RNA–Protein interactions for RNA: ENST00000313288.8

TACC3-201, Transcript of transforming acidic coiled-coil containing protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TACC3, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TACC3-201ENST00000313288 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
TACC3-201ENST00000313288 SHROOM4Q9ULL8 1493 aa29.7■■■□□ 2.34
TACC3-201ENST00000313288 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
TACC3-201ENST00000313288 MYO15BQ96JP2 1530 aa28.81■■■□□ 2.2
TACC3-201ENST00000313288 HRCP23327 699 aa28.75■■■□□ 2.19
TACC3-201ENST00000313288 PPARGC1BQ86YN6 1023 aaKnown RBP28.63■■■□□ 2.17
TACC3-201ENST00000313288 PCGF6Q9BYE7 350 aa28.6■■■□□ 2.17
TACC3-201ENST00000313288 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
TACC3-201ENST00000313288 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
TACC3-201ENST00000313288 ZCCHC6Q5VYS8 1495 aaKnown RBP28.19■■■□□ 2.1
TACC3-201ENST00000313288 LOC105371045A0A1W2PR82 267 aa28.09■■■□□ 2.09
TACC3-201ENST00000313288 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
TACC3-201ENST00000313288 CCDC180Q9P1Z9 1646 aa27.55■■■□□ 2
TACC3-201ENST00000313288 TRIM26Q12899 539 aaPredicted RBP27.47■■□□□ 1.99
TACC3-201ENST00000313288 EHMT2Q96KQ7 1210 aa27.37■■□□□ 1.97
TACC3-201ENST00000313288 FAM9AQ8IZU1 332 aaPredicted RBP27.24■■□□□ 1.95
TACC3-201ENST00000313288 SCAF1Q9H7N4 1312 aaKnown RBP27.18■■□□□ 1.94
TACC3-201ENST00000313288 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
TACC3-201ENST00000313288 ZEB1P37275 1124 aaPredicted RBP26.86■■□□□ 1.89
TACC3-201ENST00000313288 ABCC9O60706 1549 aa26.74■■□□□ 1.87
TACC3-201ENST00000313288 RSF1Q96T23 1441 aaPredicted RBP26.74■■□□□ 1.87
TACC3-201ENST00000313288 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
TACC3-201ENST00000313288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.69■■□□□ 1.86
TACC3-201ENST00000313288 PELP1Q8IZL8 1130 aaKnown RBP26.68■■□□□ 1.86
TACC3-201ENST00000313288 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
TACC3-201ENST00000313288 NEUROD1Q13562 356 aa26.58■■□□□ 1.85
TACC3-201ENST00000313288 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.84
TACC3-201ENST00000313288 ACIN1Q9UKV3 1341 aaKnown RBP26.44■■□□□ 1.82
TACC3-201ENST00000313288 CCER1Q8TC90 406 aaPredicted RBP26.44■■□□□ 1.82
TACC3-201ENST00000313288 GTF3C3Q9Y5Q9 886 aa26.35■■□□□ 1.81
TACC3-201ENST00000313288 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
TACC3-201ENST00000313288 DIEXFQ68CQ4 756 aaKnown RBP26.25■■□□□ 1.79
TACC3-201ENST00000313288 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
TACC3-201ENST00000313288 YTHDC1Q96MU7 727 aaKnown RBP26.08■■□□□ 1.77
TACC3-201ENST00000313288 WIZO95785 1651 aa26.05■■□□□ 1.76
TACC3-201ENST00000313288 CENPBP07199 599 aaPredicted RBP25.98■■□□□ 1.75
TACC3-201ENST00000313288 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
TACC3-201ENST00000313288 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
TACC3-201ENST00000313288 CEP162Q5TB80 1403 aa25.77■■□□□ 1.72
TACC3-201ENST00000313288 ZNF316A6NFI3 1004 aaPredicted RBP25.76■■□□□ 1.71
TACC3-201ENST00000313288 MIER1Q8N108 512 aa25.75■■□□□ 1.71
TACC3-201ENST00000313288 SOGA1O94964 1423 aa25.75■■□□□ 1.71
TACC3-201ENST00000313288 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
TACC3-201ENST00000313288 HNRNPUL2Q1KMD3 747 aaKnown RBP25.69■■□□□ 1.7
TACC3-201ENST00000313288 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
TACC3-201ENST00000313288 UBTFP17480 764 aaKnown RBP25.67■■□□□ 1.7
TACC3-201ENST00000313288 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.691e-6■■■■□ 21.8
TACC3-201ENST00000313288 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
TACC3-201ENST00000313288 RANGAP1P46060 587 aaPredicted RBP25.5■■□□□ 1.67
TACC3-201ENST00000313288 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
TACC3-201ENST00000313288 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
TACC3-201ENST00000313288 NACADO15069 1562 aa25.45■■□□□ 1.66
TACC3-201ENST00000313288 SMARCA2P51531 1590 aa25.34■■□□□ 1.65
TACC3-201ENST00000313288 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
TACC3-201ENST00000313288 MYT1Q01538 1121 aa25.31■■□□□ 1.64
TACC3-201ENST00000313288 GOLGA3Q08378 1498 aa25.22■■□□□ 1.63
TACC3-201ENST00000313288 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
TACC3-201ENST00000313288 CLIP1P30622 1438 aa25.12■■□□□ 1.61
TACC3-201ENST00000313288 SUPT16HQ9Y5B9 1047 aaKnown RBP25.1■■□□□ 1.61
TACC3-201ENST00000313288 EEA1Q15075 1411 aa25.06■■□□□ 1.6
TACC3-201ENST00000313288 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
TACC3-201ENST00000313288 APLP2Q06481 763 aa25.02■■□□□ 1.6
TACC3-201ENST00000313288 KCNH8Q96L42 1107 aa25.02■■□□□ 1.6
TACC3-201ENST00000313288 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
TACC3-201ENST00000313288 RAPGEF2Q9Y4G8 1499 aa24.99■■□□□ 1.59
TACC3-201ENST00000313288 VPS8Q8N3P4 1428 aa24.98■■□□□ 1.59
TACC3-201ENST00000313288 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
TACC3-201ENST00000313288 DHX57Q6P158 1386 aaKnown RBP24.92■■□□□ 1.58
TACC3-201ENST00000313288 TSHZ2Q9NRE2 1034 aa24.92■■□□□ 1.58
TACC3-201ENST00000313288 BCANQ96GW7 911 aa24.91■■□□□ 1.58
TACC3-201ENST00000313288 KANK4Q5T7N3 995 aaPredicted RBP24.91■■□□□ 1.58
TACC3-201ENST00000313288 ITGAEP38570 1179 aa24.87■■□□□ 1.57
TACC3-201ENST00000313288 KIF21BO75037 1637 aa24.86■■□□□ 1.57
TACC3-201ENST00000313288 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
TACC3-201ENST00000313288 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
TACC3-201ENST00000313288 BAZ1BQ9UIG0 1483 aaKnown RBP24.63■■□□□ 1.53
TACC3-201ENST00000313288 ANP32EQ9BTT0 268 aa24.63■■□□□ 1.53
TACC3-201ENST00000313288 HIRIP3Q9BW71 556 aaPredicted RBP24.62■■□□□ 1.53
TACC3-201ENST00000313288 FKBP8Q14318 412 aa24.59■■□□□ 1.53
TACC3-201ENST00000313288 DDX10Q13206 875 aaKnown RBP24.56■■□□□ 1.52
TACC3-201ENST00000313288 CLSPNQ9HAW4 1339 aa24.55■■□□□ 1.52
TACC3-201ENST00000313288 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
TACC3-201ENST00000313288 SIN3AQ96ST3 1273 aa24.51■■□□□ 1.51
TACC3-201ENST00000313288 TRIM52Q96A61 297 aa24.46■■□□□ 1.51
TACC3-201ENST00000313288 CCNB3Q8WWL7 1395 aa24.44■■□□□ 1.5
TACC3-201ENST00000313288 RRBP1Q9P2E9 1410 aaKnown RBP24.44■■□□□ 1.5
TACC3-201ENST00000313288 RAB3GAP2Q9H2M9 1393 aa24.43■■□□□ 1.5
TACC3-201ENST00000313288 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
TACC3-201ENST00000313288 BCL11AQ9H165 835 aa24.42■■□□□ 1.5
TACC3-201ENST00000313288 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
TACC3-201ENST00000313288 PRXQ9BXM0 1461 aa24.39■■□□□ 1.5
TACC3-201ENST00000313288 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
TACC3-201ENST00000313288 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
TACC3-201ENST00000313288 WDR97A6NE52 1622 aa24.36■■□□□ 1.49
TACC3-201ENST00000313288 RBM19Q9Y4C8 960 aaKnown RBP24.33■■□□□ 1.49
TACC3-201ENST00000313288 ARHGAP35Q9NRY4 1499 aa24.31■■□□□ 1.48
TACC3-201ENST00000313288 FAM50AQ14320 339 aaKnown RBP24.29■■□□□ 1.48
TACC3-201ENST00000313288 CUX2O14529 1486 aa24.28■■□□□ 1.48
TACC3-201ENST00000313288 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
TACC3-201ENST00000313288 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms