RNA–Protein interactions for RNA: ENST00000309865.11

SMG1P1-202, Transcript of SMG1 pseudogene 1, humanhuman

BASIC

Gene SMG1P1, Length 4,223 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P1-202ENST00000309865 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
SMG1P1-202ENST00000309865 CCDC180Q9P1Z9 1646 aa17.04■□□□□ 0.32
SMG1P1-202ENST00000309865 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
SMG1P1-202ENST00000309865 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
SMG1P1-202ENST00000309865 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.15
SMG1P1-202ENST00000309865 ABCC9O60706 1549 aa15.98■□□□□ 0.15
SMG1P1-202ENST00000309865 NACADO15069 1562 aa15.85■□□□□ 0.13
SMG1P1-202ENST00000309865 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
SMG1P1-202ENST00000309865 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
SMG1P1-202ENST00000309865 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
SMG1P1-202ENST00000309865 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
SMG1P1-202ENST00000309865 BICRAQ9NZM4 1560 aa15.31■□□□□ 0.04
SMG1P1-202ENST00000309865 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.03
SMG1P1-202ENST00000309865 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMG1P1-202ENST00000309865 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
SMG1P1-202ENST00000309865 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
SMG1P1-202ENST00000309865 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
SMG1P1-202ENST00000309865 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
SMG1P1-202ENST00000309865 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
SMG1P1-202ENST00000309865 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
SMG1P1-202ENST00000309865 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
SMG1P1-202ENST00000309865 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
SMG1P1-202ENST00000309865 WIZO95785 1651 aa14.63□□□□□ -0.07
SMG1P1-202ENST00000309865 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
SMG1P1-202ENST00000309865 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
SMG1P1-202ENST00000309865 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
SMG1P1-202ENST00000309865 NCAPD3P42695 1498 aa14.6□□□□□ -0.07
SMG1P1-202ENST00000309865 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
SMG1P1-202ENST00000309865 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
SMG1P1-202ENST00000309865 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
SMG1P1-202ENST00000309865 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
SMG1P1-202ENST00000309865 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
SMG1P1-202ENST00000309865 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
SMG1P1-202ENST00000309865 CFTRP13569 1480 aa14.18□□□□□ -0.14
SMG1P1-202ENST00000309865 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
SMG1P1-202ENST00000309865 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
SMG1P1-202ENST00000309865 NESP48681 1621 aa14□□□□□ -0.17
SMG1P1-202ENST00000309865 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
SMG1P1-202ENST00000309865 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
SMG1P1-202ENST00000309865 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
SMG1P1-202ENST00000309865 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
SMG1P1-202ENST00000309865 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
SMG1P1-202ENST00000309865 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
SMG1P1-202ENST00000309865 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
SMG1P1-202ENST00000309865 CUX1P39880 1505 aa13.85□□□□□ -0.19
SMG1P1-202ENST00000309865 DNMBPQ6XZF7 1577 aa13.85□□□□□ -0.19
SMG1P1-202ENST00000309865 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
SMG1P1-202ENST00000309865 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
SMG1P1-202ENST00000309865 WDR62O43379 1518 aa13.84□□□□□ -0.19
SMG1P1-202ENST00000309865 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
SMG1P1-202ENST00000309865 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
SMG1P1-202ENST00000309865 MRC2Q9UBG0 1479 aa13.82□□□□□ -0.2
SMG1P1-202ENST00000309865 TOPBP1Q92547 1522 aa13.79□□□□□ -0.2
SMG1P1-202ENST00000309865 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
SMG1P1-202ENST00000309865 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
SMG1P1-202ENST00000309865 ERCC6Q03468 1493 aa13.7□□□□□ -0.22
SMG1P1-202ENST00000309865 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
SMG1P1-202ENST00000309865 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
SMG1P1-202ENST00000309865 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
SMG1P1-202ENST00000309865 CUX2O14529 1486 aa13.67□□□□□ -0.22
SMG1P1-202ENST00000309865 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
SMG1P1-202ENST00000309865 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
SMG1P1-202ENST00000309865 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
SMG1P1-202ENST00000309865 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
SMG1P1-202ENST00000309865 SOGA1O94964 1423 aa13.57□□□□□ -0.24
SMG1P1-202ENST00000309865 EEA1Q15075 1411 aa13.57□□□□□ -0.24
SMG1P1-202ENST00000309865 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
SMG1P1-202ENST00000309865 ERICH3Q5RHP9 1530 aa13.51□□□□□ -0.25
SMG1P1-202ENST00000309865 PBRM1Q86U86 1689 aa13.51□□□□□ -0.25
SMG1P1-202ENST00000309865 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
SMG1P1-202ENST00000309865 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
SMG1P1-202ENST00000309865 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
SMG1P1-202ENST00000309865 CUL7Q14999 1698 aa13.47□□□□□ -0.25
SMG1P1-202ENST00000309865 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.25
SMG1P1-202ENST00000309865 KIF21BO75037 1637 aa13.46□□□□□ -0.25
SMG1P1-202ENST00000309865 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
SMG1P1-202ENST00000309865 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
SMG1P1-202ENST00000309865 IGF1RP08069 1367 aa13.43□□□□□ -0.26
SMG1P1-202ENST00000309865 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
SMG1P1-202ENST00000309865 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
SMG1P1-202ENST00000309865 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■□□□□ 10.6
SMG1P1-202ENST00000309865 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
SMG1P1-202ENST00000309865 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
SMG1P1-202ENST00000309865 CSRNP3Q8WYN3 585 aa13.34□□□□□ -0.27
SMG1P1-202ENST00000309865 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
SMG1P1-202ENST00000309865 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
SMG1P1-202ENST00000309865 RAPGEF2Q9Y4G8 1499 aa13.31□□□□□ -0.28
SMG1P1-202ENST00000309865 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
SMG1P1-202ENST00000309865 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
SMG1P1-202ENST00000309865 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
SMG1P1-202ENST00000309865 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
SMG1P1-202ENST00000309865 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
SMG1P1-202ENST00000309865 CHD1O14646 1710 aa13.26□□□□□ -0.29
SMG1P1-202ENST00000309865 NUP160Q12769 1436 aa13.25□□□□□ -0.29
SMG1P1-202ENST00000309865 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
SMG1P1-202ENST00000309865 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
SMG1P1-202ENST00000309865 CLASP1Q7Z460 1538 aa13.19□□□□□ -0.3
SMG1P1-202ENST00000309865 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
SMG1P1-202ENST00000309865 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
SMG1P1-202ENST00000309865 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms