RNA–Protein interactions for RNA: ENST00000313548.5

CFAP47-202, Transcript of cilia and flagella associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CFAP47, Length 1,549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP47-202ENST00000313548 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
CFAP47-202ENST00000313548 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
CFAP47-202ENST00000313548 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
CFAP47-202ENST00000313548 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
CFAP47-202ENST00000313548 FOXD1Q16676 465 aa16.13■□□□□ 0.17
CFAP47-202ENST00000313548 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
CFAP47-202ENST00000313548 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
CFAP47-202ENST00000313548 MSH5O43196 834 aa15.17■□□□□ 0.02
CFAP47-202ENST00000313548 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
CFAP47-202ENST00000313548 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
CFAP47-202ENST00000313548 ADRA2BP18089 450 aa14.83□□□□□ -0.04
CFAP47-202ENST00000313548 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
CFAP47-202ENST00000313548 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
CFAP47-202ENST00000313548 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
CFAP47-202ENST00000313548 NISCHQ9Y2I1 1504 aa13.57□□□□□ -0.24
CFAP47-202ENST00000313548 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
CFAP47-202ENST00000313548 CACNB1Q02641 598 aaPredicted RBP13.29□□□□□ -0.28
CFAP47-202ENST00000313548 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
CFAP47-202ENST00000313548 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
CFAP47-202ENST00000313548 HOXD11P31277 338 aaPredicted RBP13.08□□□□□ -0.32
CFAP47-202ENST00000313548 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
CFAP47-202ENST00000313548 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
CFAP47-202ENST00000313548 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
CFAP47-202ENST00000313548 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.35
CFAP47-202ENST00000313548 KCNA4P22459 653 aa12.77□□□□□ -0.37
CFAP47-202ENST00000313548 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
CFAP47-202ENST00000313548 DNAJC5BQ9UF47 199 aa12.63□□□□□ -0.39
CFAP47-202ENST00000313548 ABCC9O60706 1549 aa12.48□□□□□ -0.41
CFAP47-202ENST00000313548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.42
CFAP47-202ENST00000313548 CCDC180Q9P1Z9 1646 aa12.32□□□□□ -0.44
CFAP47-202ENST00000313548 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
CFAP47-202ENST00000313548 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
CFAP47-202ENST00000313548 POTEHQ6S545 545 aa12.15□□□□□ -0.46
CFAP47-202ENST00000313548 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
CFAP47-202ENST00000313548 SPINK5Q9NQ38 1064 aaPredicted RBP12.04□□□□□ -0.48
CFAP47-202ENST00000313548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
CFAP47-202ENST00000313548 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
CFAP47-202ENST00000313548 DSG3P32926 999 aa12□□□□□ -0.49
CFAP47-202ENST00000313548 CAPN15O75808 1086 aa11.99□□□□□ -0.49
CFAP47-202ENST00000313548 APLP2Q06481 763 aa11.99□□□□□ -0.49
CFAP47-202ENST00000313548 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
CFAP47-202ENST00000313548 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
CFAP47-202ENST00000313548 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
CFAP47-202ENST00000313548 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
CFAP47-202ENST00000313548 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
CFAP47-202ENST00000313548 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
CFAP47-202ENST00000313548 RB1CC1Q8TDY2 1594 aa11.78□□□□□ -0.52
CFAP47-202ENST00000313548 ABCB7O75027 752 aa11.74□□□□□ -0.53
CFAP47-202ENST00000313548 ZBTB22O15209 634 aa11.7□□□□□ -0.54
CFAP47-202ENST00000313548 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.55
CFAP47-202ENST00000313548 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
CFAP47-202ENST00000313548 NACADO15069 1562 aa11.63□□□□□ -0.55
CFAP47-202ENST00000313548 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
CFAP47-202ENST00000313548 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
CFAP47-202ENST00000313548 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
CFAP47-202ENST00000313548 POLA2Q14181 598 aa11.52□□□□□ -0.57
CFAP47-202ENST00000313548 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
CFAP47-202ENST00000313548 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
CFAP47-202ENST00000313548 ZBTB12Q9Y330 459 aaPredicted RBP11.39□□□□□ -0.59
CFAP47-202ENST00000313548 MYO15BQ96JP2 1530 aa11.38□□□□□ -0.59
CFAP47-202ENST00000313548 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
CFAP47-202ENST00000313548 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
CFAP47-202ENST00000313548 CC2D2AQ9P2K1 1620 aa11.28□□□□□ -0.6
CFAP47-202ENST00000313548 CECR2Q9BXF3 1484 aa11.23□□□□□ -0.61
CFAP47-202ENST00000313548 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
CFAP47-202ENST00000313548 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
CFAP47-202ENST00000313548 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.62
CFAP47-202ENST00000313548 EIF4G1Q04637 1599 aaKnown RBP11.19□□□□□ -0.62
CFAP47-202ENST00000313548 FBLN2P98095 1184 aa11.18□□□□□ -0.62
CFAP47-202ENST00000313548 DCAF1Q9Y4B6 1507 aa11.18□□□□□ -0.62
CFAP47-202ENST00000313548 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
CFAP47-202ENST00000313548 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
CFAP47-202ENST00000313548 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
CFAP47-202ENST00000313548 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
CFAP47-202ENST00000313548 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
CFAP47-202ENST00000313548 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
CFAP47-202ENST00000313548 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
CFAP47-202ENST00000313548 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
CFAP47-202ENST00000313548 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
CFAP47-202ENST00000313548 DNAJC5Q9H3Z4 198 aa10.98□□□□□ -0.65
CFAP47-202ENST00000313548 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
CFAP47-202ENST00000313548 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
CFAP47-202ENST00000313548 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
CFAP47-202ENST00000313548 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
CFAP47-202ENST00000313548 HAX1O00165 279 aa10.85□□□□□ -0.67
CFAP47-202ENST00000313548 EVX2Q03828 476 aa10.82□□□□□ -0.68
CFAP47-202ENST00000313548 CUX2O14529 1486 aa10.8□□□□□ -0.68
CFAP47-202ENST00000313548 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
CFAP47-202ENST00000313548 ERCC6Q03468 1493 aa10.75□□□□□ -0.69
CFAP47-202ENST00000313548 CLEC11AQ9Y240 323 aa10.72□□□□□ -0.69
CFAP47-202ENST00000313548 NCAPD3P42695 1498 aa10.72□□□□□ -0.69
CFAP47-202ENST00000313548 ATAD2BQ9ULI0 1458 aa10.67□□□□□ -0.7
CFAP47-202ENST00000313548 NESP48681 1621 aa10.67□□□□□ -0.7
CFAP47-202ENST00000313548 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
CFAP47-202ENST00000313548 SMARCA4P51532 1647 aa10.67□□□□□ -0.7
CFAP47-202ENST00000313548 HMGXB3Q12766 1538 aa10.65□□□□□ -0.7
CFAP47-202ENST00000313548 SMARCA2P51531 1590 aa10.64□□□□□ -0.71
CFAP47-202ENST00000313548 THOC2Q8NI27 1593 aaKnown RBP10.63□□□□□ -0.71
CFAP47-202ENST00000313548 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
CFAP47-202ENST00000313548 KIF21AQ7Z4S6 1674 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms