5
POLR2L-201ENST00000322028 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
POLR2L-201ENST00000322028 CHMP7Q8WUX9 453 aaPredicted RBP24.31■■□□□ 1.48
POLR2L-201ENST00000322028 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
POLR2L-201ENST00000322028 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
POLR2L-201ENST00000322028 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
POLR2L-201ENST00000322028 ADGRL1O94910 1474 aa24.26■■□□□ 1.47
POLR2L-201ENST00000322028 KDM6BO15054 1643 aa24.25■■□□□ 1.47
POLR2L-201ENST00000322028 FAM69CQ0P6D2 419 aa24.21■■□□□ 1.47
POLR2L-201ENST00000322028 GRIN2BQ13224 1484 aa24.2■■□□□ 1.47
POLR2L-201ENST00000322028 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.466e-6■□□□□ 10.9
POLR2L-201ENST00000322028 MAGI1Q96QZ7 1491 aaPredicted RBP24.18■■□□□ 1.46
POLR2L-201ENST00000322028 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
POLR2L-201ENST00000322028 ABCC10Q5T3U5 1492 aa24.17■■□□□ 1.46
POLR2L-201ENST00000322028 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
POLR2L-201ENST00000322028 DISP3Q9P2K9 1392 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms