RNA–Protein interactions for RNA: ENST00000314235.9

KCNMB3-201, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best) BASIC

Gene KCNMB3, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-201ENST00000314235 AEBP2Q6ZN18 517 aaPredicted RBP34.36■■■■□ 3.09
KCNMB3-201ENST00000314235 CHIC1Q5VXU3 224 aa32.41■■■□□ 2.78
KCNMB3-201ENST00000314235 SENP3Q9H4L4 574 aaPredicted RBP29.32■■■□□ 2.28
KCNMB3-201ENST00000314235 PHF23Q9BUL5 403 aaPredicted RBP28.9■■■□□ 2.22
KCNMB3-201ENST00000314235 FOXD1Q16676 465 aa27.36■■□□□ 1.97
KCNMB3-201ENST00000314235 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
KCNMB3-201ENST00000314235 MSH5O43196 834 aa25.69■■□□□ 1.7
KCNMB3-201ENST00000314235 PIAS4Q8N2W9 510 aaPredicted RBP25.47■■□□□ 1.67
KCNMB3-201ENST00000314235 POTEDQ86YR6 584 aa25.46■■□□□ 1.67
KCNMB3-201ENST00000314235 PPP6R1Q9UPN7 881 aa25.41■■□□□ 1.66
KCNMB3-201ENST00000314235 ADRA2BP18089 450 aa25.28■■□□□ 1.64
KCNMB3-201ENST00000314235 NISCHQ9Y2I1 1504 aa23.5■■□□□ 1.35
KCNMB3-201ENST00000314235 MAPK8IP2Q13387 824 aaPredicted RBP23.29■■□□□ 1.32
KCNMB3-201ENST00000314235 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
KCNMB3-201ENST00000314235 SCAF1Q9H7N4 1312 aaKnown RBP23.12■■□□□ 1.29
KCNMB3-201ENST00000314235 PPP4R3CPQ6ZMV5 832 aa22.54■■□□□ 1.2
KCNMB3-201ENST00000314235 HOXD11P31277 338 aaPredicted RBP22.32■■□□□ 1.16
KCNMB3-201ENST00000314235 CNKSR2Q8WXI2 1034 aa22.19■■□□□ 1.14
KCNMB3-201ENST00000314235 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
KCNMB3-201ENST00000314235 CACNB1Q02641 598 aaPredicted RBP22.12■■□□□ 1.13
KCNMB3-201ENST00000314235 RNF216Q9NWF9 866 aaPredicted RBP22.07■■□□□ 1.12
KCNMB3-201ENST00000314235 RNF39Q9H2S5 420 aa21.92■■□□□ 1.1
KCNMB3-201ENST00000314235 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.06
KCNMB3-201ENST00000314235 NCBP3Q53F19 620 aaKnown RBP21.58■■□□□ 1.05
KCNMB3-201ENST00000314235 C1QBPQ07021 282 aaKnown RBP21.58■■□□□ 1.04
KCNMB3-201ENST00000314235 NPM3O75607 178 aaKnown RBP21.32■■□□□ 1
KCNMB3-201ENST00000314235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.98
KCNMB3-201ENST00000314235 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
KCNMB3-201ENST00000314235 KCNA4P22459 653 aa20.69■□□□□ 0.9
KCNMB3-201ENST00000314235 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.88
KCNMB3-201ENST00000314235 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
KCNMB3-201ENST00000314235 SLC4A2P04920 1241 aa20.44■□□□□ 0.86
KCNMB3-201ENST00000314235 DSG3P32926 999 aa20.44■□□□□ 0.86
KCNMB3-201ENST00000314235 CAPN15O75808 1086 aa20.42■□□□□ 0.86
KCNMB3-201ENST00000314235 APLP2Q06481 763 aa20.11■□□□□ 0.81
KCNMB3-201ENST00000314235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
KCNMB3-201ENST00000314235 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
KCNMB3-201ENST00000314235 ZNF219Q9P2Y4 722 aaPredicted RBP20.05■□□□□ 0.8
KCNMB3-201ENST00000314235 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
KCNMB3-201ENST00000314235 SAMD1Q6SPF0 538 aaPredicted RBP19.94■□□□□ 0.78
KCNMB3-201ENST00000314235 ABCB7O75027 752 aa19.93■□□□□ 0.78
KCNMB3-201ENST00000314235 POTEHQ6S545 545 aa19.89■□□□□ 0.77
KCNMB3-201ENST00000314235 MYCNP04198 464 aaPredicted RBP19.71■□□□□ 0.75
KCNMB3-201ENST00000314235 ABCC9O60706 1549 aa19.69■□□□□ 0.74
KCNMB3-201ENST00000314235 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
KCNMB3-201ENST00000314235 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.72
KCNMB3-201ENST00000314235 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
KCNMB3-201ENST00000314235 POLA2Q14181 598 aa19.48■□□□□ 0.71
KCNMB3-201ENST00000314235 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
KCNMB3-201ENST00000314235 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
KCNMB3-201ENST00000314235 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
KCNMB3-201ENST00000314235 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.68
KCNMB3-201ENST00000314235 ATF5Q9Y2D1 282 aaPredicted RBP19.28■□□□□ 0.68
KCNMB3-201ENST00000314235 NACADO15069 1562 aa19.27■□□□□ 0.68
KCNMB3-201ENST00000314235 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
KCNMB3-201ENST00000314235 CHRDL2Q6WN34 429 aa19.15■□□□□ 0.66
KCNMB3-201ENST00000314235 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
KCNMB3-201ENST00000314235 ZBTB22O15209 634 aa19.04■□□□□ 0.64
KCNMB3-201ENST00000314235 AKT1S1Q96B36 256 aa19.01■□□□□ 0.63
KCNMB3-201ENST00000314235 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
KCNMB3-201ENST00000314235 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
KCNMB3-201ENST00000314235 SCRIBQ14160 1630 aa18.87■□□□□ 0.61
KCNMB3-201ENST00000314235 ATXN8OSP0DMR3 200 aa18.85■□□□□ 0.61
KCNMB3-201ENST00000314235 REM2Q8IYK8 340 aaPredicted RBP18.82■□□□□ 0.6
KCNMB3-201ENST00000314235 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
KCNMB3-201ENST00000314235 PIP4P2Q8N4L2 257 aa18.65■□□□□ 0.58
KCNMB3-201ENST00000314235 PITPNM1O00562 1244 aa18.62■□□□□ 0.57
KCNMB3-201ENST00000314235 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
KCNMB3-201ENST00000314235 FXR2P51116 673 aaKnown RBP eCLIP18.54■□□□□ 0.56
KCNMB3-201ENST00000314235 SP7Q8TDD2 431 aaPredicted RBP18.54■□□□□ 0.56
KCNMB3-201ENST00000314235 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
KCNMB3-201ENST00000314235 SPDYE2BA6NHP3 402 aa18.5■□□□□ 0.55
KCNMB3-201ENST00000314235 SPDYE6P0CI01 402 aa18.5■□□□□ 0.55
KCNMB3-201ENST00000314235 FBLN2P98095 1184 aa18.5■□□□□ 0.55
KCNMB3-201ENST00000314235 SPDYE2Q495Y8 402 aa18.5■□□□□ 0.55
KCNMB3-201ENST00000314235 MKRN4PQ13434 485 aaPredicted RBP18.4■□□□□ 0.54
KCNMB3-201ENST00000314235 HAX1O00165 279 aa18.31■□□□□ 0.52
KCNMB3-201ENST00000314235 SSUH2Q9Y2M2 353 aa18.26■□□□□ 0.51
KCNMB3-201ENST00000314235 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
KCNMB3-201ENST00000314235 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
KCNMB3-201ENST00000314235 SPDYE1Q8NFV5 336 aaPredicted RBP18.2■□□□□ 0.5
KCNMB3-201ENST00000314235 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
KCNMB3-201ENST00000314235 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
KCNMB3-201ENST00000314235 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
KCNMB3-201ENST00000314235 EVX2Q03828 476 aa18.14■□□□□ 0.49
KCNMB3-201ENST00000314235 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
KCNMB3-201ENST00000314235 CLEC11AQ9Y240 323 aa18.12■□□□□ 0.49
KCNMB3-201ENST00000314235 PRKAR2AP13861 404 aaKnown RBP18.1■□□□□ 0.49
KCNMB3-201ENST00000314235 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
KCNMB3-201ENST00000314235 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
KCNMB3-201ENST00000314235 C19orf67A6NJJ6 358 aa17.95■□□□□ 0.46
KCNMB3-201ENST00000314235 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
KCNMB3-201ENST00000314235 WIZO95785 1651 aa17.94■□□□□ 0.46
KCNMB3-201ENST00000314235 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
KCNMB3-201ENST00000314235 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
KCNMB3-201ENST00000314235 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
KCNMB3-201ENST00000314235 CHADLQ6NUI6 762 aa17.83■□□□□ 0.45
KCNMB3-201ENST00000314235 PRR29P0C7W0 189 aa17.82■□□□□ 0.44
KCNMB3-201ENST00000314235 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
KCNMB3-201ENST00000314235 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms