RNA–Protein interactions for RNA: ENST00000315567.12

MRPL1-201, Transcript of mitochondrial ribosomal protein L1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL1-201ENST00000315567 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
MRPL1-201ENST00000315567 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
MRPL1-201ENST00000315567 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
MRPL1-201ENST00000315567 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
MRPL1-201ENST00000315567 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
MRPL1-201ENST00000315567 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
MRPL1-201ENST00000315567 FOXD1Q16676 465 aa18.25■□□□□ 0.51
MRPL1-201ENST00000315567 POTEDQ86YR6 584 aa17.69■□□□□ 0.42
MRPL1-201ENST00000315567 ADRA2BP18089 450 aa17.51■□□□□ 0.39
MRPL1-201ENST00000315567 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
MRPL1-201ENST00000315567 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
MRPL1-201ENST00000315567 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.3
MRPL1-201ENST00000315567 MSH5O43196 834 aa16.88■□□□□ 0.29
MRPL1-201ENST00000315567 ZCCHC6Q5VYS8 1495 aaKnown RBP16.33■□□□□ 0.2
MRPL1-201ENST00000315567 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
MRPL1-201ENST00000315567 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
MRPL1-201ENST00000315567 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.16
MRPL1-201ENST00000315567 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
MRPL1-201ENST00000315567 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
MRPL1-201ENST00000315567 SHROOM4Q9ULL8 1493 aa15.82■□□□□ 0.12
MRPL1-201ENST00000315567 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
MRPL1-201ENST00000315567 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
MRPL1-201ENST00000315567 KCNA4P22459 653 aa15.76■□□□□ 0.11
MRPL1-201ENST00000315567 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
MRPL1-201ENST00000315567 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.1
MRPL1-201ENST00000315567 ABCC9O60706 1549 aa15.67■□□□□ 0.1
MRPL1-201ENST00000315567 NACADO15069 1562 aa15.65■□□□□ 0.1
MRPL1-201ENST00000315567 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
MRPL1-201ENST00000315567 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
MRPL1-201ENST00000315567 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
MRPL1-201ENST00000315567 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
MRPL1-201ENST00000315567 HOXD11P31277 338 aaPredicted RBP15.38■□□□□ 0.05
MRPL1-201ENST00000315567 SUPT5HO00267 1087 aaKnown RBP15.3■□□□□ 0.04
MRPL1-201ENST00000315567 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
MRPL1-201ENST00000315567 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
MRPL1-201ENST00000315567 RSF1Q96T23 1441 aaPredicted RBP15.06■□□□□ 0
MRPL1-201ENST00000315567 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
MRPL1-201ENST00000315567 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
MRPL1-201ENST00000315567 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
MRPL1-201ENST00000315567 CECR2Q9BXF3 1484 aa14.97□□□□□ -0.01
MRPL1-201ENST00000315567 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
MRPL1-201ENST00000315567 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
MRPL1-201ENST00000315567 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
MRPL1-201ENST00000315567 WIZO95785 1651 aa14.85□□□□□ -0.03
MRPL1-201ENST00000315567 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
MRPL1-201ENST00000315567 TOP2AP11388 1531 aaKnown RBP14.74□□□□□ -0.05
MRPL1-201ENST00000315567 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
MRPL1-201ENST00000315567 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
MRPL1-201ENST00000315567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
MRPL1-201ENST00000315567 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
MRPL1-201ENST00000315567 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
MRPL1-201ENST00000315567 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
MRPL1-201ENST00000315567 EIF4G1Q04637 1599 aaKnown RBP14.57□□□□□ -0.08
MRPL1-201ENST00000315567 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
MRPL1-201ENST00000315567 ATAD2BQ9ULI0 1458 aa14.55□□□□□ -0.08
MRPL1-201ENST00000315567 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
MRPL1-201ENST00000315567 BAZ1BQ9UIG0 1483 aaKnown RBP14.49□□□□□ -0.09
MRPL1-201ENST00000315567 ZBTB22O15209 634 aa14.49□□□□□ -0.09
MRPL1-201ENST00000315567 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
MRPL1-201ENST00000315567 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
MRPL1-201ENST00000315567 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
MRPL1-201ENST00000315567 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
MRPL1-201ENST00000315567 NCAPD3P42695 1498 aa14.41□□□□□ -0.1
MRPL1-201ENST00000315567 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
MRPL1-201ENST00000315567 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
MRPL1-201ENST00000315567 ABCC8Q09428 1581 aa14.28□□□□□ -0.12
MRPL1-201ENST00000315567 C1QBPQ07021 282 aaKnown RBP14.28□□□□□ -0.12
MRPL1-201ENST00000315567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.12
MRPL1-201ENST00000315567 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.12
MRPL1-201ENST00000315567 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
MRPL1-201ENST00000315567 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
MRPL1-201ENST00000315567 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
MRPL1-201ENST00000315567 PRDM2Q13029 1718 aa14.17□□□□□ -0.14
MRPL1-201ENST00000315567 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
MRPL1-201ENST00000315567 EEA1Q15075 1411 aa14.15□□□□□ -0.14
MRPL1-201ENST00000315567 APLP2Q06481 763 aa14.14□□□□□ -0.15
MRPL1-201ENST00000315567 CFTRP13569 1480 aa14.13□□□□□ -0.15
MRPL1-201ENST00000315567 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
MRPL1-201ENST00000315567 BIVM-ERCC5R4GMW8 1640 aa14.1□□□□□ -0.15
MRPL1-201ENST00000315567 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
MRPL1-201ENST00000315567 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
MRPL1-201ENST00000315567 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
MRPL1-201ENST00000315567 SOGA1O94964 1423 aa14.03□□□□□ -0.16
MRPL1-201ENST00000315567 CADPSQ9ULU8 1353 aa14.03□□□□□ -0.16
MRPL1-201ENST00000315567 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
MRPL1-201ENST00000315567 CAPN15O75808 1086 aa13.98□□□□□ -0.17
MRPL1-201ENST00000315567 CUX1P39880 1505 aa13.97□□□□□ -0.17
MRPL1-201ENST00000315567 KIF21BO75037 1637 aa13.95□□□□□ -0.18
MRPL1-201ENST00000315567 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
MRPL1-201ENST00000315567 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
MRPL1-201ENST00000315567 ATF5Q9Y2D1 282 aaPredicted RBP13.93□□□□□ -0.18
MRPL1-201ENST00000315567 LAMC3Q9Y6N6 1575 aa13.93□□□□□ -0.18
MRPL1-201ENST00000315567 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
MRPL1-201ENST00000315567 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
MRPL1-201ENST00000315567 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
MRPL1-201ENST00000315567 TNIKQ9UKE5 1360 aa13.89□□□□□ -0.19
MRPL1-201ENST00000315567 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
MRPL1-201ENST00000315567 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.19
MRPL1-201ENST00000315567 KIF27Q86VH2 1401 aa13.83□□□□□ -0.2
MRPL1-201ENST00000315567 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms