RNA–Protein interactions for RNA: ENST00000309865.11

SMG1P1-202, Transcript of SMG1 pseudogene 1, humanhuman

BASIC

Gene SMG1P1, Length 4,223 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P1-202ENST00000309865 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
SMG1P1-202ENST00000309865 CCDC180Q9P1Z9 1646 aa17.04■□□□□ 0.32
SMG1P1-202ENST00000309865 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
SMG1P1-202ENST00000309865 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
SMG1P1-202ENST00000309865 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.15
SMG1P1-202ENST00000309865 ABCC9O60706 1549 aa15.98■□□□□ 0.15
SMG1P1-202ENST00000309865 NACADO15069 1562 aa15.85■□□□□ 0.13
SMG1P1-202ENST00000309865 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
SMG1P1-202ENST00000309865 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
SMG1P1-202ENST00000309865 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
SMG1P1-202ENST00000309865 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
SMG1P1-202ENST00000309865 BICRAQ9NZM4 1560 aa15.31■□□□□ 0.04
SMG1P1-202ENST00000309865 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.03
SMG1P1-202ENST00000309865 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMG1P1-202ENST00000309865 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
SMG1P1-202ENST00000309865 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
SMG1P1-202ENST00000309865 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
SMG1P1-202ENST00000309865 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
SMG1P1-202ENST00000309865 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
SMG1P1-202ENST00000309865 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
SMG1P1-202ENST00000309865 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
SMG1P1-202ENST00000309865 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
SMG1P1-202ENST00000309865 WIZO95785 1651 aa14.63□□□□□ -0.07
SMG1P1-202ENST00000309865 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
SMG1P1-202ENST00000309865 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
SMG1P1-202ENST00000309865 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
SMG1P1-202ENST00000309865 NCAPD3P42695 1498 aa14.6□□□□□ -0.07
SMG1P1-202ENST00000309865 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
SMG1P1-202ENST00000309865 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
SMG1P1-202ENST00000309865 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
SMG1P1-202ENST00000309865 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
SMG1P1-202ENST00000309865 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
SMG1P1-202ENST00000309865 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
SMG1P1-202ENST00000309865 CFTRP13569 1480 aa14.18□□□□□ -0.14
SMG1P1-202ENST00000309865 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
SMG1P1-202ENST00000309865 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
SMG1P1-202ENST00000309865 NESP48681 1621 aa14□□□□□ -0.17
SMG1P1-202ENST00000309865 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
SMG1P1-202ENST00000309865 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
SMG1P1-202ENST00000309865 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
SMG1P1-202ENST00000309865 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
SMG1P1-202ENST00000309865 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
SMG1P1-202ENST00000309865 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
SMG1P1-202ENST00000309865 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
SMG1P1-202ENST00000309865 CUX1P39880 1505 aa13.85□□□□□ -0.19
SMG1P1-202ENST00000309865 DNMBPQ6XZF7 1577 aa13.85□□□□□ -0.19
SMG1P1-202ENST00000309865 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
SMG1P1-202ENST00000309865 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
SMG1P1-202ENST00000309865 WDR62O43379 1518 aa13.84□□□□□ -0.19
SMG1P1-202ENST00000309865 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
SMG1P1-202ENST00000309865 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
SMG1P1-202ENST00000309865 MRC2Q9UBG0 1479 aa13.82□□□□□ -0.2
SMG1P1-202ENST00000309865 TOPBP1Q92547 1522 aa13.79□□□□□ -0.2
SMG1P1-202ENST00000309865 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
SMG1P1-202ENST00000309865 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
SMG1P1-202ENST00000309865 ERCC6Q03468 1493 aa13.7□□□□□ -0.22
SMG1P1-202ENST00000309865 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
SMG1P1-202ENST00000309865 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
SMG1P1-202ENST00000309865 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
SMG1P1-202ENST00000309865 CUX2O14529 1486 aa13.67□□□□□ -0.22
SMG1P1-202ENST00000309865 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
SMG1P1-202ENST00000309865 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
SMG1P1-202ENST00000309865 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
SMG1P1-202ENST00000309865 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
SMG1P1-202ENST00000309865 SOGA1O94964 1423 aa13.57□□□□□ -0.24
SMG1P1-202ENST00000309865 EEA1Q15075 1411 aa13.57□□□□□ -0.24
SMG1P1-202ENST00000309865 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
SMG1P1-202ENST00000309865 ERICH3Q5RHP9 1530 aa13.51□□□□□ -0.25
SMG1P1-202ENST00000309865 PBRM1Q86U86 1689 aa13.51□□□□□ -0.25
SMG1P1-202ENST00000309865 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
SMG1P1-202ENST00000309865 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
SMG1P1-202ENST00000309865 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
SMG1P1-202ENST00000309865 CUL7Q14999 1698 aa13.47□□□□□ -0.25
SMG1P1-202ENST00000309865 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.25
SMG1P1-202ENST00000309865 KIF21BO75037 1637 aa13.46□□□□□ -0.25
SMG1P1-202ENST00000309865 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
SMG1P1-202ENST00000309865 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
SMG1P1-202ENST00000309865 IGF1RP08069 1367 aa13.43□□□□□ -0.26
SMG1P1-202ENST00000309865 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
SMG1P1-202ENST00000309865 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
SMG1P1-202ENST00000309865 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■□□□□ 10.6
SMG1P1-202ENST00000309865 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
SMG1P1-202ENST00000309865 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
SMG1P1-202ENST00000309865 CSRNP3Q8WYN3 585 aa13.34□□□□□ -0.27
SMG1P1-202ENST00000309865 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
SMG1P1-202ENST00000309865 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
SMG1P1-202ENST00000309865 RAPGEF2Q9Y4G8 1499 aa13.31□□□□□ -0.28
SMG1P1-202ENST00000309865 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
SMG1P1-202ENST00000309865 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
SMG1P1-202ENST00000309865 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
SMG1P1-202ENST00000309865 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
SMG1P1-202ENST00000309865 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
SMG1P1-202ENST00000309865 CHD1O14646 1710 aa13.26□□□□□ -0.29
SMG1P1-202ENST00000309865 NUP160Q12769 1436 aa13.25□□□□□ -0.29
SMG1P1-202ENST00000309865 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
SMG1P1-202ENST00000309865 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
SMG1P1-202ENST00000309865 CLASP1Q7Z460 1538 aa13.19□□□□□ -0.3
SMG1P1-202ENST00000309865 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
SMG1P1-202ENST00000309865 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
SMG1P1-202ENST00000309865 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms