RNA–Protein interactions for RNA: ENST00000313421.11

CD6-201, Transcript of CD6 molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD6, Length 3,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD6-201ENST00000313421 NISCHQ9Y2I1 1504 aa27.5■■□□□ 1.99
CD6-201ENST00000313421 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
CD6-201ENST00000313421 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
CD6-201ENST00000313421 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
CD6-201ENST00000313421 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
CD6-201ENST00000313421 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
CD6-201ENST00000313421 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
CD6-201ENST00000313421 HRCP23327 699 aa23.73■■□□□ 1.39
CD6-201ENST00000313421 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
CD6-201ENST00000313421 MYT1Q01538 1121 aa23.52■■□□□ 1.36
CD6-201ENST00000313421 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
CD6-201ENST00000313421 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
CD6-201ENST00000313421 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
CD6-201ENST00000313421 ZCCHC6Q5VYS8 1495 aaKnown RBP23.22■■□□□ 1.31
CD6-201ENST00000313421 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
CD6-201ENST00000313421 SCAF1Q9H7N4 1312 aaKnown RBP23.15■■□□□ 1.3
CD6-201ENST00000313421 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
CD6-201ENST00000313421 TTBK1Q5TCY1 1321 aaPredicted RBP22.81■■□□□ 1.24
CD6-201ENST00000313421 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
CD6-201ENST00000313421 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
CD6-201ENST00000313421 PRKCSHP14314 528 aaPredicted RBP22.39■■□□□ 1.17
CD6-201ENST00000313421 BCL11AQ9H165 835 aa22.33■■□□□ 1.17
CD6-201ENST00000313421 GTF3C3Q9Y5Q9 886 aa22.23■■□□□ 1.15
CD6-201ENST00000313421 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.14
CD6-201ENST00000313421 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
CD6-201ENST00000313421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
CD6-201ENST00000313421 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.13
CD6-201ENST00000313421 YTHDC1Q96MU7 727 aaKnown RBP22.14■■□□□ 1.13
CD6-201ENST00000313421 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
CD6-201ENST00000313421 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
CD6-201ENST00000313421 RANGAP1P46060 587 aaPredicted RBP22.11■■□□□ 1.13
CD6-201ENST00000313421 ABCC9O60706 1549 aa22.02■■□□□ 1.12
CD6-201ENST00000313421 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
CD6-201ENST00000313421 CENPBP07199 599 aaPredicted RBP21.95■■□□□ 1.1
CD6-201ENST00000313421 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.1
CD6-201ENST00000313421 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
CD6-201ENST00000313421 RB1CC1Q8TDY2 1594 aa21.81■■□□□ 1.08
CD6-201ENST00000313421 CECR2Q9BXF3 1484 aa21.79■■□□□ 1.08
CD6-201ENST00000313421 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
CD6-201ENST00000313421 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
CD6-201ENST00000313421 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
CD6-201ENST00000313421 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
CD6-201ENST00000313421 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
CD6-201ENST00000313421 ANP32EQ9BTT0 268 aa21.47■■□□□ 1.03
CD6-201ENST00000313421 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
CD6-201ENST00000313421 WIZO95785 1651 aa21.42■■□□□ 1.02
CD6-201ENST00000313421 APLP2Q06481 763 aa21.35■■□□□ 1.01
CD6-201ENST00000313421 NACADO15069 1562 aa21.34■■□□□ 1.01
CD6-201ENST00000313421 ABCC8Q09428 1581 aa21.33■■□□□ 1
CD6-201ENST00000313421 SOGA1O94964 1423 aa21.27■■□□□ 1
CD6-201ENST00000313421 CCDC88BA6NC98 1476 aa21.24■□□□□ 0.99
CD6-201ENST00000313421 MIER1Q8N108 512 aa21.24■□□□□ 0.99
CD6-201ENST00000313421 ITGAEP38570 1179 aa21.22■□□□□ 0.99
CD6-201ENST00000313421 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
CD6-201ENST00000313421 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
CD6-201ENST00000313421 BCANQ96GW7 911 aa21.14■□□□□ 0.97
CD6-201ENST00000313421 CEP162Q5TB80 1403 aa21.09■□□□□ 0.97
CD6-201ENST00000313421 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
CD6-201ENST00000313421 ANO8Q9HCE9 1232 aaPredicted RBP20.98■□□□□ 0.95
CD6-201ENST00000313421 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
CD6-201ENST00000313421 TSHZ2Q9NRE2 1034 aa20.94■□□□□ 0.94
CD6-201ENST00000313421 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
CD6-201ENST00000313421 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
CD6-201ENST00000313421 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
CD6-201ENST00000313421 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
CD6-201ENST00000313421 SUPT16HQ9Y5B9 1047 aaKnown RBP20.82■□□□□ 0.92
CD6-201ENST00000313421 TNIKQ9UKE5 1360 aa20.82■□□□□ 0.92
CD6-201ENST00000313421 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
CD6-201ENST00000313421 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
CD6-201ENST00000313421 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
CD6-201ENST00000313421 CCDC136Q96JN2 1154 aa20.72■□□□□ 0.91
CD6-201ENST00000313421 KANK4Q5T7N3 995 aaPredicted RBP20.7■□□□□ 0.9
CD6-201ENST00000313421 GOLGA3Q08378 1498 aa20.69■□□□□ 0.9
CD6-201ENST00000313421 CLIP1P30622 1438 aa20.67■□□□□ 0.9
CD6-201ENST00000313421 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
CD6-201ENST00000313421 EEA1Q15075 1411 aa20.64■□□□□ 0.9
CD6-201ENST00000313421 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
CD6-201ENST00000313421 FKBP8Q14318 412 aa20.6■□□□□ 0.89
CD6-201ENST00000313421 SALL2Q9Y467 1007 aaPredicted RBP20.58■□□□□ 0.88
CD6-201ENST00000313421 RAPGEF2Q9Y4G8 1499 aa20.57■□□□□ 0.88
CD6-201ENST00000313421 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
CD6-201ENST00000313421 CEP164Q9UPV0 1460 aa20.51■□□□□ 0.87
CD6-201ENST00000313421 FAM50AQ14320 339 aaKnown RBP20.51■□□□□ 0.87
CD6-201ENST00000313421 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
CD6-201ENST00000313421 ARID3CA6NKF2 412 aa20.46■□□□□ 0.87
CD6-201ENST00000313421 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
CD6-201ENST00000313421 SLC24A1O60721 1099 aa20.45■□□□□ 0.86
CD6-201ENST00000313421 NEFLP07196 543 aa20.45■□□□□ 0.86
CD6-201ENST00000313421 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
CD6-201ENST00000313421 SIN3AQ96ST3 1273 aa20.43■□□□□ 0.86
CD6-201ENST00000313421 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.42■□□□□ 0.86
CD6-201ENST00000313421 VPS8Q8N3P4 1428 aa20.41■□□□□ 0.86
CD6-201ENST00000313421 EIF5BO60841 1220 aaKnown RBP20.4■□□□□ 0.86
CD6-201ENST00000313421 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
CD6-201ENST00000313421 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
CD6-201ENST00000313421 RBM19Q9Y4C8 960 aaKnown RBP20.38■□□□□ 0.85
CD6-201ENST00000313421 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
CD6-201ENST00000313421 IRX6P78412 446 aaPredicted RBP20.34■□□□□ 0.85
CD6-201ENST00000313421 UBE2Q2Q8WVN8 375 aa20.34■□□□□ 0.85
CD6-201ENST00000313421 DEKP35659 375 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms