RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 NISCHQ9Y2I1 1504 aa21.53■■□□□ 1.04
LCLAT1-202ENST00000319406 CCDC180Q9P1Z9 1646 aa18.47■□□□□ 0.55
LCLAT1-202ENST00000319406 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
LCLAT1-202ENST00000319406 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
LCLAT1-202ENST00000319406 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
LCLAT1-202ENST00000319406 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
LCLAT1-202ENST00000319406 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
LCLAT1-202ENST00000319406 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
LCLAT1-202ENST00000319406 ABCC9O60706 1549 aa17.16■□□□□ 0.34
LCLAT1-202ENST00000319406 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
LCLAT1-202ENST00000319406 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
LCLAT1-202ENST00000319406 NACADO15069 1562 aa17.07■□□□□ 0.32
LCLAT1-202ENST00000319406 HRCP23327 699 aa17.03■□□□□ 0.32
LCLAT1-202ENST00000319406 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
LCLAT1-202ENST00000319406 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
LCLAT1-202ENST00000319406 CECR2Q9BXF3 1484 aa16.74■□□□□ 0.27
LCLAT1-202ENST00000319406 PPARGC1BQ86YN6 1023 aaKnown RBP16.74■□□□□ 0.27
LCLAT1-202ENST00000319406 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
LCLAT1-202ENST00000319406 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
LCLAT1-202ENST00000319406 WIZO95785 1651 aa16.58■□□□□ 0.24
LCLAT1-202ENST00000319406 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
LCLAT1-202ENST00000319406 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
LCLAT1-202ENST00000319406 PELP1Q8IZL8 1130 aaKnown RBP16.47■□□□□ 0.23
LCLAT1-202ENST00000319406 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
LCLAT1-202ENST00000319406 SMARCA4P51532 1647 aa16.44■□□□□ 0.22
LCLAT1-202ENST00000319406 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
LCLAT1-202ENST00000319406 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
LCLAT1-202ENST00000319406 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
LCLAT1-202ENST00000319406 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
LCLAT1-202ENST00000319406 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
LCLAT1-202ENST00000319406 CCDC88BA6NC98 1476 aa16.25■□□□□ 0.19
LCLAT1-202ENST00000319406 PEG3Q9GZU2 1588 aa16.23■□□□□ 0.19
LCLAT1-202ENST00000319406 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
LCLAT1-202ENST00000319406 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
LCLAT1-202ENST00000319406 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
LCLAT1-202ENST00000319406 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
LCLAT1-202ENST00000319406 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
LCLAT1-202ENST00000319406 ATAD2BQ9ULI0 1458 aa16.04■□□□□ 0.16
LCLAT1-202ENST00000319406 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
LCLAT1-202ENST00000319406 SOGA1O94964 1423 aa15.91■□□□□ 0.14
LCLAT1-202ENST00000319406 EEA1Q15075 1411 aa15.89■□□□□ 0.13
LCLAT1-202ENST00000319406 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
LCLAT1-202ENST00000319406 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
LCLAT1-202ENST00000319406 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
LCLAT1-202ENST00000319406 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
LCLAT1-202ENST00000319406 RUSC2Q8N2Y8 1516 aa15.85■□□□□ 0.13
LCLAT1-202ENST00000319406 MYT1Q01538 1121 aa15.81■□□□□ 0.12
LCLAT1-202ENST00000319406 HMGXB3Q12766 1538 aa15.8■□□□□ 0.12
LCLAT1-202ENST00000319406 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
LCLAT1-202ENST00000319406 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
LCLAT1-202ENST00000319406 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
LCLAT1-202ENST00000319406 CEP162Q5TB80 1403 aa15.77■□□□□ 0.11
LCLAT1-202ENST00000319406 ACIN1Q9UKV3 1341 aaKnown RBP15.74■□□□□ 0.11
LCLAT1-202ENST00000319406 GOLGA3Q08378 1498 aa15.73■□□□□ 0.11
LCLAT1-202ENST00000319406 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
LCLAT1-202ENST00000319406 KIF21BO75037 1637 aa15.71■□□□□ 0.11
LCLAT1-202ENST00000319406 TOP2BQ02880 1626 aa15.71■□□□□ 0.1
LCLAT1-202ENST00000319406 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
LCLAT1-202ENST00000319406 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
LCLAT1-202ENST00000319406 GTF3C3Q9Y5Q9 886 aa15.62■□□□□ 0.09
LCLAT1-202ENST00000319406 CFTRP13569 1480 aa15.6■□□□□ 0.09
LCLAT1-202ENST00000319406 UBTFP17480 764 aaKnown RBP15.58■□□□□ 0.08
LCLAT1-202ENST00000319406 CUX1P39880 1505 aa15.56■□□□□ 0.08
LCLAT1-202ENST00000319406 RAPGEF2Q9Y4G8 1499 aa15.56■□□□□ 0.08
LCLAT1-202ENST00000319406 PRDM2Q13029 1718 aa15.52■□□□□ 0.08
LCLAT1-202ENST00000319406 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
LCLAT1-202ENST00000319406 CLIP1P30622 1438 aa15.5■□□□□ 0.07
LCLAT1-202ENST00000319406 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
LCLAT1-202ENST00000319406 VPS8Q8N3P4 1428 aa15.46■□□□□ 0.06
LCLAT1-202ENST00000319406 CENPBP07199 599 aaPredicted RBP15.42■□□□□ 0.06
LCLAT1-202ENST00000319406 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
LCLAT1-202ENST00000319406 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
LCLAT1-202ENST00000319406 DIEXFQ68CQ4 756 aaKnown RBP15.4■□□□□ 0.06
LCLAT1-202ENST00000319406 KIF27Q86VH2 1401 aa15.4■□□□□ 0.06
LCLAT1-202ENST00000319406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
LCLAT1-202ENST00000319406 TTBK1Q5TCY1 1321 aaPredicted RBP15.35■□□□□ 0.05
LCLAT1-202ENST00000319406 ARAP1Q96P48 1450 aa15.34■□□□□ 0.05
LCLAT1-202ENST00000319406 CCER1Q8TC90 406 aaPredicted RBP15.31■□□□□ 0.04
LCLAT1-202ENST00000319406 FGD5Q6ZNL6 1462 aa15.28■□□□□ 0.04
LCLAT1-202ENST00000319406 IGF1RP08069 1367 aa15.27■□□□□ 0.03
LCLAT1-202ENST00000319406 CUX2O14529 1486 aa15.26■□□□□ 0.03
LCLAT1-202ENST00000319406 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
LCLAT1-202ENST00000319406 ARHGAP35Q9NRY4 1499 aa15.23■□□□□ 0.03
LCLAT1-202ENST00000319406 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
LCLAT1-202ENST00000319406 RANGAP1P46060 587 aaPredicted RBP15.19■□□□□ 0.02
LCLAT1-202ENST00000319406 APLP2Q06481 763 aa15.17■□□□□ 0.02
LCLAT1-202ENST00000319406 NESP48681 1621 aa15.16■□□□□ 0.02
LCLAT1-202ENST00000319406 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
LCLAT1-202ENST00000319406 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
LCLAT1-202ENST00000319406 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
LCLAT1-202ENST00000319406 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
LCLAT1-202ENST00000319406 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
LCLAT1-202ENST00000319406 LAMC3Q9Y6N6 1575 aa15.13■□□□□ 0.01
LCLAT1-202ENST00000319406 KANK4Q5T7N3 995 aaPredicted RBP15.13■□□□□ 0.01
LCLAT1-202ENST00000319406 RRBP1Q9P2E9 1410 aaKnown RBP15.11■□□□□ 0.01
LCLAT1-202ENST00000319406 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
LCLAT1-202ENST00000319406 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
LCLAT1-202ENST00000319406 MAP3K1Q13233 1512 aa15.09■□□□□ 0.01
LCLAT1-202ENST00000319406 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
LCLAT1-202ENST00000319406 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms