RNA–Protein interactions for RNA: ENST00000312553.9

PODN-201, Transcript of podocan, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PODN, Length 3,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODN-201ENST00000312553 NISCHQ9Y2I1 1504 aa30.45■■■□□ 2.47
PODN-201ENST00000312553 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
PODN-201ENST00000312553 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
PODN-201ENST00000312553 HRCP23327 699 aa25.95■■□□□ 1.74
PODN-201ENST00000312553 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
PODN-201ENST00000312553 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
PODN-201ENST00000312553 ZCCHC6Q5VYS8 1495 aaKnown RBP25.8■■□□□ 1.72
PODN-201ENST00000312553 PCGF6Q9BYE7 350 aa25.77■■□□□ 1.72
PODN-201ENST00000312553 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
PODN-201ENST00000312553 PPARGC1BQ86YN6 1023 aaKnown RBP25.56■■□□□ 1.68
PODN-201ENST00000312553 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
PODN-201ENST00000312553 LOC105371045A0A1W2PR82 267 aa25.34■■□□□ 1.65
PODN-201ENST00000312553 DCAF1Q9Y4B6 1507 aa25.11■■□□□ 1.61
PODN-201ENST00000312553 TRIM26Q12899 539 aaPredicted RBP24.97■■□□□ 1.59
PODN-201ENST00000312553 PELP1Q8IZL8 1130 aaKnown RBP24.92■■□□□ 1.58
PODN-201ENST00000312553 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
PODN-201ENST00000312553 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
PODN-201ENST00000312553 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
PODN-201ENST00000312553 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
PODN-201ENST00000312553 ABCC9O60706 1549 aa24.41■■□□□ 1.5
PODN-201ENST00000312553 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
PODN-201ENST00000312553 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
PODN-201ENST00000312553 SCRIBQ14160 1630 aa24.26■■□□□ 1.47
PODN-201ENST00000312553 RB1CC1Q8TDY2 1594 aa24.21■■□□□ 1.47
PODN-201ENST00000312553 MYT1Q01538 1121 aa24.19■■□□□ 1.46
PODN-201ENST00000312553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
PODN-201ENST00000312553 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
PODN-201ENST00000312553 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
PODN-201ENST00000312553 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
PODN-201ENST00000312553 ACIN1Q9UKV3 1341 aaKnown RBP23.86■■□□□ 1.41
PODN-201ENST00000312553 TTBK1Q5TCY1 1321 aaPredicted RBP23.85■■□□□ 1.41
PODN-201ENST00000312553 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
PODN-201ENST00000312553 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
PODN-201ENST00000312553 WIZO95785 1651 aa23.71■■□□□ 1.39
PODN-201ENST00000312553 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.38
PODN-201ENST00000312553 CENPBP07199 599 aaPredicted RBP23.62■■□□□ 1.37
PODN-201ENST00000312553 NACADO15069 1562 aa23.48■■□□□ 1.35
PODN-201ENST00000312553 ABCC8Q09428 1581 aa23.45■■□□□ 1.34
PODN-201ENST00000312553 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
PODN-201ENST00000312553 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
PODN-201ENST00000312553 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
PODN-201ENST00000312553 YTHDC1Q96MU7 727 aaKnown RBP23.41■■□□□ 1.34
PODN-201ENST00000312553 UBTFP17480 764 aaKnown RBP23.39■■□□□ 1.34
PODN-201ENST00000312553 EIF4G1Q04637 1599 aaKnown RBP23.39■■□□□ 1.33
PODN-201ENST00000312553 WRNQ14191 1432 aaPredicted RBP eCLIP23.39■■□□□ 1.33
PODN-201ENST00000312553 ZNF316A6NFI3 1004 aaPredicted RBP23.38■■□□□ 1.33
PODN-201ENST00000312553 SOGA1O94964 1423 aa23.37■■□□□ 1.33
PODN-201ENST00000312553 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
PODN-201ENST00000312553 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
PODN-201ENST00000312553 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
PODN-201ENST00000312553 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
PODN-201ENST00000312553 MIER1Q8N108 512 aa23.21■■□□□ 1.31
PODN-201ENST00000312553 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
PODN-201ENST00000312553 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
PODN-201ENST00000312553 EEA1Q15075 1411 aa23.06■■□□□ 1.28
PODN-201ENST00000312553 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
PODN-201ENST00000312553 GOLGA3Q08378 1498 aa23.04■■□□□ 1.28
PODN-201ENST00000312553 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
PODN-201ENST00000312553 APLP2Q06481 763 aa22.93■■□□□ 1.26
PODN-201ENST00000312553 CLIP1P30622 1438 aa22.89■■□□□ 1.26
PODN-201ENST00000312553 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
PODN-201ENST00000312553 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
PODN-201ENST00000312553 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
PODN-201ENST00000312553 SYNJ1O43426 1573 aa22.74■■□□□ 1.23
PODN-201ENST00000312553 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
PODN-201ENST00000312553 RAPGEF2Q9Y4G8 1499 aa22.71■■□□□ 1.23
PODN-201ENST00000312553 KIF21BO75037 1637 aa22.7■■□□□ 1.22
PODN-201ENST00000312553 BCL11AQ9H165 835 aa22.66■■□□□ 1.22
PODN-201ENST00000312553 SUPT16HQ9Y5B9 1047 aaKnown RBP22.63■■□□□ 1.21
PODN-201ENST00000312553 DHX57Q6P158 1386 aaKnown RBP22.61■■□□□ 1.21
PODN-201ENST00000312553 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
PODN-201ENST00000312553 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
PODN-201ENST00000312553 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
PODN-201ENST00000312553 ITGAEP38570 1179 aa22.5■■□□□ 1.19
PODN-201ENST00000312553 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
PODN-201ENST00000312553 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
PODN-201ENST00000312553 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
PODN-201ENST00000312553 PRKCSHP14314 528 aaPredicted RBP22.43■■□□□ 1.18
PODN-201ENST00000312553 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
PODN-201ENST00000312553 TSHZ2Q9NRE2 1034 aa22.4■■□□□ 1.18
PODN-201ENST00000312553 ARAP1Q96P48 1450 aa22.39■■□□□ 1.17
PODN-201ENST00000312553 BCANQ96GW7 911 aa22.33■■□□□ 1.16
PODN-201ENST00000312553 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
PODN-201ENST00000312553 PRXQ9BXM0 1461 aa22.3■■□□□ 1.16
PODN-201ENST00000312553 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
PODN-201ENST00000312553 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
PODN-201ENST00000312553 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
PODN-201ENST00000312553 DDX10Q13206 875 aaKnown RBP22.23■■□□□ 1.15
PODN-201ENST00000312553 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
PODN-201ENST00000312553 FKBP8Q14318 412 aa22.2■■□□□ 1.14
PODN-201ENST00000312553 ANP32EQ9BTT0 268 aa22.19■■□□□ 1.14
PODN-201ENST00000312553 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
PODN-201ENST00000312553 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
PODN-201ENST00000312553 CUX2O14529 1486 aa22.16■■□□□ 1.14
PODN-201ENST00000312553 HIRIP3Q9BW71 556 aaPredicted RBP22.15■■□□□ 1.14
PODN-201ENST00000312553 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
PODN-201ENST00000312553 KIF27Q86VH2 1401 aa22.13■■□□□ 1.13
PODN-201ENST00000312553 MAPKBP1O60336 1514 aa22.09■■□□□ 1.13
PODN-201ENST00000312553 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
PODN-201ENST00000312553 CUX1P39880 1505 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms